Summary page for comparison: 'AdultLiver_vs_EmbryonicLiver' (MM0472_vs_MM0490) - Project: Morgen


Download complete candidate list as tab delimited text file: AdultLiver_vs_EmbryonicLiver.txt


Summary of Differential (DE) and Alternative Expression (AE) for all gene loci:

Total Candidate Genes: 9,405 (of 31,804 possible genes)

DE Genes: 6,776

AE Genes: 4,854

Alternative Exon Usage (EU) Genes: 3,971

Alernative Exon Skipping (ES) Genes: 659

Alternative Exon Boundary (AB) Genes: 1,314

Intron Retention (IR) Genes: 219

Cryptic Exon (CE) Genes: 342


Candidate Differential AND Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1115.17H19'protein_coding'15DELoss-36874.800N/AH19N/A
2214.71Afp'protein_coding'115DELoss-26807.800N/AAfpN/A
3314.32Slc38a4'protein_coding'116AELoss-140.723EU CE E1a_E2a100.00
4414.17Serpina3k'protein_coding'15DEGain18385.630N/ASerpina3kN/A
5513.51Mup3'protein_coding'210DEGain11650.540N/AMup3N/A
6613.51Dlk1'protein_coding'615DELoss-11627.710N/ADlk1N/A
7713.21Igf2'protein_coding'613DELoss-9484.880N/AIgf2N/A
8812.762610016E04Rik'protein_coding'28DEGain6960.540N/A2610016E04RikN/A
9912.51A1bg'protein_coding'17DEGain5846.190N/AA1bgN/A
101012.40Cyp2c29'protein_coding'19DEGain5419.650N/ACyp2c29N/A
111112.15Mug1'protein_coding'136DEGain4538.760N/AMug1N/A
121212.06Cyp2e1'protein_coding'311DEGain4272.047EU Cyp2e166.67
131311.90Cyp2c50'protein_coding'29DEGain3828.740N/ACyp2c50N/A
141411.90Cyp4a10'protein_coding'215DEGain3820.390N/ACyp4a10N/A
151511.80Fn1'protein_coding'347AELoss-1491.147EU E24a_E25a50.00
161611.67Cyp4a14'protein_coding'112DEGain3258.980N/ACyp4a14N/A
171711.01Hamp2'protein_coding'13DEGain2058.910N/AHamp2N/A
181810.93E2f8'protein_coding'317AEGain90.5522EU AB IR I4_AR166.67
191910.87Mettl7b'protein_coding'12DEGain1874.910N/AMettl7bN/A
202010.84Cyp2f2'protein_coding'110DEGain1837.710N/ACyp2f2N/A
212110.83Orm1'protein_coding'16DEGain1818.460N/AOrm1N/A
222210.78Cyp2c54'protein_coding'19DEGain1762.470N/ACyp2c54N/A
232310.73Gpc3'protein_coding'29DELoss-1702.310N/AGpc3N/A
242410.69Cyp2c40'protein_coding'19DEGain1652.030N/ACyp2c40N/A
252510.62Mug2'protein_coding'135DEGain1569.500N/AMug2N/A
262610.60Cml2'protein_coding'13DEGain1555.880N/ACml2N/A
272710.59Tdo2'protein_coding'112DEGain1546.660N/ATdo2N/A
282810.48RP23-287E8.3'protein_coding'311DEGain1429.350N/ARP23-287E8.3N/A
292910.37Phgdh'protein_coding'112DELoss-1325.940N/APhgdhN/A
303010.29Serpina3m'protein_coding'15DEGain1252.600N/ASerpina3mN/A
313110.08Bex2'protein_coding'13DELoss-1085.300N/ABex2N/A
32329.98Cyp3a25'protein_coding'113DEGain1012.480N/ACyp3a25N/A
33339.97Fmo3'protein_coding'212DEGain1001.490N/AFmo3N/A
34349.97Bex1'protein_coding'37DELoss-1000.620N/ABex1N/A
35359.96EG13909'protein_coding'213DEGain997.110N/AEG13909N/A
36369.95Sult3a1'protein_coding'16DEGain987.160N/ASult3a1N/A
37379.94Es31'protein_coding'213DEGain980.430N/AEs31N/A
38389.93Cyp1a2'protein_coding'17DEGain974.920N/ACyp1a2N/A
39399.891100001G20Rik'protein_coding'13DEGain950.850N/A1100001G20RikN/A
40409.77Cyp2b9'protein_coding'19DEGain874.580N/ACyp2b9N/A
41419.73Dusp9'protein_coding'14DELoss-846.760N/ADusp9N/A
42429.71Cyp4f14'protein_coding'112DEGain837.220N/ACyp4f14N/A
43439.55Psat1'protein_coding'19DELoss-750.250N/APsat1N/A
44449.53BC014805'protein_coding'214DEGain740.100N/ABC014805N/A
45459.48Cyp2c37'protein_coding'19DEGain715.580N/ACyp2c37N/A
46469.48Ugt2a3'protein_coding'16DEGain711.870N/AUgt2a3N/A
47479.47G6pc'protein_coding'15DEGain711.290N/AG6pcN/A
48489.42Cyp2j5'protein_coding'19DEGain686.720N/ACyp2j5N/A
49499.39RP23-163F11.3'protein_coding'29DEGain672.360N/ARP23-163F11.3N/A
50509.36Pnliprp1'protein_coding'113DELoss-658.780N/APnliprp1N/A
51519.35Cyp3a11'protein_coding'113DEGain654.082EU Cyp3a110.00
52529.34Es1'protein_coding'113DEGain649.850N/AEs1N/A
53539.26Cyp3a41'protein_coding'113DEGain613.930N/ACyp3a41N/A
54549.26Prlr'protein_coding'312DEGain612.470N/APrlrN/A
55559.25Hsd17b6'protein_coding'15DEGain608.260N/AHsd17b6N/A
56569.23Shbg'protein_coding'18DELoss-601.930N/AShbgN/A
57579.22Tat'protein_coding'112DEGain597.600N/ATatN/A
58589.08AU018778'protein_coding'114DEGain540.890N/AAU018778N/A
59599.06St3gal1'protein_coding'313AELoss-22.205EU AB CE E3_Aa100.00
60609.06Cited1'protein_coding'36DELoss-532.850N/ACited1N/A
61619.05Fosb'protein_coding'14DELoss-528.280N/AFosbN/A
62629.02Slco1b2'protein_coding'216DEGain519.960N/ASlco1b2N/A
63639.01SNORD113'snoRNA'11DELoss-515.040N/ASNORD113N/A
64648.97Fgl1'protein_coding'210DEGain500.550N/AFgl1N/A
65658.94Pigr'protein_coding'111DEGain492.222EU Pigr0.00
66668.88Slc4a1'protein_coding'120DELoss-471.290N/ASlc4a1N/A
67678.88Inmt'protein_coding'13DEGain470.420N/AInmtN/A
68688.82A2m'protein_coding'136DELoss-451.340N/AA2mN/A
69698.79Cyp2c38'protein_coding'19DEGain443.900N/ACyp2c38N/A
70708.79Pemt'protein_coding'614AELoss-3.455EU AB ER1a66.67
71718.729030619P08Rik'protein_coding'14DEGain421.940N/A9030619P08RikN/A
72728.69Cyp2a4'protein_coding'19DEGain413.970N/ACyp2a4N/A
73738.68Krt20'protein_coding'18DELoss-409.160N/AKrt20N/A
74748.68Spink3'protein_coding'14DELoss-408.770N/ASpink3N/A
75758.66BC089597'protein_coding'28DEGain404.430N/ABC089597N/A
76768.64Cyp2c67'protein_coding'19DEGain400.135EU Cyp2c6725.00
77778.64Apoc3'protein_coding'38DEGain398.997EU AB Apoc360.00
78788.64Igsf1'protein_coding'528DELoss-398.650N/AIgsf1N/A
79798.63Bex4'protein_coding'25DELoss-397.120N/ABex4N/A
80808.632810007J24Rik'protein_coding'17DEGain119.804EU ES 2810007J24Rik100.00
81818.61Aldh1a1'protein_coding'113DEGain389.642EU Aldh1a10.00
82828.55Slc22a1'protein_coding'111DEGain374.690N/ASlc22a1N/A
83838.47Nedd4l'protein_coding'333AELoss-17.503EU ES E14a_E16a0.00
84848.44Slco1a1'protein_coding'114DEGain346.200N/ASlco1a1N/A
85858.43Hbb-y'protein_coding'13DELoss-346.000N/AHbb-yN/A
86868.43Fbp1'protein_coding'17DEGain343.870N/AFbp1N/A
87878.41Hrg'protein_coding'17DEGain341.150N/AHrgN/A
88888.41Hsd11b1'protein_coding'16DEGain340.690N/AHsd11b1N/A
89898.40C730007P19Rik'protein_coding'14DEGain338.040N/AC730007P19RikN/A
90908.38Grb10'protein_coding'621DELoss-333.818EU ES AB Grb1033.33
91918.35C730048C13Rik'protein_coding'413DEGain326.200N/AC730048C13RikN/A
92928.24AC118710.7-1'protein_coding'110DEGain302.620N/AAC118710.7-1N/A
93938.23Bnip3l'protein_coding'29AELoss-21.942AB CE I1_AR20
94948.22Pcdh24'protein_coding'132DELoss-298.280N/APcdh24N/A
95958.22RP23-463P1.3'protein_coding'519DEGain297.560N/ARP23-463P1.3N/A
96968.17Cyp3a44'protein_coding'113DEGain288.700N/ACyp3a44N/A
97978.15Trim2'protein_coding'722AELoss-35.575EU ES AB ER2a0.00
98988.14Hbb-b1'protein_coding'13DELoss-282.200N/AHbb-b1N/A
99998.13Asns'protein_coding'214DELoss-281.050N/AAsnsN/A
1001008.13Trip4'protein_coding'524AELoss-30.014AB IR CE I1_AR30
1011018.12Azgp1'protein_coding'14DEGain278.901EU Azgp10
1021028.11AC121985.3'protein_coding'114DEGain277.010N/AAC121985.3N/A
1031038.11Ngfrap1'protein_coding'37DELoss-275.733EU AB Ngfrap10.00
1041048.10Akr1c6'protein_coding'19DEGain273.531ES Akr1c60
1051058.09EG214403'protein_coding'316DEGain271.600N/AEG214403N/A
1061068.05Acox1'protein_coding'316AELoss-7.957EU ES E8a_E10a66.67
1071078.00Cyp2a5'protein_coding'19DEGain255.490N/ACyp2a5N/A
1081087.99Cdkn1c'protein_coding'14DELoss-253.631EU Cdkn1c0
1091097.95Igf2bp1'protein_coding'115DELoss-247.610N/AIgf2bp1N/A
1101107.95OTTMUSG00000007485'protein_coding'17DEGain246.700N/AOTTMUSG00000007485N/A
1111117.93Mogat2'protein_coding'16DELoss-243.900N/AMogat2N/A
1121127.92AC153582.10'protein_coding'16DEGain242.180N/AAC153582.10N/A
1131137.91Cps1'protein_coding'138DEGain241.181EU Cps10
1141147.90Cyp2b13'protein_coding'19DEGain238.090N/ACyp2b13N/A
1151157.87Akr1c14'protein_coding'214DEGain233.980N/AAkr1c14N/A
1161167.87Fam120b'protein_coding'111AEGain28.3911AB IR I9_SR10
1171177.86Nnmt'protein_coding'26DEGain231.990N/ANnmtN/A
