Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NT5E Gene 0 79.67 3.81 19.00 12.63 40.67 19.33 23.15 33.16 15.22 5.77 13.15 0.80 1.44 34.31 51.69 13.31 208.80 2.19 46.47 6.51 610.69 1883.43 957.26 2 369647 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 369651 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 369646 Transcript 0 4.42 0.29 2.97 1.19 0.80 0.00 1.92 2.49 1.22 0.00 3.18 0.00 0.00 5.38 10.69 0.00 22.29 0.00 7.56 1.69 11.39 129.24 15.88 5 257770 Transcript 0 30.51 1.02 6.16 5.51 14.43 4.97 6.73 7.06 8.07 3.18 7.42 0.00 0.00 19.54 33.38 7.65 135.76 0.00 30.92 2.81 727.74 913.10 740.27 6 416334 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 437581 Transcript 0 1.48 0.52 0.00 0.52 0.69 0.47 1.22 0.63 1.08 0.00 0.00 0.00 1.98 1.66 0.52 0.76 3.75 0.00 0.82 1.09 12.11 15.66 23.82 8 IG16_AR1 ActiveIntergenicRegion 0 0.46 0.00 0.80 0.00 0.00 1.36 1.30 0.00 0.59 0.00 0.00 0.00 0.00 1.37 2.86 0.00 11.39 0.00 2.08 0.34 1.31 13.17 5.92 9 ER1a ExonRegion 0 1.15 0.20 1.28 0.00 0.93 2.62 2.50 1.15 0.55 0.40 5.18 0.00 0.00 10.15 5.05 4.39 38.76 0.17 10.01 2.27 55.46 72.02 117.81 10 E1_Ab KnownBoundary 0 16.45 0.00 0.00 1.73 15.70 17.89 12.19 6.78 0.00 3.09 20.16 0.00 0.00 32.84 8.90 3.33 141.09 10.45 18.07 5.82 208.07 207.03 202.99 11 ER1b ExonRegion 0 10.00 2.98 6.62 1.82 7.59 12.59 4.91 7.53 4.42 4.09 13.10 0.00 0.00 42.55 30.35 11.54 184.31 4.25 29.48 7.35 634.08 570.60 666.01 12 E1_Da NovelBoundary 1 0.00 0.00 4.61 0.00 3.82 5.79 4.50 4.97 0.00 1.10 11.79 0.00 6.82 32.67 17.80 24.18 75.83 2.57 25.51 0.00 58.19 77.52 133.76 13 E1a_E2a KnownJunction 0 31.41 3.22 4.67 5.56 20.54 5.45 1.85 10.64 7.70 2.79 7.74 0.00 0.00 33.55 22.99 15.30 187.10 0.00 33.79 11.95 1103.65 1083.10 939.16 14 I1_AR1 ActiveIntronRegion 1 25.83 0.67 3.45 5.30 12.76 11.22 22.72 7.82 3.63 0.77 15.80 0.00 0.35 17.48 16.80 10.14 70.78 3.06 27.60 5.23 37.14 148.32 97.44 15 ER2a ExonRegion 0 34.70 5.98 9.98 8.50 26.07 11.57 17.21 29.43 16.40 3.13 15.53 0.00 0.00 51.95 52.26 14.13 258.49 0.65 45.20 9.02 926.50 2132.74 1058.89 16 E2a_E3a KnownJunction 0 53.42 0.00 13.87 16.05 56.79 10.28 28.66 30.68 20.60 5.64 9.74 0.00 0.00 88.23 105.20 24.95 316.60 2.11 48.57 6.39 569.28 3008.59 1387.49 17 ER3a ExonRegion 0 56.59 11.00 14.61 10.02 46.19 14.73 30.73 28.98 24.85 5.28 22.57 0.00 1.23 58.03 58.95 21.38 329.34 3.36 46.00 8.26 899.05 2430.20 1274.38 18 E3_Ab KnownBoundary 0 53.19 19.14 11.38 10.55 46.77 14.76 36.26 14.13 10.30 7.79 7.42 0.00 0.00 43.26 53.53 15.98 261.71 6.96 29.55 8.88 1060.22 1843.86 1009.76 19 ER3b ExonRegion 0 40.02 7.95 8.08 10.35 30.83 12.92 31.96 25.42 14.04 8.08 9.31 0.00 3.20 57.55 69.10 21.21 323.86 2.73 46.55 6.04 1159.20 2075.94 1203.09 20 E3_Da KnownBoundary 0 0.00 3.35 4.85 0.00 0.00 0.00 10.82 8.79 1.48 0.00 9.53 0.00 0.00 12.13 13.35 0.00 49.46 0.00 18.17 2.94 11.74 320.31 26.80 21 E3a_E4a KnownJunction 0 17.04 2.83 3.02 12.29 36.25 15.79 9.58 30.56 18.11 7.52 9.53 0.00 6.82 74.05 67.12 24.27 343.90 0.00 75.30 3.26 1383.44 2117.58 1491.63 22 ER3c ExonRegion 0 4.42 0.29 2.97 1.19 0.80 0.00 1.92 2.49 1.22 0.00 3.18 0.00 0.00 5.38 10.69 0.00 22.29 0.00 7.56 1.69 11.39 129.24 15.88 23 