Summary page for comparison: 'DLBCL_vs_BCell4' (HS0640_vs_HS1045) - Project: Lymphoma


Download complete candidate list as tab delimited text file: DLBCL_vs_BCell4.txt


Summary of Differential (DE) and Alternative Expression (AE) for all gene loci:

Total Candidate Genes: 10,389 (of 36,953 possible genes)

DE Genes: 5,957

AE Genes: 7,271

Alternative Exon Usage (EU) Genes: 5,947

Alernative Exon Skipping (ES) Genes: 1,281

Alternative Exon Boundary (AB) Genes: 2,582

Intron Retention (IR) Genes: 601

Cryptic Exon (CE) Genes: 898


Candidate Differential AND Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1115.58BRE'protein_coding'721AELoss-1448.8311EU AB IR I1_AR175.00
2214.56HLA-DRB1'protein_coding'16AELoss-823.353EU E2a_E3a50.00
3314.27HLA-B'protein_coding'521AELoss-579.017EU E3a_E4a33.33
4413.28RPL7'protein_coding'517AELoss-313.0518EU ES AB CE ER7a63.64
5512.84RPL28'protein_coding'15AELoss-1797.624EU AB ER3a0.00
6612.23PTPRG'protein_coding'439AELoss-82.507EU CE I1_AR3866.67
7712.17TOR1AIP1'protein_coding'415AELoss-102.253EU AB E2a_E3a100.00
8812.01HLA-DQA1'protein_coding'411AEGain1846.0210EU AB E4a_E4b57.14
9911.28HLA-DQB1'protein_coding'817AELoss-96.595EU ES AB E6a_E9a33.33
101011.17AL671277.5'protein_coding'112AELoss-38.0822EU AB IR CE E7_Aa75.00
111110.82PCNP'protein_coding'25AELoss-61.917EU AB IR I1_SR150.00
121210.56FNIP1'protein_coding'320AELoss-74.678EU AB CE I15_AR166.67
131310.53HLA-A'protein_coding'723AEGain600.153EU AB E8b_E9a100.00
141410.19WDR68'protein_coding'18AELoss-54.926EU E5a_E6a100.00
15159.80RPL37'protein_coding'28AELoss-1286.849EU ES AB ER2b66.67
16169.73TBC1D4'protein_coding'221AELoss-30.2833EU ES AB CE ER9a88.89
17179.62SEPP1'protein_coding'14DEGain789.430N/ASEPP1N/A
18189.27CXCL9'protein_coding'14DEGain616.360N/ACXCL9N/A
19199.17AC004833.1'pseudogene'13AELoss-36.722AB E2_Da0
20209.17AC004448.3'pseudogene'12AELoss-4.373EU AB E2_Aa0
21219.00CCL19'protein_coding'26DEGain510.930N/ACCL19N/A
22228.96IGHD'IG_C_gene'27DELoss-499.420N/AIGHDN/A
23238.88RPL23A'protein_coding'39AELoss-161.109EU IR ER4a60.00
24248.74TAOK3'protein_coding'225AELoss-47.7015EU CE I3_AR657.14
25258.72C15orf57'protein_coding'25AELoss-68.922EU ES E1a_E3a100.00
26268.72LUM'protein_coding'13DEGain422.500N/ALUMN/A
27278.71TMEM66'protein_coding'16AELoss-37.792EU CE I1_AR20
28288.65PRPF18'protein_coding'419AELoss-149.4110EU ES AB E3_Da20.00
29298.53APOE'protein_coding'14DEGain370.693EU APOE50.00
30308.53CCL21'protein_coding'26DEGain370.400N/ACCL21N/A
31318.45FOSB'protein_coding'14DELoss-349.733EU AB FOSB0
32328.43D87015.2'miRNA'11DELoss-344.640N/AD87015.2N/A
33338.42TRAPPC10'protein_coding'224AELoss-40.242EU I3_SR10