1181187.84Slc36a2'protein_coding'110DELoss-229.770N/ASlc36a2N/A
1191197.82Slco1a4'protein_coding'114DEGain226.650N/ASlco1a4N/A
1201207.78Pon1'protein_coding'19DEGain219.870N/APon1N/A
1211217.777SK'misc_RNA'11DELoss-218.920N/A7SKN/A
1221227.77Ugt2b1'protein_coding'16DEGain218.740N/AUgt2b1N/A
1231237.77Acss1'protein_coding'114DELoss-218.360N/AAcss1N/A
1241247.76Dio1'protein_coding'26DEGain216.650N/ADio1N/A
1251257.73Tubb6'protein_coding'14AEGain4.463EU AB E4_Aa0
1261267.71Phlda2'protein_coding'12DELoss-208.770N/APhlda2N/A
1271277.70Rrm2b'protein_coding'19AELoss-20.802CE I5_AR10
1281287.69Rdh7'protein_coding'28DEGain206.250N/ARdh7N/A
1291297.68Acaca'protein_coding'562AEGain31.955EU CE I1_AR40
1301307.65Ugt3a2'protein_coding'211DEGain201.535EU AB Ugt3a20.00
1311317.65Col1a1'protein_coding'252DELoss-200.239EU AB Col1a142.86
1321327.60Itm2a'protein_coding'16DELoss-193.990N/AItm2aN/A
1331337.59Mug4'protein_coding'138DEGain192.910N/AMug4N/A
1341347.58Agxt2l1'protein_coding'113DEGain191.900N/AAgxt2l1N/A
1351357.57Adh4'protein_coding'19DEGain189.840N/AAdh4N/A
1361367.57Iigp1'protein_coding'23DEGain189.721EU Iigp10
1371377.57Slco2b1'protein_coding'318DEGain189.560N/ASlco2b1N/A
1381387.55Scd2'protein_coding'16DELoss-187.791EU Scd20
1391397.53Tmem132a'protein_coding'213AEGain4.8618EU AB IR I975.00
1401407.43Apoa5'protein_coding'25DEGain172.563EU Apoa550.00
1411417.43Lrg1'protein_coding'12DEGain172.500N/ALrg1N/A
1421427.43Tcp1'protein_coding'112AEGain25.7428AB IR E6_Da0
1431437.43Anp32a'protein_coding'17AEGain23.621CE I1_AR80
1441447.41Ido2'protein_coding'211DEGain169.940N/AIdo2N/A
1451457.40Akr1c20'protein_coding'212DEGain169.090N/AAkr1c20N/A
1461467.40Fos'protein_coding'14DELoss-168.930N/AFosN/A
1471477.40Clec4f'protein_coding'17DEGain168.340N/AClec4fN/A
1481487.39Exod1'protein_coding'313AEGain16.294EU AB E12_Aa100.00
1491497.37Mbl2'protein_coding'16DEGain165.561EU Mbl20
1501507.36AC175538.1'protein_coding'12DELoss-163.760N/AAC175538.1N/A
1511517.34Rdh16'protein_coding'14DEGain162.480N/ARdh16N/A
1521527.34OTTMUSG00000000231'protein_coding'16DEGain161.760N/AOTTMUSG00000000231N/A
1531537.31Mllt4'protein_coding'119AEGain15.324CE I1_SR40
1541547.27Tomm40l'protein_coding'313AELoss-16.0230EU AB IR E1a_E2b61.54
1551557.26Apoo'protein_coding'414AELoss-15.272EU ER4a100.00
1561567.26Meg3'protein_coding'15DELoss-153.204IR Meg30
1571577.23AL606704.20'pseudogene'12DELoss-150.630N/AAL606704.20N/A
1581587.23Hba-a1'protein_coding'26DELoss-150.070N/AHba-a1N/A
1591597.22Upp2'protein_coding'412DEGain149.130N/AUpp2N/A
1601607.21Sds'protein_coding'210DEGain147.780N/ASdsN/A
1611617.18Nope'protein_coding'222DELoss-145.340N/ANopeN/A
1621627.17Ltbr'protein_coding'110AEGain21.972IR I5_SR10
1631637.15Acot3'protein_coding'38AELoss-4.111AB E2_Aa0
1641647.11Cyp3a59'protein_coding'113DEGain138.600N/ACyp3a59N/A
1651657.11Apol9b'protein_coding'25DEGain138.560N/AApol9bN/A
1661667.10Macrod1'protein_coding'111AELoss-5.011IR Ix0
1671677.08Hsd3b1'protein_coding'28DELoss-135.280N/AHsd3b1N/A
1681687.07A530050D06Rik'protein_coding'115DEGain134.220N/AA530050D06RikN/A
1691697.07Eno1'protein_coding'315AELoss-182.783EU ES ER5a0.00
1701707.04BC026782'protein_coding'316DEGain131.744EU ES AB BC0267820.00
1711717.04Igf1'protein_coding'817DEGain131.620N/AIgf1N/A
1721727.04Apol9b'protein_coding'13DEGain131.370N/AApol9bN/A
1731737.02Slc1a2'protein_coding'719DEGain129.650N/ASlc1a2N/A
1741747.00Adh1'protein_coding'19DEGain128.310N/AAdh1N/A
1751757.00Hkdc1'protein_coding'118DELoss-127.780N/AHkdc1N/A
1761766.98Apon'protein_coding'23DEGain126.151EU Apon0
1771776.97H1fx'protein_coding'11DELoss-125.590N/AH1fxN/A
1781786.96Ttpa'protein_coding'412DEGain47.473EU AB Ttpa0.00
1791796.96AC159106.3'protein_coding'17DELoss-124.480N/AAC159106.3N/A
1801806.96Timeless'protein_coding'843AEGain4.2437EU AB E23_Da60.71
1811816.95Vsig4'protein_coding'17DEGain123.670N/AVsig4N/A
1821826.95Depdc6'protein_coding'311AELoss-19.422EU AB ER2a0
1831836.94Thrsp'protein_coding'12DEGain122.400N/AThrspN/A
1841846.94Capn6'protein_coding'113DELoss-122.380N/ACapn6N/A
1851856.93Ccne1'protein_coding'214DELoss-121.850N/ACcne1N/A
1861866.92Cyp17a1'protein_coding'18DEGain121.180N/ACyp17a1N/A
1871876.92Aox3'protein_coding'135DEGain120.960N/AAox3N/A
1881886.91Acsm5'protein_coding'114DEGain120.500N/AAcsm5N/A
1891896.90Gipc2'protein_coding'16DELoss-119.560N/AGipc2N/A
1901906.88Tsr1'protein_coding'115AEGain14.1720EU AB IR CE E13_Da0
1911916.85Atf3'protein_coding'14DELoss-115.210N/AAtf3N/A
1921926.84Slc17a4'protein_coding'422DEGain114.830N/ASlc17a4N/A
1931936.84Hlf'protein_coding'511AELoss-27.6111EU ES AB ER2a83.33
1941946.82Serpina3n'protein_coding'15DEGain113.010N/ASerpina3nN/A
1951956.82mmu-mir-699'miRNA'11DELoss-112.640N/Ammu-mir-699N/A
1961966.81Xdh'protein_coding'237DEGain112.520N/AXdhN/A
1971976.80Srr'protein_coding'617AELoss-4.423AB E8_Aa0
1981986.77Bcas1'protein_coding'316DELoss-109.510N/ABcas1N/A
1991996.776720460F02Rik'protein_coding'16DELoss-109.500N/A6720460F02RikN/A
2002006.77Sucnr1'protein_coding'12DEGain109.280N/ASucnr1N/A
2012016.77Pnkd'protein_coding'417AELoss-6.916EU ES AB E2a_E5a75.00
2022026.77Slc39a5'protein_coding'112DELoss-108.831EU Slc39a50
2032036.76Mdk'protein_coding'59DELoss-108.370N/AMdkN/A
2042046.75Gypa'protein_coding'18DELoss-107.890N/AGypaN/A
2052056.73Sdro'protein_coding'14DEGain106.220N/ASdroN/A
2062066.73Uhrf1'protein_coding'422DELoss-106.100N/AUhrf1N/A
2072076.72Hbb-b2'protein_coding'13DELoss-105.280N/AHbb-b2N/A
2082086.69Stat5b'protein_coding'221AEGain13.163EU E2a_E3a50.00
2092096.68Hao1'protein_coding'18DEGain102.570N/AHao1N/A
2102106.68Plagl1'protein_coding'625DELoss-102.470N/APlagl1N/A
2112116.67Per2'protein_coding'123AEGain4.053EU AB E3_Aa0.00
2122126.67Naaladl1'protein_coding'118DELoss-102.040N/ANaaladl1N/A
2132136.65Igf2bp3'protein_coding'115DELoss-100.100N/AIgf2bp3N/A
2142146.64Csrp3'protein_coding'16DEGain99.880N/ACsrp3N/A
2152156.64Rbp2'protein_coding'14DELoss-99.510N/ARbp2N/A
2162166.64Fetub'protein_coding'210DEGain99.511ES Fetub0
2172176.63Hba-a2'protein_coding'26DELoss-99.310N/AHba-a2N/A
2182186.63Epb4.1l5'protein_coding'226AELoss-25.1519EU ES CE E25a_E26a94.12
2192196.63Aurka'protein_coding'312AEGain2.4613EU ES AB I8_SR170.00
2202206.63Eif2s3x'protein_coding'213AELoss-14.953EU ER4a50.00
2212216.62Mme'protein_coding'225DEGain98.550N/AMmeN/A
2222226.61Cyp2d40'protein_coding'16DEGain97.700N/ACyp2d40N/A
2232236.61Pecam1'protein_coding'520AELoss-6.405EU ES ER1a0.00
2242246.61Hpgd'protein_coding'17DEGain97.561EU Hpgd0
2252256.61Pklr'protein_coding'212AELoss-25.683EU ENSMUST0000004711150.00
2262266.59Sult2a1'protein_coding'16DEGain96.191EU Sult2a10
2272276.59Glyat'protein_coding'29DEGain96.140N/AGlyatN/A
2282286.57Baat'protein_coding'14DEGain94.813EU ES Baat50.00
2292296.56Mcm2'protein_coding'116DELoss-38.072EU Mcm2100.00
2302306.56Slc10a1'protein_coding'15DEGain94.393AB IR Slc10a10
2312316.54Tceal5'protein_coding'13DELoss-92.960N/ATceal5N/A
2322326.53Nphp3'protein_coding'654AELoss-8.1059EU AB ER10a94.44
2332336.53Ccnf'protein_coding'219AEGain4.8016EU AB E15_Aa64.29
2342346.50Lgals2'protein_coding'14DELoss-90.650N/ALgals2N/A
2352356.49mmu-mir-410'miRNA'11DELoss-89.910N/Ammu-mir-410N/A
2362366.48Pnliprp2'protein_coding'112DELoss-89.460N/APnliprp2N/A
2372376.48EG240327'protein_coding'13DEGain89.040N/AEG240327N/A
2382386.47Mfap2'protein_coding'29DELoss-88.910N/AMfap2N/A
2392396.47Ptk7'protein_coding'120DELoss-88.510N/APtk7N/A
2402406.47Hmga2'protein_coding'15DELoss-88.480N/AHmga2N/A
2412416.47Hba-x'protein_coding'13DELoss-88.370N/AHba-xN/A
2422426.46Miox'protein_coding'110DELoss-88.230N/AMioxN/A
2432436.45Peg3'protein_coding'212DELoss-87.677EU Peg350.00
2442446.459530008L14Rik'protein_coding'29DEGain35.8212EU AB 9530008L14Rik100.00
2452456.45Apol7a'protein_coding'27DEGain87.570N/AApol7aN/A
2462466.45Snca'protein_coding'16DELoss-87.270N/ASncaN/A