ER4a ExonRegion 0 30.70 2.00 12.25 9.38 25.81 18.70 14.51 29.50 18.02 8.42 13.17 1.12 1.55 56.67 39.73 19.78 357.27 4.01 58.16 4.80 1348.90 2243.03 1559.36 24 E4_Ab KnownBoundary 0 41.79 3.22 18.92 11.09 40.75 21.18 33.96 45.92 17.36 2.98 12.53 0.00 0.00 58.63 37.46 39.73 409.91 6.63 138.26 2.81 1252.78 3139.07 2201.00 25 ER4b ExonRegion 0 41.60 2.38 15.19 10.44 41.05 25.52 22.20 41.48 16.94 3.34 13.20 0.74 3.48 74.52 51.97 23.35 418.65 6.28 104.84 3.47 1237.16 2678.81 1987.94 26 E4a_E5a KnownJunction 0 50.68 2.63 19.04 7.92 42.53 44.58 21.15 34.91 19.47 4.46 14.06 0.00 6.82 68.57 63.66 15.64 400.28 4.68 80.47 8.44 1215.96 2366.06 1879.35 27 ER5a ExonRegion 0 57.28 2.90 15.32 11.64 26.84 31.40 19.90 39.67 19.49 8.11 15.31 2.18 1.54 48.21 50.59 13.13 383.46 7.52 68.37 10.46 1124.11 2549.97 1697.25 28 E5a_E6a KnownJunction 0 76.38 3.09 16.82 10.29 61.12 59.68 16.38 39.39 20.23 6.55 24.69 0.00 6.82 63.10 53.90 17.35 394.95 2.03 127.72 9.46 1386.22 2478.73 1797.83 29 ER6a ExonRegion 0 60.00 3.63 10.94 7.95 28.80 31.71 24.46 27.12 19.00 8.77 10.80 1.72 2.35 43.13 51.40 13.07 302.65 2.68 72.30 6.30 1378.50 2099.72 1544.56 30 E6a_E7a KnownJunction 0 52.45 2.76 7.33 11.32 30.98 42.70 25.22 28.05 22.89 9.80 7.53 0.00 0.00 39.73 52.41 7.78 296.21 4.35 100.52 5.05 1420.39 2225.96 1800.14 31 E6a_E9a KnownJunction 0 3.19 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.53 10.38 4.36 34.60 0.00 0.00 0.00 38.12 136.73 125.57 32 ER7a ExonRegion 0 36.45 0.54 7.35 15.55 21.89 31.15 23.11 20.43 17.32 6.22 15.59 0.00 1.31 39.35 51.70 10.98 266.54 3.84 62.09 5.11 1379.68 1850.61 1489.21 33 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.36 0.00 0.00 34 E7a_E9a KnownJunction 0 58.90 0.00 12.33 11.02 28.86 9.94 13.47 14.13 16.15 6.37 14.85 0.00 0.00 39.08 66.75 15.30 271.53 0.00 61.84 5.62 1455.47 1792.86 1473.20 35 ER8a ExonRegion 0 0.32 0.00 0.00 0.00 0.00 1.79 1.77 1.48 0.72 0.00 0.00 0.00 0.00 0.00 1.14 1.65 2.87 0.00 3.53 0.00 19.35 11.23 16.69 36 E8_Da KnownBoundary 0 3.33 0.00 0.00 0.00 0.00 0.00 8.08 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.46 0.00 0.00 0.00 11.74 16.04 43.02 37 ER8b ExonRegion 0 1.48 0.52 0.00 0.52 0.69 0.47 1.22 0.63 1.08 0.00 0.00 0.00 1.98 1.66 0.52 0.76 3.75 0.00 0.82 1.09 12.11 15.66 23.82 38 ER9a ExonRegion 0 67.95 6.07 15.28 12.30 37.32 27.73 21.83 24.35 19.43 6.37 17.34 0.00 1.06 42.46 58.50 19.18 302.33 3.70 71.71 5.77 1151.80 2072.17 1590.49 39 E9_Da NovelBoundary 0 37.93 3.35 27.94 9.36 29.63 53.55 18.86 13.47 16.81 2.42 4.90 0.00 0.00 22.54 18.05 17.86 206.36 1.74 47.15 3.00 520.84 1433.41 885.64 40 E9b_E10a KnownJunction 0 73.12 0.00 38.23 19.18 53.06 29.81 31.66 28.05 25.95 6.07 17.53 0.00 0.00 31.43 32.39 12.22 317.16 0.00 85.27 5.56 820.09 2732.48 1165.46 41 ER9b ExonRegion 0 59.13 1.27 30.48 13.71 41.81 41.26 28.30 29.71 24.08 3.30 14.13 0.00 0.00 30.15 38.08 19.32 301.62 1.27 73.06 4.26 808.35 2422.22 1179.98 42 ER10a ExonRegion 0 152.98 5.19 34.58 22.15 73.63 27.36 38.36 57.07 22.36 8.59 16.60 1.50 2.35 36.95 79.15 17.06 239.19 1.96 60.85 8.43 555.84 2857.84 1156.65 43 ER10b ExonRegion 0 2.12 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.34 7.34