34348.31RP11-488L18.4'unprocessed_pseudogene'14AELoss-13.582EU E3a_E4a0
35358.28HLA-DRB5'protein_coding'27AELoss-245.273EU ER7a0.00
36368.23AL163011.3'rRNA_pseudogene'11DELoss-299.390N/AAL163011.3N/A
37378.22BGN'protein_coding'211DEGain298.590N/ABGNN/A
38388.19HLA-J'protein_coding'412AELoss-19.599EU AB E1_Da66.67
39398.17HIST1H2AC'protein_coding'35AELoss-18.272EU AB E3_Aa0
40408.16AC112777.7'rRNA_pseudogene'11DELoss-285.720N/AAC112777.7N/A
41418.12AP1G2'protein_coding'223AELoss-41.1815ES AB IR CE E18a_E20a0.00
42428.12ADAM10'protein_coding'426AELoss-20.829EU ES AB CE I4_AR150.00
43438.12AC010970.2'processed_pseudogene'11DELoss-278.380N/AAC010970.2N/A
44448.09AC004866.1'rRNA_pseudogene'11DELoss-273.300N/AAC004866.1N/A
45458.08SMARCA5'protein_coding'124AELoss-13.835EU ES E13a_E15a50.00
46468.06FAM172A'protein_coding'213AELoss-17.8911EU CE I10_AR210.00
47478.00SPARC'protein_coding'110DEGain256.023EU SPARC50.00
48487.97IGFBP7'protein_coding'15DEGain250.950N/AIGFBP7N/A
49497.97AC091982.3'pseudogene'12AELoss-23.051AB E2_Aa0
50507.97SLC40A1'protein_coding'18DEGain250.130N/ASLC40A1N/A
51517.96ESNA1'protein_coding'522AELoss-19.9211EU ES AB CE I12_AR175.00
52527.94CWC15'protein_coding'18AELoss-23.473EU AB E6a_E7a0.00
53537.91GAB1'protein_coding'212AELoss-24.012EU CE I3_AR40
54547.90AC044839.16'rRNA_pseudogene'11DELoss-238.350N/AAC044839.16N/A
55557.89C3'protein_coding'141DEGain236.730N/AC3N/A
56567.87RNGTT'protein_coding'318AELoss-12.3515EU AB CE E1a_E2a41.67
57577.86FER'protein_coding'120AELoss-30.865EU CE I2_AR20.00
58587.81TMEM119'protein_coding'25AELoss-2.343AB E2_Ab0
59597.80CCDC152'protein_coding'19DEGain75.514EU CCDC152100.00
60607.78IL18'protein_coding'16DEGain74.845EU IL1875.00
61617.77AC010468.5'pseudogene'12AELoss-28.501EU E1a_E2a0
62627.76SNX6'protein_coding'420AELoss-10.1314EU CE I11_SR290.91
63637.75ENPP2'protein_coding'226DEGain214.600N/AENPP2N/A
64647.73H3F3A'protein_coding'411AELoss-21.6111EU AB IR E2_Da40.00
65657.73COL3A1'protein_coding'254DEGain212.690N/ACOL3A1N/A
66667.69COL1A2'protein_coding'254DEGain206.770N/ACOL1A2N/A
67677.68C1orf71'protein_coding'315AELoss-22.552EU CE I2_AR10
68687.64IGHV4-31'IG_C_gene'27AEGain3.582EU E4a_E5a0.00
69697.63NLRC3'protein_coding'325AELoss-26.171EU E10a_E11a0
70707.60FAM152A'protein_coding'512AELoss-17.394EU IR I1100.00
71717.60SCP2'protein_coding'521AELoss-16.125EU CE I12_AR150.00
72727.58FN1'protein_coding'1050DEGain191.690N/AFN1N/A
73737.54AC022210.8'pseudogene'13AEGain30.273EU ES AB E1_Da100.00
74747.53SLC37A1'protein_coding'323AELoss-32.4820ES AB IR CE E6_Da0
75757.51PLA2G2D'protein_coding'14DEGain181.873EU PLA2G2D50.00