2472476.43Cyp2a22'protein_coding'19DEGain86.200N/ACyp2a22N/A
2482486.42Upk3b'protein_coding'16DELoss-85.880N/AUpk3bN/A
2492496.411100001E04Rik'protein_coding'213DELoss-85.300N/A1100001E04RikN/A
2502506.41Zc3h7a'protein_coding'123AELoss-35.7310AB IR I190
2512516.41Birc5'protein_coding'35DELoss-84.820N/ABirc5N/A


Candidate Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1314.32Slc38a4'protein_coding'116AELoss-140.723EU CE E1a_E2a100.00
21212.06Cyp2e1'protein_coding'311DEGain4272.047EU Cyp2e166.67
31511.80Fn1'protein_coding'347AELoss-1491.147EU E24a_E25a50.00
41810.93E2f8'protein_coding'317AEGain90.5522EU AB IR I4_AR166.67
5519.35Cyp3a11'protein_coding'113DEGain654.082EU Cyp3a110.00
6599.06St3gal1'protein_coding'313AELoss-22.205EU AB CE E3_Aa100.00
7658.94Pigr'protein_coding'111DEGain492.222EU Pigr0.00
8708.79Pemt'protein_coding'614AELoss-3.455EU AB ER1a66.67
9768.64Cyp2c67'protein_coding'19DEGain400.135EU Cyp2c6725.00
10778.64Apoc3'protein_coding'38DEGain398.997EU AB Apoc360.00
11808.632810007J24Rik'protein_coding'17DEGain119.804EU ES 2810007J24Rik100.00
12818.61Aldh1a1'protein_coding'113DEGain389.642EU Aldh1a10.00
13838.47Nedd4l'protein_coding'333AELoss-17.503EU ES E14a_E16a0.00
14908.38Grb10'protein_coding'621DELoss-333.818EU ES AB Grb1033.33
15938.23Bnip3l'protein_coding'29AELoss-21.942AB CE I1_AR20
16978.15Trim2'protein_coding'722AELoss-35.575EU ES AB ER2a0.00
171008.13Trip4'protein_coding'524AELoss-30.014AB IR CE I1_AR30
181018.12Azgp1'protein_coding'14DEGain278.901EU Azgp10
191038.11Ngfrap1'protein_coding'37DELoss-275.733EU AB Ngfrap10.00
201048.10Akr1c6'protein_coding'19DEGain273.531ES Akr1c60
211068.05Acox1'protein_coding'316AELoss-7.957EU ES E8a_E10a66.67
221087.99Cdkn1c'protein_coding'14DELoss-253.631EU Cdkn1c0
231137.91Cps1'protein_coding'138DEGain241.181EU Cps10
241167.87Fam120b'protein_coding'111AEGain28.3911AB IR I9_SR10
251257.73Tubb6'protein_coding'14AEGain4.463EU AB E4_Aa0
261277.70Rrm2b'protein_coding'19AELoss-20.802CE I5_AR10
271297.68Acaca'protein_coding'562AEGain31.955EU CE I1_AR40
281307.65Ugt3a2'protein_coding'211DEGain201.535EU AB Ugt3a20.00
291317.65Col1a1'protein_coding'252DELoss-200.239EU AB Col1a142.86
301367.57Iigp1'protein_coding'23DEGain189.721EU Iigp10
311387.55Scd2'protein_coding'16DELoss-187.791EU Scd20
321397.53Tmem132a'protein_coding'213AEGain4.8618EU AB IR I975.00
331407.43Apoa5'protein_coding'25DEGain172.563EU Apoa550.00
341427.43Tcp1'protein_coding'112AEGain25.7428AB IR E6_Da0
351437.43Anp32a'protein_coding'17AEGain23.621CE I1_AR80
361487.39Exod1'protein_coding'313AEGain16.294EU AB E12_Aa100.00
371497.37Mbl2'protein_coding'16DEGain165.561EU Mbl20
381537.31Mllt4'protein_coding'119AEGain15.324CE I1_SR40
391547.27Tomm40l'protein_coding'313AELoss-16.0230EU AB IR E1a_E2b61.54
401557.26Apoo'protein_coding'414AELoss-15.272EU ER4a100.00
411567.26Meg3'protein_coding'15DELoss-153.204IR Meg30
421627.17Ltbr'protein_coding'110AEGain21.972IR I5_SR10
431637.15Acot3'protein_coding'38AELoss-4.111AB E2_Aa0
441667.10Macrod1'protein_coding'111AELoss-5.011IR Ix0
451697.07Eno1'protein_coding'315AELoss-182.783EU ES ER5a0.00
461707.04BC026782'protein_coding'316DEGain131.744EU ES AB BC0267820.00
471766.98Apon'protein_coding'23DEGain126.151EU Apon0
481786.96Ttpa'protein_coding'412DEGain47.473EU AB Ttpa0.00
491806.96Timeless'protein_coding'843AEGain4.2437EU AB E23_Da60.71
501826.95Depdc6'protein_coding'311AELoss-19.422EU AB ER2a0
511906.88Tsr1'protein_coding'115AEGain14.1720EU AB IR CE E13_Da0
521936.84Hlf'protein_coding'511AELoss-27.6111EU ES AB ER2a83.33
531976.80Srr'protein_coding'617AELoss-4.423AB E8_Aa0
542016.77Pnkd'protein_coding'417AELoss-6.916EU ES AB E2a_E5a75.00
552026.77Slc39a5'protein_coding'112DELoss-108.831EU Slc39a50
562086.69Stat5b'protein_coding'221AEGain13.163EU E2a_E3a50.00
572116.67Per2'protein_coding'123AEGain4.053EU AB E3_Aa0.00
582166.64Fetub'protein_coding'210DEGain99.511ES Fetub0
592186.63Epb4.1l5'protein_coding'226AELoss-25.1519EU ES CE E25a_E26a94.12
602196.63Aurka'protein_coding'312AEGain2.4613EU ES AB I8_SR170.00
612206.63Eif2s3x'protein_coding'213AELoss-14.953EU ER4a50.00
622236.61Pecam1'protein_coding'520AELoss-6.405EU ES ER1a0.00
632246.61Hpgd'protein_coding'17DEGain97.561EU Hpgd0
642256.61Pklr'protein_coding'212AELoss-25.683EU ENSMUST0000004711150.00
652266.59Sult2a1'protein_coding'16DEGain96.191EU Sult2a10
662286.57Baat'protein_coding'14DEGain94.813EU ES Baat50.00
672296.56Mcm2'protein_coding'116DELoss-38.072EU Mcm2100.00
682306.56Slc10a1'protein_coding'15DEGain94.393AB IR Slc10a10
692326.53Nphp3'protein_coding'654AELoss-8.1059EU AB ER10a94.44
702336.53Ccnf'protein_coding'219AEGain4.8016EU AB E15_Aa64.29
712436.45Peg3'protein_coding'212DELoss-87.677EU Peg350.00
722446.459530008L14Rik'protein_coding'29DEGain35.8212EU AB 9530008L14Rik100.00
732506.41Zc3h7a'protein_coding'123AELoss-35.7310AB IR I190
742576.36Tmem219'protein_coding'513AELoss-8.125EU ES ER3a75.00
752616.31Fgfr3'protein_coding'425AELoss-17.066EU ES AB E8a_E8c25.00
762626.31Acat3'protein_coding'19AELoss-3.566EU AB IR I8_AR10.00
772696.24Cd74'protein_coding'210DEGain75.552EU Cd74100.00
782756.19Cox15'protein_coding'211AEGain7.512EU ER9c100.00
792806.17Acnat2'protein_coding'27DEGain72.065EU AB Acnat20.00
802836.15Slc25a25'protein_coding'616AELoss-10.631ES E1a_E5a0
812876.14Mtus1'protein_coding'724AELoss-5.113EU ENSMUST0000011773550.00
822936.11Rdh1'protein_coding'14AEGain15.191EU E2a_E3a0
832946.11Mest'protein_coding'214DELoss-68.953EU Mest50.00
842966.08Tacc2'protein_coding'528AEGain14.195EU ES E2a_E4a25.00
852996.07Aktip'protein_coding'417AEGain32.732EU AB E12_Db0
863006.06Osbpl1a'protein_coding'1045AELoss-10.4822EU ES E3a_E4a57.14
873026.053200002M19Rik'protein_coding'617AEGain14.526EU AB CE ER1a66.67
883046.04Cyp4f13'protein_coding'113AELoss-4.351AB E1_Da0
893066.04Lphn1'protein_coding'325AEGain3.3012EU ES AB IR CE I14_SR20.00
903076.02Cd1d1'protein_coding'39DEGain65.091EU Cd1d10
913086.02Ctage5'protein_coding'225AELoss-10.495EU ES E5a_E7a50.00
923106.02Rab36'protein_coding'213AEGain9.1446EU AB IR I9_SR150.00
933126.01Psph'protein_coding'310DELoss-27.983EU AB Psph100.00
943155.99Itih4'protein_coding'325AELoss-6.241ES E13a_E15a0
953185.98Gpt'protein_coding'111DEGain27.5915EU AB IR Gpt100.00
963195.98Pltp'protein_coding'318AELoss-3.503EU AB E14_Da0
973215.97Anpep'protein_coding'223AELoss-59.791EU E1a_E2a0
983225.97Epb4.1l2'protein_coding'826AEGain8.816EU ES E17a_E18a20.00
993285.93Ugt1a10'protein_coding'1220AEGain1741.9812EU ES AB E11a_E12a42.86
1003305.92Slc45a3'protein_coding'27AELoss-7.236EU ES AB E1a_E3a100.00
1013315.91Nsfl1c'protein_coding'310AELoss-62.203EU E3a_E4a100.00
1023325.91Rfx5'protein_coding'621AELoss-6.752EU ER1a0.00
1033375.87Abcc3'protein_coding'232DEGain58.416EU Abcc30.00
1043385.87Ube2c'protein_coding'27DELoss-58.372EU Ube2c0.00
1053405.86Cdca3'protein_coding'16DELoss-58.171EU Cdca30
1063555.78Eif4a2'protein_coding'314AELoss-12.655EU ES E3a_E6a25.00
1073585.76Pum2'protein_coding'324AEGain12.115EU AB E22_Da0.00
1083605.74Fads3'protein_coding'112AEGain3.4718EU AB CE I3_AR30.00
1093615.74Scd1'protein_coding'16DEGain24.062EU Scd1100.00
1103635.73Ocel1'protein_coding'38AEGain7.664EU E3a_E4a66.67
1113695.71Ces1'protein_coding'114DEGain52.322EU Ces10.00
1123705.71Mki67'protein_coding'117DELoss-52.197EU Mki6750.00
1133715.71RP23-275N21.2'protein_coding'38AELoss-7.362EU AB ER1a0
1143725.70Insig2'protein_coding'28AEGain471.712EU ES E1a_E3a100.00
1153755.69Acsm1'protein_coding'214DEGain51.782EU ES Acsm10.00
1163765.69Clec4g'protein_coding'19DEGain51.621EU Clec4g0
1173775.69Npr1'protein_coding'122AELoss-3.7719EU AB E21_Aa47.06
1183805.69Fpgs'protein_coding'216AELoss-7.052EU ENSMUST00000028148100.00
1193815.68Acaa1b'protein_coding'112DEGain51.352Acaa1b0
1203825.68Cyp27a1'protein_coding'19DEGain51.344AB IR Cyp27a10
