Summary page for 'G6pd2' (ENSMUSG00000083703) - Project: Morgen


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Basic Gene Stats

Species: Mouse
Gene Name: 'G6pd2' (HUGO: N/A)
ALEXA Gene ID: 30754 (ALEXA_mm_54_37g)
EnsEMBL Gene ID: ENSMUSG00000083703
Entrez Gene Record(s): N/A
Ensembl Gene Record: ENSMUSG00000083703
Evidence: Known Gene
Gene Type: processed_pseudogene
Location: chr5 62200123-62201664 (+): N/A
Size (bp): 1542
Description: NA



Data links for each library (displays expression data in UCSC Genome Browser)

Comparison: MM0472_vs_MM0490
EmbryonicLiver (MM0490) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)
AdultLiver (MM0472) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)

Comparison: MM0472_vs_MM0581
AdultLiver (MM0472) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)
DefEndo (MM0581) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)

Comparison: MM0581_vs_MM0490
EmbryonicLiver (MM0490) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)
DefEndo (MM0581) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)

Comparison: MM0564_vs_MM0566
HeartE11 (MM0566) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)
HeartE12 (MM0564) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)

Comparison: MM0571_vs_MM0570
Aorta (MM0570) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)
Artery (MM0571) has 0 total reads for 'G6pd2'. UCSC data links: (C | P)



Link to other genes in the same chromosome region as 'G6pd2'

chr5_8



Features defined for this gene: 2

Gene: 1
Transcript: 1
ExonRegion: 1



Summary of transcript specific features for 'G6pd2' (ENSMUSG00000083703)

ENSMUST00000122002:ER1a


Summary of known expressed features

Expressed above background

LibraryExon Regions
(Expressed/Total)
Known Junctions
(Expressed/Total)
EmbryonicLiver:0/10/0
AdultLiver:0/10/0
HeartE11:0/10/0
HeartE12:0/10/0
Aorta:0/10/0
Artery:0/10/0
DefEndo:0/10/0

Detected at any level above 0

LibraryExon Regions
(Detected/Total)
Known Junctions
(Detected/Total)
EmbryonicLiver:0/10/0
AdultLiver:0/10/0
HeartE11:0/10/0
HeartE12:0/10/0
Aorta:0/10/0
Artery:0/10/0
DefEndo:0/10/0


Normalized expression data for each known or novel expressed feature of 'G6pd2'

The following table summarizes the expression values of all known features of the gene 'G6pd2' in each library. Known features (i.e. those that correspond to one or more EnsEMBL transcripts) are included regardless of their expression level. Novel features are only reported in this table if they are expressed above the level of intergenic background noise. The 'FID' column reports the unique Feature ID for the gene, transcript, exon region, exon junction, etc. The 'Name' column reports the Feature Name for the feature (e.g. E5a_E6a is the name of an exon junction corresponding to the connection of exons 5 and 6). The 'Type' column reports the type of the feature and may be one of the following: Gene, Transcript, Exon Region, Known Junction, Novel Junction, Known Boundary, Novel Boundary, Silent or Active Intronic Regions, and Silent or Active Intergenic Regions (see our manuscript for more details). The 'Base Count' column reports the number of nucleotide bases for the feature followed by the percent of these that do NOT correspond to repeats and the percent that are known to be protein coding in one or more EnsEMBL transcripts. The 'Supporting ESTs/mRNAs' column reports the number of ESTs and mRNAs that when aligned to the human genome support the expression of a feature (i.e. the sequence alignment coordinates match an exon junction or boundaries of an exon, retained intron, etc.). The 'Conserved Species' column reports the number of 'other' species for which there was at least 1 supporting EST/mRNA alignment. Finally, the remaining columns report the log2 expression value for each feature in each library. Bold values indicate expression above background. Each expression value is also a hyperlink to a view of the feature's corresponding genomic region in the UCSC genome browser. Expression data will automatically be loaded as custom GFF and wiggle tracks.


FIDNameTypeBase Count
(% unmasked |
% coding)
Supporting
Mouse
ESTs/mRNAs
Conserved
Species
EmbryonicLiver Log2
Expression
AdultLiver Log2
Expression
HeartE11 Log2
Expression
HeartE12 Log2
Expression
Aorta Log2
Expression
Artery Log2
Expression
DefEndo Log2
Expression
G30754G6pd2Gene1542 (100% | 0%)N/AN/A0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)
T47983ENSMUST00000122002Transcript1542 (100% | 0%)N/AN/A0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)
ER170766ER1aExonRegion1542 (100% | 0%)000.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)0.00 (C | P)


Figures displaying gene and feature expression levels in each library

Insufficient data to create figures



Download gene data file (G6pd2): ENSMUSG00000083703.txt