76767.49A2M'protein_coding'240DEGain180.130N/AA2MN/A
77777.48APOC1'protein_coding'15DEGain178.990N/AAPOC1N/A
78787.46TIMP3'protein_coding'28DEGain176.190N/ATIMP3N/A
79797.44RP5-1022P6.2'protein_coding'220AELoss-12.8010EU CE I2_AR175.00
80807.41MGEA5'protein_coding'318AELoss-20.403EU CE I9_AR10
81817.37C1QB'protein_coding'13DEGain165.680N/AC1QBN/A
82827.35MED12L'protein_coding'245AEGain20.8612EU ES AB CE I15_AR125.00
83837.34TCTN1'protein_coding'827AELoss-3.0818EU ES AB CE E3_Aa53.85
84847.33MOBKL3'protein_coding'616AELoss-21.2916EU ES AB E2a_E5a72.73
85857.32SERPING1'protein_coding'617DEGain159.900N/ASERPING1N/A
86867.32LYZ'protein_coding'14DEGain159.342EU LYZ100.00
87877.30CCL2'protein_coding'13DEGain158.020N/ACCL2N/A
88887.28SSU_rRNA_5'rRNA'11DELoss-155.610N/ASSU_rRNA_5N/A
89897.28D87024.1'miRNA'11DELoss-155.520N/AD87024.1N/A
90907.25IGL@'IG_V_gene'12DELoss-152.460N/AIGL@N/A
91917.23POSTN'protein_coding'524DEGain150.570N/APOSTNN/A
92927.23MMP9'protein_coding'113DEGain149.686EU MMP980.00
93937.16RPL9'protein_coding'18AEGain3.3310EU AB IR E6a_E7a40.00
94947.16IGHG4'IG_C_gene'29AELoss-5.039EU AB E1_Da66.67
95957.15FCER1G'protein_coding'27AELoss-2.066EU AB E6_Aa50.00
96967.14SAPS1'protein_coding'124AELoss-114.021EU E17a_E18a0
97977.11PSMA8'protein_coding'29AELoss-6.404EU CE I4_AR1100.00
98987.10RPA3'protein_coding'517AEGain14.0712EU AB CE ENST0000040277183.33
99997.09HNRPDL'protein_coding'210AEGain57.018EU AB IR E8_Aa33.33
1001007.08UCHL5'protein_coding'927AELoss-11.6323EU AB IR CE ER2d78.57
1011017.08FSTL1'protein_coding'111DEGain135.530N/AFSTL1N/A
1021027.07LMO4'protein_coding'38AEGain59.294EU ES AB E6_Db0.00
1031037.07SPARCL1'protein_coding'111DEGain134.300N/ASPARCL1N/A
1041047.06PHIP'protein_coding'242AELoss-20.8814EU AB CE I4_SR150.00
1051057.06IGHE'IG_C_gene'211DEGain133.053EU AB CE IGHE0
1061067.05ANP32E'protein_coding'514AELoss-10.976EU AB ER1a75.00
1071077.05HLA-DQB2'protein_coding'49AEGain3.915EU ER5a50.00
1081087.04FAM3C'protein_coding'110AELoss-14.595EU E6a_E7a0.00
1091097.01AC026250.16'protein_coding'112AELoss-12.577EU ES AB E9_Da100.00
1101107.01RARRES1'protein_coding'16DEGain128.910N/ARARRES1N/A
1111117.00ADD1'protein_coding'624AELoss-14.957EU ER18a66.67
1121126.99CREB5'protein_coding'616AELoss-14.799EU ES AB CE I1_AR340.00
1131136.99C8orf76'protein_coding'29AELoss-15.031I4_SR10
1141146.99GOLT1B'protein_coding'15AELoss-7.991ES E2a_E4a0
1151156.99TM9SF3'protein_coding'115AELoss-10.758EU CE I4_AR166.67
1161166.97C7orf10'protein_coding'319AELoss-102.121CE I15_AR100
1171176.97ARG2'protein_coding'18AEGain6.0922EU AB IR I691.67
1181186.96CREBZF'protein_coding'25AEGain39.303EU AB ER2b100.00