1213835.68Atp11c'protein_coding'230DEGain51.156EU ES Atp11c20.00
1223845.67AI132487'protein_coding'16DEGain51.035EU AI13248750.00
1233855.67Uox'protein_coding'211DEGain50.972EU Uox0.00
1243895.65Zfp385a'protein_coding'110AELoss-65.864EU CE I1_AR1100.00
1253935.65Rtn4'protein_coding'512AEGain58.697EU ES ENSMUST0000006099266.67
1263945.64Nr1i3'protein_coding'311DEGain49.956EU ES AB IR Nr1i30.00
1273955.64Es22'protein_coding'114DEGain22.832EU Es22100.00
1283975.64Thra'protein_coding'211AEGain8.592EU AB E10_Aa0
1293985.64Il11ra1'protein_coding'419AEGain9.264EU CE I2_AR3100.00
1304035.62Smurf2'protein_coding'320AELoss-6.886EU CE I9_AR5100.00
1314045.61Eif5'protein_coding'314AELoss-10.663EU ES E3a_E3c0.00
1324075.59Adipor2'protein_coding'18AEGain213.963EU ES ER1a50.00
1334085.59Top2a'protein_coding'136DELoss-48.2116EU CE Top2a57.14
1344105.58Ssbp3'protein_coding'519AELoss-47.723EU E6a_E7a100.00
1354135.57Hnrnpd'protein_coding'39AEGain4.137EU AB IR E8_Da100.00
1364145.56Fam171a1'protein_coding'413AEGain8.535EU ES E1a_E4a25.00
1374165.55Arap1'protein_coding'639AELoss-21.3512EU ES AB E16a_E17a90.00
1384175.55Myo1b'protein_coding'433AELoss-6.4210EU ES AB CE ER24a66.67
1394195.54Aldh1a7'protein_coding'113DEGain46.602EU Aldh1a70.00
1404205.54Tmprss2'protein_coding'114AEGain3.393EU AB E9_Aa100.00
1414215.54Pcf11'protein_coding'320AEGain12.5017EU AB IR CE E15_Da0
1424235.53Syce2'protein_coding'15AEGain4.4213EU AB IR CE I4_AR160.00
1434265.52Plekha6'protein_coding'329AELoss-29.707EU ES AB E25a_E27a33.33
1444345.50Adar'protein_coding'620AELoss-21.282EU ER1a0.00
1454355.50Cfhr1'protein_coding'16DEGain45.212EU Cfhr10.00
1464395.49Fmr1'protein_coding'1032AELoss-23.3720EU AB ER1a75.00
1474405.48Aph1a'protein_coding'28AELoss-27.912EU ER6c0.00
1484415.48Golm1'protein_coding'211DELoss-44.583EU ES Golm150.00
1494435.48Cd68'protein_coding'29AELoss-7.6117EU AB IR I40.00
1504475.47Tmcc2'protein_coding'15DELoss-20.714EU Tmcc2100.00
1514485.46Sult1a1'protein_coding'412DEGain44.151EU Sult1a10
1524525.45Ccna2'protein_coding'18DELoss-43.785EU Ccna250.00
1534575.44AI449175'protein_coding'27AELoss-7.733EU ES AB E1a_E3a100.00
1544585.43Fam55b'protein_coding'16AELoss-4.052EU CE I2_AR20
1554625.42Pkp4'protein_coding'326AEGain9.826EU ES E11a_E12a40.00
1564655.40Hps3'protein_coding'220AEGain11.245EU AB E14_Da0
1574675.40Gulo'protein_coding'112AELoss-21.431ES E7a_E9a0
1584705.39Xpr1'protein_coding'421AELoss-10.905EU AB ER1b50.00
1594715.39Son'protein_coding'621AELoss-21.906EU AB CE E1a_E2a66.67
1604735.38Sult1d1'protein_coding'211DEGain41.594EU AB Sult1d10.00
1614755.37Trnt1'protein_coding'517AEGain15.2312EU ES AB E9_Aa100.00
1624785.37Net1'protein_coding'213AELoss-33.934EU ES ER3a66.67
1634795.37Lrrfip2'protein_coding'330AEGain8.074EU ES E7a_E17a33.33
1644805.36Shroom3'protein_coding'313AEGain5.294EU E1a_E2a66.67
1654825.36Nnat'protein_coding'310DELoss-41.056EU AB Nnat33.33
1664855.35Snx32'protein_coding'113AELoss-6.389EU AB IR E11_Da100.00
1674875.34Slc12a9'protein_coding'114AEGain9.874EU AB CE E2_Aa0
1684885.33Col1a2'protein_coding'152DELoss-40.262EU Col1a20.00
1694925.33Asgr1'protein_coding'310DEGain40.191ES Asgr10
1704935.33Zbtb45'protein_coding'13AEGain6.665AB IR I20
1714955.32Nufip2'protein_coding'25AEGain8.838EU AB CE E4_Da0
1724965.31Sfpq'protein_coding'110AEGain5.933EU I9_SR20
1734985.31Mpdz'protein_coding'552AELoss-16.0940EU ES ER2a87.18
1744995.31Rpl13'protein_coding'16AELoss-238.352EU ER4a100.00
1755005.31Rora'protein_coding'316AELoss-6.505EU AB ER1b33.33
1765055.29Ugt3a1'protein_coding'17DEGain39.232EU Ugt3a1100.00
1775075.29Slc7a2'protein_coding'417AELoss-6.171ES E8a_E10a0
1785095.29Hnrnpk'protein_coding'420AELoss-36.726EU ER5a20.00
1795115.28Arfgef1'protein_coding'138AEGain23.449EU E13a_E14a75.00
1805125.28Fkbp11'protein_coding'16DELoss-38.931EU Fkbp110
1815135.28Cyp2c70'protein_coding'19DEGain38.912EU Cyp2c700.00
1825155.28Cask'protein_coding'936AELoss-15.455EU ES E23a_E24a75.00
1835165.28Acta2'protein_coding'19DELoss-38.731EU Acta20
1845215.26Cp'protein_coding'630DEGain38.328EU AB Cp50.00
1855235.26Cfp'protein_coding'19AELoss-4.023EU AB IR E1_Da0
1865245.26Cfh'protein_coding'327DEGain38.232EU Cfh0.00
1875255.25Sirt1'protein_coding'316AELoss-7.851AB E6_Ab0
1885275.23Prr8'protein_coding'425AEGain7.2713EU AB E19_Da80.00
1895285.23Dmtf1'protein_coding'521AEGain10.8113EU ES AB IR E19_Da25.00
1905295.22Dst'protein_coding'8114AELoss-80.65137EU ES AB CE E65a_E66a87.12
1915305.22Asb3'protein_coding'212AEGain23.591CE I1_AR20
1925315.22Lars2'protein_coding'121DELoss-18.0338EU Lars297.30
1935335.21Tcf25'protein_coding'421AEGain9.564ES AB CE ENSMUST000001088390.00
1945355.21Tcf3'protein_coding'213AEGain3.081I12_SR10
1955395.20Utx'protein_coding'232AEGain19.988EU AB CE E29_Da25.00
1965415.19Zfp384'protein_coding'931AELoss-23.839EU ES AB IR ER1a80.00
1975435.18Pygb'protein_coding'120DELoss-36.371EU Pygb0
1985445.18Trp53bp1'protein_coding'633AEGain5.443AB E28_Da0
1995455.18Parp4'protein_coding'132AEGain26.2716EU AB IR CE E22_Aa100.00
2005465.18Krit1'protein_coding'217AELoss-9.265EU AB E1a_E2a50.00
2015475.18Zfp187'protein_coding'28AELoss-17.685EU ES AB CE E2a_E5a0.00
2025505.15Tpm3'protein_coding'721AEGain4.354EU ES E8a_E9a33.33
2035535.15Lig1'protein_coding'129DELoss-35.571EU Lig10
2045555.15Mcm6'protein_coding'117DELoss-35.561EU Mcm60
2055565.15Cd63'protein_coding'29DELoss-35.481EU Cd630
2065585.15Pdpk1'protein_coding'619AELoss-6.193EU AB E2_Ab100.00
2075595.14F9'protein_coding'18DEGain35.312EU F90.00
2085625.13H2-Q1'protein_coding'316AELoss-7.588EU AB E13a_E14a66.67
2095645.12Slc17a2'protein_coding'316DEGain34.8911EU ES AB IR Slc17a220.00
2105665.12Prmt1'protein_coding'821DELoss-17.142EU Prmt1100.00
2115685.12Abhd1'protein_coding'110AEGain5.776EU AB IR E2a_E3a0
2125715.12Ptprs'protein_coding'537DELoss-34.778EU AB Ptprs0.00
2135725.11Ttc3'protein_coding'652AEGain3.507EU CE E7a_E8a0.00
2145745.11Nln'protein_coding'318AELoss-9.494AB CE I12_AR10
2155755.11Rrm2'protein_coding'110DELoss-34.543EU Rrm250.00
2165785.09Epb4.1l4b'protein_coding'328AELoss-6.731EU E20a_E21a0
2175795.09E030030I06Rik'protein_coding'23AEGain6.603AB CE I1_SR20
2185845.081200016B10Rik'protein_coding'324AEGain7.073EU E5a_E6a100.00
2195885.07Sfrs1'protein_coding'26AEGain9.587EU AB E3_Db33.33
2205925.06Map3k1'protein_coding'222AEGain5.394EU AB ER20d0.00
2215945.06Tssc1'protein_coding'19AEGain9.911CE I3_AR90
2225975.051810014F10Rik'protein_coding'411AELoss-5.732EU ER1b100.00
2235995.04Psen2'protein_coding'520AELoss-3.8511EU AB IR CE ENSMUST0000011110825.00
2246005.04Cd5l'protein_coding'16DEGain16.383EU Cd5l100.00
2256025.04Ndrg2'protein_coding'216DEGain16.385EU Ndrg275.00
2266035.04Ncapd2'protein_coding'234DELoss-32.944EU AB Ncapd20.00
2276045.04Spnb3'protein_coding'137DEGain16.3316EU Spnb320.00
2286055.04Maged2'protein_coding'521DELoss-32.831AB Maged20
2296075.02Exosc9'protein_coding'112AELoss-20.554EU AB E11_Da0
2306095.02Tmem56'protein_coding'18DEGain32.521EU Tmem560
2316115.02Ppp2r5c'protein_coding'418AEGain6.778EU ES E2a_E3a85.71
2326135.01Per1'protein_coding'328AEGain3.576EU ES AB E20_Aa50.00
2336145.01Gtf2a1'protein_coding'210AELoss-5.726EU CE I1_AR175.00
2346155.01Rbm3'protein_coding'720AEGain3.0719EU I7_SR194.12
2356175.00Sdsl'protein_coding'211AEGain17.984EU ES AB ER1a100.00
2366185.00Txnrd2'protein_coding'523AELoss-7.251CE I1_AR30
2376204.99Slc25a22'protein_coding'315AELoss-5.032EU ES E1a_E3a100.00
2386244.99Arid4b'protein_coding'630AELoss-9.257EU ES ER1a33.33
2396254.98Gprasp1'protein_coding'515AEGain3.713EU CE I6_AR30
2406294.97Pfkfb1'protein_coding'215AELoss-5.395EU ES AB E1a_E3a100.00
2416354.96Ccnl1'protein_coding'212AEGain8.5210AB IR CE E6_Da0
2426364.95Suv420h1'protein_coding'924AELoss-8.632CE I1_AR10
2436404.95Golim4'protein_coding'218AEGain18.293EU ES AB E16_Da0.00
2446414.95Hmga1'protein_coding'717DELoss-30.832EU AB Hmga10
2456474.94Acadsb'protein_coding'213AELoss-2.313EU AB ER1a100.00
2466534.93C4a'protein_coding'141DEGain30.411C4a0
2476554.92Aqp9'protein_coding'415DEGain30.211AB Aqp90
2486574.92Incenp'protein_coding'221DELoss-30.196EU ES Incenp20.00
2496594.91Igfbp2'protein_coding'311DEGain30.121EU Igfbp20
2506624.91Gnmt'protein_coding'16DEGain30.011ES Gnmt0
2516634.91Trp53i13'protein_coding'29AEGain4.622AB E1_Da0


Candidate Differential and Alternative Expression Genes (Gain ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1414.17Serpina3k'protein_coding'15DEGain18385.630N/ASerpina3kN/A
2513.51Mup3'protein_coding'210DEGain11650.540N/AMup3N/A
3812.762610016E04Rik'protein_coding'28DEGain6960.540N/A2610016E04RikN/A
4912.51A1bg'protein_coding'17DEGain5846.190N/AA1bgN/A
51012.40Cyp2c29'protein_coding'19DEGain5419.650N/ACyp2c29N/A
61112.15Mug1'protein_coding'136DEGain4538.760N/AMug1N/A
71212.06Cyp2e1'protein_coding'311DEGain4272.047EU Cyp2e166.67
81311.90Cyp2c50'protein_coding'29DEGain3828.740N/ACyp2c50N/A
91411.90Cyp4a10'protein_coding'215DEGain3820.390N/ACyp4a10N/A
101611.67Cyp4a14'protein_coding'112DEGain3258.980N/ACyp4a14N/A
111711.01Hamp2'protein_coding'13DEGain2058.910N/AHamp2N/A
121810.93E2f8'protein_coding'317AEGain90.5522EU AB IR I4_AR166.67
131910.87Mettl7b'protein_coding'12DEGain1874.910N/AMettl7bN/A
142010.84Cyp2f2'protein_coding'110DEGain1837.710N/ACyp2f2N/A
152110.83Orm1'protein_coding'16DEGain1818.460N/AOrm1N/A
162210.78Cyp2c54'protein_coding'19DEGain1762.470N/ACyp2c54N/A
172410.69Cyp2c40'protein_coding'19DEGain1652.030N/ACyp2c40N/A
182510.62Mug2'protein_coding'135DEGain1569.500N/AMug2N/A
192610.60Cml2'protein_coding'13DEGain1555.880N/ACml2N/A
202710.59Tdo2'protein_coding'112DEGain1546.660N/ATdo2N/A
212810.48RP23-287E8.3'protein_coding'311DEGain1429.350N/ARP23-287E8.3N/A
223010.29Serpina3m'protein_coding'15DEGain1252.600N/ASerpina3mN/A
23329.98Cyp3a25'protein_coding'113DEGain1012.480N/ACyp3a25N/A
24339.97Fmo3'protein_coding'212DEGain1001.490N/AFmo3N/A
25359.96EG13909'protein_coding'213DEGain997.110N/AEG13909N/A
26369.95Sult3a1'protein_coding'16DEGain987.160N/ASult3a1N/A
27379.94Es31'protein_coding'213DEGain980.430N/AEs31N/A
28389.93Cyp1a2'protein_coding'17DEGain974.920N/ACyp1a2N/A
29399.891100001G20Rik'protein_coding'13DEGain950.850N/A1100001G20RikN/A
30409.77Cyp2b9'protein_coding'19DEGain874.580N/ACyp2b9N/A
31429.71Cyp4f14'protein_coding'112DEGain837.220N/ACyp4f14N/A
32449.53BC014805'protein_coding'214DEGain740.100N/ABC014805N/A
33459.48Cyp2c37'protein_coding'19DEGain715.580N/ACyp2c37N/A
34469.48Ugt2a3'protein_coding'16DEGain711.870N/AUgt2a3N/A
35479.47G6pc'protein_coding'15DEGain711.290N/AG6pcN/A
36489.42Cyp2j5'protein_coding'19DEGain686.720N/ACyp2j5N/A
37499.39RP23-163F11.3'protein_coding'29DEGain672.360N/ARP23-163F11.3N/A
38519.35Cyp3a11'protein_coding'113DEGain654.082EU Cyp3a110.00
39529.34Es1'protein_coding'113DEGain649.850N/AEs1N/A
40539.26Cyp3a41'protein_coding'113DEGain613.930N/ACyp3a41N/A
41549.26Prlr'protein_coding'312DEGain612.470N/APrlrN/A
42559.25Hsd17b6'protein_coding'15DEGain608.260N/AHsd17b6N/A
43579.22Tat'protein_coding'112DEGain597.600N/ATatN/A
44589.08AU018778'protein_coding'114DEGain540.890N/AAU018778N/A
45629.02Slco1b2'protein_coding'216DEGain519.960N/ASlco1b2N/A
46648.97Fgl1'protein_coding'210DEGain500.550N/AFgl1N/A
47658.94Pigr'protein_coding'111DEGain492.222EU Pigr0.00
48678.88Inmt'protein_coding'13DEGain470.420N/AInmtN/A
49698.79Cyp2c38'protein_coding'19DEGain443.900N/ACyp2c38N/A
50718.729030619P08Rik'protein_coding'14DEGain421.940N/A9030619P08RikN/A
51728.69Cyp2a4'protein_coding'19DEGain413.970N/ACyp2a4N/A
52758.66BC089597'protein_coding'28DEGain404.430N/ABC089597N/A
53768.64Cyp2c67'protein_coding'19DEGain400.135EU Cyp2c6725.00
54778.64Apoc3'protein_coding'38DEGain398.997EU AB Apoc360.00
55808.632810007J24Rik'protein_coding'17DEGain119.804EU ES 2810007J24Rik100.00
56818.61Aldh1a1'protein_coding'113DEGain389.642EU Aldh1a10.00
57828.55Slc22a1'protein_coding'111DEGain374.690N/ASlc22a1N/A
58848.44Slco1a1'protein_coding'114DEGain346.200N/ASlco1a1N/A
59868.43Fbp1'protein_coding'17DEGain343.870N/AFbp1N/A
60878.41Hrg'protein_coding'17DEGain341.150N/AHrgN/A
61888.41Hsd11b1'protein_coding'16DEGain340.690N/AHsd11b1N/A
62898.40C730007P19Rik'protein_coding'14DEGain338.040N/AC730007P19RikN/A
63918.35C730048C13Rik'protein_coding'413DEGain326.200N/AC730048C13RikN/A
64928.24AC118710.7-1'protein_coding'110DEGain302.620N/AAC118710.7-1N/A
65958.22RP23-463P1.3'protein_coding'519DEGain297.560N/ARP23-463P1.3N/A
66968.17Cyp3a44'protein_coding'113DEGain288.700N/ACyp3a44N/A
671018.12Azgp1'protein_coding'14DEGain278.901EU Azgp10
681028.11AC121985.3'protein_coding'114DEGain277.010N/AAC121985.3N/A
691048.10Akr1c6'protein_coding'19DEGain273.531ES Akr1c60
701058.09EG214403'protein_coding'316DEGain271.600N/AEG214403N/A
711078.00Cyp2a5'protein_coding'19DEGain255.490N/ACyp2a5N/A
721107.95OTTMUSG00000007485'protein_coding'17DEGain246.700N/AOTTMUSG00000007485N/A
731127.92AC153582.10'protein_coding'16DEGain242.180N/AAC153582.10N/A
741137.91Cps1'protein_coding'138DEGain241.181EU Cps10
751147.90Cyp2b13'protein_coding'19DEGain238.090N/ACyp2b13N/A
761157.87Akr1c14'protein_coding'214DEGain233.980N/AAkr1c14N/A
771167.87Fam120b'protein_coding'111AEGain28.3911AB IR I9_SR10
781177.86Nnmt'protein_coding'26DEGain231.990N/ANnmtN/A
791197.82Slco1a4'protein_coding'114DEGain226.650N/ASlco1a4N/A
801207.78Pon1'protein_coding'19DEGain219.870N/APon1N/A
811227.77Ugt2b1'protein_coding'16DEGain218.740N/AUgt2b1N/A
821247.76Dio1'protein_coding'26DEGain216.650N/ADio1N/A
831257.73Tubb6'protein_coding'14AEGain4.463EU AB E4_Aa0
841287.69Rdh7'protein_coding'28DEGain206.250N/ARdh7N/A
851297.68Acaca'protein_coding'562AEGain31.955EU CE I1_AR40
861307.65Ugt3a2'protein_coding'211DEGain201.535EU AB Ugt3a20.00
871337.59Mug4'protein_coding'138DEGain192.910N/AMug4N/A
881347.58Agxt2l1'protein_coding'113DEGain191.900N/AAgxt2l1N/A
891357.57Adh4'protein_coding'19DEGain189.840N/AAdh4N/A
901367.57Iigp1'protein_coding'23DEGain189.721EU Iigp10
911377.57Slco2b1'protein_coding'318DEGain189.560N/ASlco2b1N/A
921397.53Tmem132a'protein_coding'213AEGain4.8618EU AB IR I975.00
931407.43Apoa5'protein_coding'25DEGain172.563EU Apoa550.00
941417.43Lrg1'protein_coding'12DEGain172.500N/ALrg1N/A
951427.43Tcp1'protein_coding'112AEGain25.7428AB IR E6_Da0
961437.43Anp32a'protein_coding'17AEGain23.621CE I1_AR80
971447.41Ido2'protein_coding'211DEGain169.940N/AIdo2N/A
981457.40Akr1c20'protein_coding'212DEGain169.090N/AAkr1c20N/A
991477.40Clec4f'protein_coding'17DEGain168.340N/AClec4fN/A
1001487.39Exod1'protein_coding'313AEGain16.294EU AB E12_Aa100.00
1011497.37Mbl2'protein_coding'16DEGain165.561EU Mbl20
1021517.34Rdh16'protein_coding'14DEGain162.480N/ARdh16N/A
1031527.34OTTMUSG00000000231'protein_coding'16DEGain161.760N/AOTTMUSG00000000231N/A
1041537.31Mllt4'protein_coding'119AEGain15.324CE I1_SR40
1051597.22Upp2'protein_coding'412DEGain149.130N/AUpp2N/A
1061607.21Sds'protein_coding'210DEGain147.780N/ASdsN/A
1071627.17Ltbr'protein_coding'110AEGain21.972IR I5_SR10
1081647.11Cyp3a59'protein_coding'113DEGain138.600N/ACyp3a59N/A
1091657.11Apol9b'protein_coding'25DEGain138.560N/AApol9bN/A
1101687.07A530050D06Rik'protein_coding'115DEGain134.220N/AA530050D06RikN/A
1111707.04BC026782'protein_coding'316DEGain131.744EU ES AB BC0267820.00
1121717.04Igf1'protein_coding'817DEGain131.620N/AIgf1N/A
1131727.04Apol9b'protein_coding'13DEGain131.370N/AApol9bN/A
1141737.02Slc1a2'protein_coding'719DEGain129.650N/ASlc1a2N/A
1151747.00Adh1'protein_coding'19DEGain128.310N/AAdh1N/A
1161766.98Apon'protein_coding'23DEGain126.151EU Apon0
1171786.96Ttpa'protein_coding'412DEGain47.473EU AB Ttpa0.00
1181806.96Timeless'protein_coding'843AEGain4.2437EU AB E23_Da60.71
1191816.95Vsig4'protein_coding'17DEGain123.670N/AVsig4N/A
1201836.94Thrsp'protein_coding'12DEGain122.400N/AThrspN/A
1211866.92Cyp17a1'protein_coding'18DEGain121.180N/ACyp17a1N/A
1221876.92Aox3'protein_coding'135DEGain120.960N/AAox3N/A
1231886.91Acsm5'protein_coding'114DEGain120.500N/AAcsm5N/A
1241906.88Tsr1'protein_coding'115AEGain14.1720EU AB IR CE E13_Da0
1251926.84Slc17a4'protein_coding'422DEGain114.830N/ASlc17a4N/A
1261946.82Serpina3n'protein_coding'15DEGain113.010N/ASerpina3nN/A
1271966.81Xdh'protein_coding'237DEGain112.520N/AXdhN/A
1282006.77Sucnr1'protein_coding'12DEGain109.280N/ASucnr1N/A
1292056.73Sdro'protein_coding'14DEGain106.220N/ASdroN/A
1302086.69Stat5b'protein_coding'221AEGain13.163EU E2a_E3a50.00
1312096.68Hao1'protein_coding'18DEGain102.570N/AHao1N/A
1322116.67Per2'protein_coding'123AEGain4.053EU AB E3_Aa0.00
1332146.64Csrp3'protein_coding'16DEGain99.880N/ACsrp3N/A
1342166.64Fetub'protein_coding'210DEGain99.511ES Fetub0
1352196.63Aurka'protein_coding'312AEGain2.4613EU ES AB I8_SR170.00
1362216.62Mme'protein_coding'225DEGain98.550N/AMmeN/A
1372226.61Cyp2d40'protein_coding'16DEGain97.700N/ACyp2d40N/A
1382246.61Hpgd'protein_coding'17DEGain97.561EU Hpgd0
1392266.59Sult2a1'protein_coding'16DEGain96.191EU Sult2a10
1402276.59Glyat'protein_coding'29DEGain96.140N/AGlyatN/A
1412286.57Baat'protein_coding'14DEGain94.813EU ES Baat50.00
1422306.56Slc10a1'protein_coding'15DEGain94.393AB IR Slc10a10
1432336.53Ccnf'protein_coding'219AEGain4.8016EU AB E15_Aa64.29
1442376.48EG240327'protein_coding'13DEGain89.040N/AEG240327N/A
1452446.459530008L14Rik'protein_coding'29DEGain35.8212EU AB 9530008L14Rik100.00
1462456.45Apol7a'protein_coding'27DEGain87.570N/AApol7aN/A
1472476.43Cyp2a22'protein_coding'19DEGain86.200N/ACyp2a22N/A
1482526.39Mfsd2'protein_coding'114DEGain84.130N/AMfsd2N/A
1492546.37Ldhd'protein_coding'317DEGain82.810N/ALdhdN/A
1502586.35Cyp2b10'protein_coding'210DEGain81.630N/ACyp2b10N/A
1512606.33Orm2'protein_coding'16DEGain80.680N/AOrm2N/A
1522636.29Cldn3'protein_coding'11DEGain78.040N/ACldn3N/A
1532686.25Cyp7a1'protein_coding'16DEGain76.070N/ACyp7a1N/A
1542696.24Cd74'protein_coding'210DEGain75.552EU Cd74100.00
1552726.22Gsta2'protein_coding'17DEGain74.530N/AGsta2N/A
1562736.21H2-Ea'protein_coding'15DEGain73.820N/AH2-EaN/A
1572746.19Pck1'protein_coding'110DEGain73.240N/APck1N/A
1582756.19Cox15'protein_coding'211AEGain7.512EU ER9c100.00
1592806.17Acnat2'protein_coding'27DEGain72.065EU AB Acnat20.00
1602816.17Fmo2'protein_coding'211DEGain72.030N/AFmo2N/A
1612856.15Gck'protein_coding'415DEGain70.800N/AGckN/A
1622916.11Fcgr2b'protein_coding'28DEGain69.290N/AFcgr2bN/A
1632926.11Apoa4'protein_coding'13DEGain69.190N/AApoa4N/A
1642936.11Rdh1'protein_coding'14AEGain15.191EU E2a_E3a0
1652966.08Tacc2'protein_coding'528AEGain14.195EU ES E2a_E4a25.00
1662976.08C4bp'protein_coding'110DEGain67.710N/AC4bpN/A
1672986.07Sqrdl'protein_coding'211DEGain67.340N/ASqrdlN/A
1682996.07Aktip'protein_coding'417AEGain32.732EU AB E12_Db0
1693016.06Dnase1l3'protein_coding'18DEGain66.560N/ADnase1l3N/A
1703026.053200002M19Rik'protein_coding'617AEGain14.526EU AB CE ER1a66.67
1713056.04Cyp8b1'protein_coding'11DEGain65.810N/ACyp8b1N/A
1723066.04Lphn1'protein_coding'325AEGain3.3012EU ES AB IR CE I14_SR20.00
1733076.02Cd1d1'protein_coding'39DEGain65.091EU Cd1d10
1743106.02Rab36'protein_coding'213AEGain9.1446EU AB IR I9_SR150.00
1753116.01Prg4'protein_coding'314DEGain64.590N/APrg4N/A
1763136.01Hacl1'protein_coding'117DEGain64.270N/AHacl1N/A
1773165.99AB056442'protein_coding'211DEGain63.340N/AAB056442N/A
1783185.98Gpt'protein_coding'111DEGain27.5915EU AB IR Gpt100.00
1793225.97Epb4.1l2'protein_coding'826AEGain8.816EU ES E17a_E18a20.00
1803255.95Cyp2c39'protein_coding'19DEGain61.730N/ACyp2c39N/A
1813265.94C9'protein_coding'111DEGain61.490N/AC9N/A
1823275.93AC092752.1'unprocessed_pseudogene'16DEGain61.150N/AAC092752.1N/A
1833285.93Ugt1a10'protein_coding'1220AEGain1741.9812EU ES AB E11a_E12a42.86
1843365.88AW112010'protein_coding'13DEGain58.910N/AAW112010N/A
1853375.87Abcc3'protein_coding'232DEGain58.416EU Abcc30.00
1863445.82Slc16a5'protein_coding'35DEGain56.370N/ASlc16a5N/A
1873455.81Igk-C'IG_C_gene'11DEGain56.260N/AIgk-CN/A
1883465.81Gpihbp1'protein_coding'14DEGain56.240N/AGpihbp1N/A
1893485.81Slc10a2'protein_coding'16DEGain56.050N/ASlc10a2N/A
1903505.79OTTMUSG00000000971'protein_coding'13DEGain55.460N/AOTTMUSG00000000971N/A
1913525.79AC160471.10-2'protein_coding'14DEGain55.200N/AAC160471.10-2N/A
1923545.78Slc22a7'protein_coding'110DEGain54.910N/ASlc22a7N/A
1933585.76Pum2'protein_coding'324AEGain12.115EU AB E22_Da0.00
1943605.74Fads3'protein_coding'112AEGain3.4718EU AB CE I3_AR30.00
1953615.74Scd1'protein_coding'16DEGain24.062EU Scd1100.00
1963635.73Ocel1'protein_coding'38AEGain7.664EU E3a_E4a66.67
1973675.72Cyp4a32'protein_coding'216DEGain52.600N/ACyp4a32N/A
1983695.71Ces1'protein_coding'114DEGain52.322EU Ces10.00
1993725.70Insig2'protein_coding'28AEGain471.712EU ES E1a_E3a100.00
2003755.69Acsm1'protein_coding'214DEGain51.782EU ES Acsm10.00
2013765.69Clec4g'protein_coding'19DEGain51.621EU Clec4g0
2023815.68Acaa1b'protein_coding'112DEGain51.352Acaa1b0
2033825.68Cyp27a1'protein_coding'19DEGain51.344AB IR Cyp27a10
2043835.68Atp11c'protein_coding'230DEGain51.156EU ES Atp11c20.00
2053845.67AI132487'protein_coding'16DEGain51.035EU AI13248750.00
2063855.67Uox'protein_coding'211DEGain50.972EU Uox0.00
2073885.66C6'protein_coding'116DEGain50.520N/AC6N/A
2083925.65Mup2'protein_coding'413DEGain50.260N/AMup2N/A
2093935.65Rtn4'protein_coding'512AEGain58.697EU ES ENSMUST0000006099266.67
2103945.64Nr1i3'protein_coding'311DEGain49.956EU ES AB IR Nr1i30.00
2113955.64Es22'protein_coding'114DEGain22.832EU Es22100.00
2123975.64Thra'protein_coding'211AEGain8.592EU AB E10_Aa0
2133985.64Il11ra1'protein_coding'419AEGain9.264EU CE I2_AR3100.00
2144075.59Adipor2'protein_coding'18AEGain213.963EU ES ER1a50.00
2154095.59AC151990.6-2'pseudogene'12DEGain48.080N/AAC151990.6-2N/A
2164135.57Hnrnpd'protein_coding'39AEGain4.137EU AB IR E8_Da100.00
2174145.56Fam171a1'protein_coding'413AEGain8.535EU ES E1a_E4a25.00
2184195.54Aldh1a7'protein_coding'113DEGain46.602EU Aldh1a70.00
2194205.54Tmprss2'protein_coding'114AEGain3.393EU AB E9_Aa100.00
2204215.54Pcf11'protein_coding'320AEGain12.5017EU AB IR CE E15_Da0
2214235.53Syce2'protein_coding'15AEGain4.4213EU AB IR CE I4_AR160.00
2224355.50Cfhr1'protein_coding'16DEGain45.212EU Cfhr10.00
2234365.50Cxcl9'protein_coding'26DEGain45.180N/ACxcl9N/A
2244375.49Esr1'protein_coding'517DEGain44.970N/AEsr1N/A
2254485.46Sult1a1'protein_coding'412DEGain44.151EU Sult1a10
2264495.46Mat1a'protein_coding'19DEGain44.020N/AMat1aN/A
2274515.46OTTMUSG00000000997'protein_coding'17DEGain43.950N/AOTTMUSG00000000997N/A
2284535.45Ly6a'protein_coding'14DEGain43.600N/ALy6aN/A
2294595.43Hamp1'protein_coding'13DEGain43.110N/AHamp1N/A
2304605.43Cldn2'protein_coding'23DEGain43.100N/ACldn2N/A
2314625.42Pkp4'protein_coding'326AEGain9.826EU ES E11a_E12a40.00
2324655.40Hps3'protein_coding'220AEGain11.245EU AB E14_Da0
2334685.39Ablim3'protein_coding'123DEGain42.040N/AAblim3N/A
2344735.38Sult1d1'protein_coding'211DEGain41.594EU AB Sult1d10.00
2354755.37Trnt1'protein_coding'517AEGain15.2312EU ES AB E9_Aa100.00
2364795.37Lrrfip2'protein_coding'330AEGain8.074EU ES E7a_E17a33.33
2374805.36Shroom3'protein_coding'313AEGain5.294EU E1a_E2a66.67
2384875.34Slc12a9'protein_coding'114AEGain9.874EU AB CE E2_Aa0
2394905.33Ugt2b37'protein_coding'16DEGain40.250N/AUgt2b37N/A
2404925.33Asgr1'protein_coding'310DEGain40.191ES Asgr10
2414935.33Zbtb45'protein_coding'13AEGain6.665AB IR I20
2424955.32Nufip2'protein_coding'25AEGain8.838EU AB CE E4_Da0
2434965.31Sfpq'protein_coding'110AEGain5.933EU I9_SR20
2445025.30Hnmt'protein_coding'311DEGain39.510N/AHnmtN/A
2455045.30RP24-69M4.3'processed_pseudogene'11DEGain39.340N/ARP24-69M4.3N/A
2465055.29Ugt3a1'protein_coding'17DEGain39.232EU Ugt3a1100.00
2475115.28Arfgef1'protein_coding'138AEGain23.449EU E13a_E14a75.00
2485135.28Cyp2c70'protein_coding'19DEGain38.912EU Cyp2c700.00
2495175.27Saa1'protein_coding'14DEGain38.640N/ASaa1N/A
2505215.26Cp'protein_coding'630DEGain38.328EU AB Cp50.00
2515245.26Cfh'protein_coding'327DEGain38.232EU Cfh0.00


Candidate Differential and Alternative Expression Genes (Loss ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1115.17H19'protein_coding'15DELoss-36874.800N/AH19N/A
2214.71Afp'protein_coding'115DELoss-26807.800N/AAfpN/A
3314.32Slc38a4'protein_coding'116AELoss-140.723EU CE E1a_E2a100.00
4613.51Dlk1'protein_coding'615DELoss-11627.710N/ADlk1N/A
5713.21Igf2'protein_coding'613DELoss-9484.880N/AIgf2N/A
61511.80Fn1'protein_coding'347AELoss-1491.147EU E24a_E25a50.00
72310.73Gpc3'protein_coding'29DELoss-1702.310N/AGpc3N/A
82910.37Phgdh'protein_coding'112DELoss-1325.940N/APhgdhN/A
93110.08Bex2'protein_coding'13DELoss-1085.300N/ABex2N/A
10349.97Bex1'protein_coding'37DELoss-1000.620N/ABex1N/A
11419.73Dusp9'protein_coding'14DELoss-846.760N/ADusp9N/A
12439.55Psat1'protein_coding'19DELoss-750.250N/APsat1N/A
13509.36Pnliprp1'protein_coding'113DELoss-658.780N/APnliprp1N/A
14569.23Shbg'protein_coding'18DELoss-601.930N/AShbgN/A
15599.06St3gal1'protein_coding'313AELoss-22.205EU AB CE E3_Aa100.00
16609.06Cited1'protein_coding'36DELoss-532.850N/ACited1N/A
17619.05Fosb'protein_coding'14DELoss-528.280N/AFosbN/A
18639.01SNORD113'snoRNA'11DELoss-515.040N/ASNORD113N/A
19668.88Slc4a1'protein_coding'120DELoss-471.290N/ASlc4a1N/A
20688.82A2m'protein_coding'136DELoss-451.340N/AA2mN/A
21708.79Pemt'protein_coding'614AELoss-3.455EU AB ER1a66.67
22738.68Krt20'protein_coding'18DELoss-409.160N/AKrt20N/A
23748.68Spink3'protein_coding'14DELoss-408.770N/ASpink3N/A
24788.64Igsf1'protein_coding'528DELoss-398.650N/AIgsf1N/A
25798.63Bex4'protein_coding'25DELoss-397.120N/ABex4N/A
26838.47Nedd4l'protein_coding'333AELoss-17.503EU ES E14a_E16a0.00
27858.43Hbb-y'protein_coding'13DELoss-346.000N/AHbb-yN/A
28908.38Grb10'protein_coding'621DELoss-333.818EU ES AB Grb1033.33
29938.23Bnip3l'protein_coding'29AELoss-21.942AB CE I1_AR20
30948.22Pcdh24'protein_coding'132DELoss-298.280N/APcdh24N/A
31978.15Trim2'protein_coding'722AELoss-35.575EU ES AB ER2a0.00
32988.14Hbb-b1'protein_coding'13DELoss-282.200N/AHbb-b1N/A
33998.13Asns'protein_coding'214DELoss-281.050N/AAsnsN/A
341008.13Trip4'protein_coding'524AELoss-30.014AB IR CE I1_AR30
351038.11Ngfrap1'protein_coding'37DELoss-275.733EU AB Ngfrap10.00
361068.05Acox1'protein_coding'316AELoss-7.957EU ES E8a_E10a66.67
371087.99Cdkn1c'protein_coding'14DELoss-253.631EU Cdkn1c0
381097.95Igf2bp1'protein_coding'115DELoss-247.610N/AIgf2bp1N/A
391117.93Mogat2'protein_coding'16DELoss-243.900N/AMogat2N/A
401187.84Slc36a2'protein_coding'110DELoss-229.770N/ASlc36a2N/A
411217.777SK'misc_RNA'11DELoss-218.920N/A7SKN/A
421237.77Acss1'protein_coding'114DELoss-218.360N/AAcss1N/A
431267.71Phlda2'protein_coding'12DELoss-208.770N/APhlda2N/A
441277.70Rrm2b'protein_coding'19AELoss-20.802CE I5_AR10
451317.65Col1a1'protein_coding'252DELoss-200.239EU AB Col1a142.86
461327.60Itm2a'protein_coding'16DELoss-193.990N/AItm2aN/A
471387.55Scd2'protein_coding'16DELoss-187.791EU Scd20
481467.40Fos'protein_coding'14DELoss-168.930N/AFosN/A
491507.36AC175538.1'protein_coding'12DELoss-163.760N/AAC175538.1N/A
501547.27Tomm40l'protein_coding'313AELoss-16.0230EU AB IR E1a_E2b61.54
511557.26Apoo'protein_coding'414AELoss-15.272EU ER4a100.00
521567.26Meg3'protein_coding'15DELoss-153.204IR Meg30
531577.23AL606704.20'pseudogene'12DELoss-150.630N/AAL606704.20N/A
541587.23Hba-a1'protein_coding'26DELoss-150.070N/AHba-a1N/A
551617.18Nope'protein_coding'222DELoss-145.340N/ANopeN/A
561637.15Acot3'protein_coding'38AELoss-4.111AB E2_Aa0
571667.10Macrod1'protein_coding'111AELoss-5.011IR Ix0
581677.08Hsd3b1'protein_coding'28DELoss-135.280N/AHsd3b1N/A
591697.07Eno1'protein_coding'315AELoss-182.783EU ES ER5a0.00
601757.00Hkdc1'protein_coding'118DELoss-127.780N/AHkdc1N/A
611776.97H1fx'protein_coding'11DELoss-125.590N/AH1fxN/A
621796.96AC159106.3'protein_coding'17DELoss-124.480N/AAC159106.3N/A
631826.95Depdc6'protein_coding'311AELoss-19.422EU AB ER2a0
641846.94Capn6'protein_coding'113DELoss-122.380N/ACapn6N/A
651856.93Ccne1'protein_coding'214DELoss-121.850N/ACcne1N/A
661896.90Gipc2'protein_coding'16DELoss-119.560N/AGipc2N/A
671916.85Atf3'protein_coding'14DELoss-115.210N/AAtf3N/A
681936.84Hlf'protein_coding'511AELoss-27.6111EU ES AB ER2a83.33
691956.82mmu-mir-699'miRNA'11DELoss-112.640N/Ammu-mir-699N/A
701976.80Srr'protein_coding'617AELoss-4.423AB E8_Aa0
711986.77Bcas1'protein_coding'316DELoss-109.510N/ABcas1N/A
721996.776720460F02Rik'protein_coding'16DELoss-109.500N/A6720460F02RikN/A
732016.77Pnkd'protein_coding'417AELoss-6.916EU ES AB E2a_E5a75.00
742026.77Slc39a5'protein_coding'112DELoss-108.831EU Slc39a50
752036.76Mdk'protein_coding'59DELoss-108.370N/AMdkN/A
762046.75Gypa'protein_coding'18DELoss-107.890N/AGypaN/A
772066.73Uhrf1'protein_coding'422DELoss-106.100N/AUhrf1N/A
782076.72Hbb-b2'protein_coding'13DELoss-105.280N/AHbb-b2N/A
792106.68Plagl1'protein_coding'625DELoss-102.470N/APlagl1N/A
802126.67Naaladl1'protein_coding'118DELoss-102.040N/ANaaladl1N/A
812136.65Igf2bp3'protein_coding'115DELoss-100.100N/AIgf2bp3N/A
822156.64Rbp2'protein_coding'14DELoss-99.510N/ARbp2N/A
832176.63Hba-a2'protein_coding'26DELoss-99.310N/AHba-a2N/A
842186.63Epb4.1l5'protein_coding'226AELoss-25.1519EU ES CE E25a_E26a94.12
852206.63Eif2s3x'protein_coding'213AELoss-14.953EU ER4a50.00
862236.61Pecam1'protein_coding'520AELoss-6.405EU ES ER1a0.00
872256.61Pklr'protein_coding'212AELoss-25.683EU ENSMUST0000004711150.00
882296.56Mcm2'protein_coding'116DELoss-38.072EU Mcm2100.00
892316.54Tceal5'protein_coding'13DELoss-92.960N/ATceal5N/A
902326.53Nphp3'protein_coding'654AELoss-8.1059EU AB ER10a94.44
912346.50Lgals2'protein_coding'14DELoss-90.650N/ALgals2N/A
922356.49mmu-mir-410'miRNA'11DELoss-89.910N/Ammu-mir-410N/A
932366.48Pnliprp2'protein_coding'112DELoss-89.460N/APnliprp2N/A
942386.47Mfap2'protein_coding'29DELoss-88.910N/AMfap2N/A
952396.47Ptk7'protein_coding'120DELoss-88.510N/APtk7N/A
962406.47Hmga2'protein_coding'15DELoss-88.480N/AHmga2N/A
972416.47Hba-x'protein_coding'13DELoss-88.370N/AHba-xN/A
982426.46Miox'protein_coding'110DELoss-88.230N/AMioxN/A
992436.45Peg3'protein_coding'212DELoss-87.677EU Peg350.00
1002466.45Snca'protein_coding'16DELoss-87.270N/ASncaN/A
1012486.42Upk3b'protein_coding'16DELoss-85.880N/AUpk3bN/A
1022496.411100001E04Rik'protein_coding'213DELoss-85.300N/A1100001E04RikN/A
1032506.41Zc3h7a'protein_coding'123AELoss-35.7310AB IR I190
1042516.41Birc5'protein_coding'35DELoss-84.820N/ABirc5N/A
1052536.37Zim1'protein_coding'210DELoss-82.970N/AZim1N/A
1062556.36snoU2-30'snoRNA'11DELoss-82.390N/AsnoU2-30N/A
1072566.36AC160935.2'miRNA'11DELoss-82.090N/AAC160935.2N/A
1082576.36Tmem219'protein_coding'513AELoss-8.125EU ES ER3a75.00
1092596.342810417H13Rik'protein_coding'14DELoss-81.080N/A2810417H13RikN/A
1102616.31Fgfr3'protein_coding'425AELoss-17.066EU ES AB E8a_E8c25.00
1112626.31Acat3'protein_coding'19AELoss-3.566EU AB IR I8_AR10.00
1122646.28Cdc20'protein_coding'210DELoss-77.850N/ACdc20N/A
1132656.27Sall4'protein_coding'58DELoss-77.280N/ASall4N/A
1142666.27Trim10'protein_coding'17DELoss-77.050N/ATrim10N/A
1152676.26Plk1'protein_coding'110DELoss-76.750N/APlk1N/A
1162706.231200009I06Rik'protein_coding'215DELoss-75.100N/A1200009I06RikN/A
1172716.23Dctd'protein_coding'27DELoss-75.040N/ADctdN/A
1182766.19Sfrp1'protein_coding'13DELoss-73.080N/ASfrp1N/A
1192776.19Mthfd1l'protein_coding'433DELoss-73.070N/AMthfd1lN/A
1202786.19Ggt1'protein_coding'113DELoss-73.070N/AGgt1N/A
1212796.19Mgst2'protein_coding'15DELoss-72.990N/AMgst2N/A
1222826.16Tff3'protein_coding'13DELoss-71.520N/ATff3N/A
1232836.15Slc25a25'protein_coding'616AELoss-10.631ES E1a_E5a0
1242846.15Fbn2'protein_coding'269DELoss-70.990N/AFbn2N/A
1252866.14Tnnc1'protein_coding'16DELoss-70.640N/ATnnc1N/A
1262876.14Mtus1'protein_coding'724AELoss-5.113EU ENSMUST0000011773550.00
1272886.13Hbb-bh1'protein_coding'13DELoss-70.270N/AHbb-bh1N/A
1282896.12Fbln1'protein_coding'218DELoss-69.570N/AFbln1N/A
1292906.12Trim71'protein_coding'14DELoss-69.410N/ATrim71N/A
1302946.11Mest'protein_coding'214DELoss-68.953EU Mest50.00
1312956.11Mpo'protein_coding'318DELoss-68.950N/AMpoN/A
1323006.06Osbpl1a'protein_coding'1045AELoss-10.4822EU ES E3a_E4a57.14
1333036.05Egr2'protein_coding'25DELoss-66.100N/AEgr2N/A
1343046.04Cyp4f13'protein_coding'113AELoss-4.351AB E1_Da0
1353086.02Ctage5'protein_coding'225AELoss-10.495EU ES E5a_E7a50.00
1363096.02Aurkb'protein_coding'211DELoss-64.990N/AAurkbN/A
1373126.01Psph'protein_coding'310DELoss-27.983EU AB Psph100.00
1383145.99Ccnb2'protein_coding'19DELoss-63.700N/ACcnb2N/A
1393155.99Itih4'protein_coding'325AELoss-6.241ES E13a_E15a0
1403175.98Gsn'protein_coding'219DELoss-63.270N/AGsnN/A
1413195.98Pltp'protein_coding'318AELoss-3.503EU AB E14_Da0
1423205.98Maff'protein_coding'13DELoss-62.930N/AMaffN/A
1433215.97Anpep'protein_coding'223AELoss-59.791EU E1a_E2a0
1443235.96mmu-mir-493'miRNA'11DELoss-62.310N/Ammu-mir-493N/A
1453245.95Ccnb1'protein_coding'29DELoss-61.890N/ACcnb1N/A
1463295.92mmu-mir-689-1'miRNA'11DELoss-60.630N/Ammu-mir-689-1N/A
1473305.92Slc45a3'protein_coding'27AELoss-7.236EU ES AB E1a_E3a100.00
1483315.91Nsfl1c'protein_coding'310AELoss-62.203EU E3a_E4a100.00
1493325.91Rfx5'protein_coding'621AELoss-6.752EU ER1a0.00
1503335.90Cpm'protein_coding'19DELoss-59.700N/ACpmN/A
1513345.88Nt5dc2'protein_coding'113DELoss-59.050N/ANt5dc2N/A
1523355.88Aebp1'protein_coding'324DELoss-58.960N/AAebp1N/A
1533385.87Ube2c'protein_coding'27DELoss-58.372EU Ube2c0.00
1543395.86Plp2'protein_coding'15DELoss-58.260N/APlp2N/A
1553405.86Cdca3'protein_coding'16DELoss-58.171EU Cdca30
1563415.84Obsl1'protein_coding'528DELoss-57.180N/AObsl1N/A
1573425.84Mcoln2'protein_coding'215DELoss-57.160N/AMcoln2N/A
1583435.82Cand2'protein_coding'115DELoss-56.680N/ACand2N/A
1593475.81Stfa1'protein_coding'13DELoss-56.110N/AStfa1N/A
1603495.80Nrk'protein_coding'232DELoss-55.550N/ANrkN/A
1613515.79Spire2'protein_coding'115DELoss-55.280N/ASpire2N/A
1623535.78Gins2'protein_coding'15DELoss-55.030N/AGins2N/A
1633555.78Eif4a2'protein_coding'314AELoss-12.655EU ES E3a_E6a25.00
1643565.786030405A18Rik'protein_coding'13DELoss-54.810N/A6030405A18RikN/A
1653575.77Mcm5'protein_coding'117DELoss-54.670N/AMcm5N/A
1663595.76Flnc'protein_coding'451DELoss-54.060N/AFlncN/A
1673625.73Kel'protein_coding'119DELoss-53.130N/AKelN/A
1683645.73Greb1'protein_coding'234DELoss-53.050N/AGreb1N/A
1693655.73Cdc2a'protein_coding'211DELoss-53.020N/ACdc2aN/A
1703665.73Rhd'protein_coding'110DELoss-52.920N/ARhdN/A
1713685.712900062L11Rik'protein_coding'11DELoss-52.410N/A2900062L11RikN/A
1723705.71Mki67'protein_coding'117DELoss-52.197EU Mki6750.00
1733715.71RP23-275N21.2'protein_coding'38AELoss-7.362EU AB ER1a0
1743735.70Baiap2l2'protein_coding'114DELoss-51.940N/ABaiap2l2N/A
1753745.70Col9a2'protein_coding'132DELoss-51.870N/ACol9a2N/A
1763775.69Npr1'protein_coding'122AELoss-3.7719EU AB E21_Aa47.06
1773785.69Racgap1'protein_coding'117DELoss-51.540N/ARacgap1N/A
1783795.69Tpx2'protein_coding'220DELoss-51.470N/ATpx2N/A
1793805.69Fpgs'protein_coding'216AELoss-7.052EU ENSMUST00000028148100.00
1803865.67Kif2c'protein_coding'222DELoss-50.910N/AKif2cN/A
1813875.66Kif22'protein_coding'216DELoss-50.690N/AKif22N/A
1823895.65Zfp385a'protein_coding'110AELoss-65.864EU CE I1_AR1100.00
1833905.652610318N02Rik'protein_coding'29DELoss-50.350N/A2610318N02RikN/A
1843915.65Cdkn3'protein_coding'18DELoss-50.280N/ACdkn3N/A
1853965.64Mybl2'protein_coding'215DELoss-49.870N/AMybl2N/A
1863995.64Espl1'protein_coding'131DELoss-49.730N/AEspl1N/A
1874005.63Dusp5'protein_coding'14DELoss-49.590N/ADusp5N/A
1884015.62Hemgn'protein_coding'27DELoss-49.180N/AHemgnN/A
1894025.62SNORD113'snoRNA'11DELoss-49.130N/ASNORD113N/A
1904035.62Smurf2'protein_coding'320AELoss-6.886EU CE I9_AR5100.00
1914045.61Eif5'protein_coding'314AELoss-10.663EU ES E3a_E3c0.00
1924055.60Ldhb'protein_coding'18DELoss-48.590N/ALdhbN/A
1934065.60Cdh3'protein_coding'116DELoss-48.490N/ACdh3N/A
1944085.59Top2a'protein_coding'136DELoss-48.2116EU CE Top2a57.14
1954105.58Ssbp3'protein_coding'519AELoss-47.723EU E6a_E7a100.00
1964115.58Igf2bp2'protein_coding'319DELoss-47.970N/AIgf2bp2N/A
1974125.58Asb4'protein_coding'310DELoss-47.800N/AAsb4N/A
1984155.56Foxm1'protein_coding'210DELoss-47.100N/AFoxm1N/A
1994165.55Arap1'protein_coding'639AELoss-21.3512EU ES AB E16a_E17a90.00
2004175.55Myo1b'protein_coding'433AELoss-6.4210EU ES AB CE ER24a66.67
2014185.54Zc3hav1l'protein_coding'14DELoss-46.660N/AZc3hav1lN/A
2024225.53Aplp1'protein_coding'220DELoss-46.270N/AAplp1N/A
2034245.52Jun'protein_coding'23DELoss-45.930N/AJunN/A
2044255.52Fhl2'protein_coding'16DELoss-45.930N/AFhl2N/A
2054265.52Plekha6'protein_coding'329AELoss-29.707EU ES AB E25a_E27a33.33
2064275.52CT030732.13'protein_coding'215DELoss-45.810N/ACT030732.13N/A
2074285.52Slc22a8'protein_coding'112DELoss-45.790N/ASlc22a8N/A
2084295.51Slc25a4'protein_coding'14DELoss-45.720N/ASlc25a4N/A
2094305.51Zcchc5'protein_coding'12DELoss-45.700N/AZcchc5N/A
2104315.51RP23-38E20.5'protein_coding'11DELoss-45.560N/ARP23-38E20.5N/A
2114325.51Cxcl10'protein_coding'26DELoss-45.470N/ACxcl10N/A
2124335.51Fabp5'protein_coding'14DELoss-45.470N/AFabp5N/A
2134345.50Adar'protein_coding'620AELoss-21.282EU ER1a0.00
2144385.49Atp8a2'protein_coding'237DELoss-44.960N/AAtp8a2N/A
2154395.49Fmr1'protein_coding'1032AELoss-23.3720EU AB ER1a75.00
2164405.48Aph1a'protein_coding'28AELoss-27.912EU ER6c0.00
2174415.48Golm1'protein_coding'211DELoss-44.583EU ES Golm150.00
2184425.48Ank1'protein_coding'1262DELoss-44.550N/AAnk1N/A
2194435.48Cd68'protein_coding'29AELoss-7.6117EU AB IR I40.00
2204445.47Kif12'protein_coding'119DELoss-44.460N/AKif12N/A
2214455.47Hif3a'protein_coding'321DELoss-44.430N/AHif3aN/A
2224465.472010204K13Rik'protein_coding'12DELoss-44.360N/A2010204K13RikN/A
2234475.47Tmcc2'protein_coding'15DELoss-20.714EU Tmcc2100.00
2244505.46Serpine1'protein_coding'212DELoss-44.020N/ASerpine1N/A
2254525.45Ccna2'protein_coding'18DELoss-43.785EU Ccna250.00
2264545.44Col6a2'protein_coding'230DELoss-43.540N/ACol6a2N/A
2274555.44D2Ertd750e'protein_coding'211DELoss-43.520N/AD2Ertd750eN/A
2284565.44Bub1b'protein_coding'123DELoss-43.510N/ABub1bN/A
2294575.44AI449175'protein_coding'27AELoss-7.733EU ES AB E1a_E3a100.00
2304585.43Fam55b'protein_coding'16AELoss-4.052EU CE I2_AR20
2314615.43Ngp'protein_coding'14DELoss-43.050N/ANgpN/A
2324635.41Hist1h4a'protein_coding'22DELoss-42.600N/AHist1h4aN/A
2334645.41Fkbp10'protein_coding'210DELoss-42.540N/AFkbp10N/A
2344665.40mmu-mir-665'miRNA'11DELoss-42.190N/Ammu-mir-665N/A
2354675.40Gulo'protein_coding'112AELoss-21.431ES E7a_E9a0
2364695.39Pbk'protein_coding'18DELoss-42.030N/APbkN/A
2374705.39Xpr1'protein_coding'421AELoss-10.905EU AB ER1b50.00
2384715.39Son'protein_coding'621AELoss-21.906EU AB CE E1a_E2a66.67
2394725.38Eme1'protein_coding'19DELoss-41.650N/AEme1N/A
2404745.37Adam12'protein_coding'123DELoss-41.470N/AAdam12N/A
2414765.37Zcchc3'protein_coding'11DELoss-41.330N/AZcchc3N/A
2424775.37Steap1'protein_coding'15DELoss-41.330N/ASteap1N/A
2434785.37Net1'protein_coding'213AELoss-33.934EU ES ER3a66.67
2444815.36Kif18b'protein_coding'116DELoss-41.110N/AKif18bN/A
2454825.36Nnat'protein_coding'310DELoss-41.056EU AB Nnat33.33
2464835.35Cgref1'protein_coding'16DELoss-40.920N/ACgref1N/A
2474845.35Fbln2'protein_coding'218DELoss-40.890N/AFbln2N/A
2484855.35Snx32'protein_coding'113AELoss-6.389EU AB IR E11_Da100.00
2494865.34Dnm1'protein_coding'1036DELoss-40.530N/ADnm1N/A
2504885.33Col1a2'protein_coding'152DELoss-40.262EU Col1a20.00
2514895.33Rbm38'protein_coding'14DELoss-40.250N/ARbm38N/A