1191196.95PI4KA'protein_coding'258AEGain18.523EU AB E51a_E52a0.00
1201206.94FOXN3'protein_coding'27AELoss-12.533EU AB E2_Da100.00
1211216.93ADAMDEC1'protein_coding'215DEGain122.300N/AADAMDEC1N/A
1221226.93MS4A6A'protein_coding'17DEGain122.050N/AMS4A6AN/A
1231236.92TMEM176B'protein_coding'29DEGain121.283EU TMEM176B0.00
1241246.92CEP57'protein_coding'211AELoss-12.166EU ES E6a_E9a0.00
1251256.91C1QA'protein_coding'311DEGain120.180N/AC1QAN/A
1261266.88NR4A1'protein_coding'615DELoss-117.577EU ES AB NR4A10.00
1271276.86RHBDD1'protein_coding'311AELoss-15.823AB CE E1_Da0
1281286.86SMC4'protein_coding'429AELoss-13.4027EU ES AB IR ER2b80.95
1291296.84GPNMB'protein_coding'314DEGain114.900N/AGPNMBN/A
1301306.83TTC3'protein_coding'451AELoss-10.6829EU ES E45a_E47a64.29
1311316.82MAG'protein_coding'314AEGain42.115EU E10a_E11a75.00
1321326.82ERBB2IP'protein_coding'628AELoss-17.6925EU ES CE E22a_E23a69.57
1331336.79IGLV2-5'IG_pseudogene'11DELoss-110.460N/AIGLV2-5N/A
1341346.79ATAD2B'protein_coding'231AELoss-12.6412EU AB CE I1_AR133.33
1351356.78CTSL1'protein_coding'414DEGain109.540N/ACTSL1N/A
1361366.77C9orf41'protein_coding'311AELoss-6.487EU AB CE E1_Ab75.00
1371376.77CDK6'protein_coding'18AELoss-10.957EU AB IR CE I2_AR10.00
1381386.77SSU_rRNA_5'rRNA'11DELoss-108.830N/ASSU_rRNA_5N/A
1391396.75THY1'protein_coding'14DEGain107.420N/ATHY1N/A
1401406.74RB1'protein_coding'127AELoss-12.5914EU CE I1_AR670.00
1411416.72PLEKHK1'protein_coding'417AELoss-17.898EU AB ER1a40.00
1421426.72KIAA0430'protein_coding'332AELoss-12.292ES E24a_E27a0.00
1431436.72TGFBR2'protein_coding'311AELoss-11.971CE I1_AR20
1441446.70PIN4'protein_coding'37AEGain21.422EU ES E1a_E3a0.00
1451456.70TMEM167A'protein_coding'14AELoss-10.891I1_SR20
1461466.68ANKRD46'protein_coding'39AELoss-6.737EU AB CE E1_Da66.67
1471476.66TMED5'protein_coding'37AELoss-6.594EU CE I1_AR10.00
1481486.66CSF1R'protein_coding'224DEGain101.370N/ACSF1RN/A
1491496.63BTNL9'protein_coding'420DEGain99.220N/ABTNL9N/A
1501506.63HSD17B4'protein_coding'124AELoss-6.805EU CE I2_AR466.67
1511516.63KIAA1033'protein_coding'234AELoss-8.2010EU ES E24a_E25a44.44
1521526.62CCDC90B'protein_coding'19AELoss-4.5312EU ES AB E1a_E2a80.00
1531536.60BRDG1'protein_coding'211AELoss-11.266EU ES AB E3a_E5a50.00
1541546.60AC116654.4'IG_V_gene'12DELoss-97.160N/AAC116654.4N/A
1551556.60PCBD2'protein_coding'25AELoss-16.924IR I3_AR110
1561566.59AHR'protein_coding'213AELoss-18.114EU AB IR I11_SR10
1571576.59TIMP1'protein_coding'411DEGain96.114EU ES TIMP133.33
1581586.57COL1A1'protein_coding'151DEGain95.2810EU AB COL1A112.50
1591596.57C1QC'protein_coding'37DEGain94.760N/AC1QCN/A
1601606.52COL6A1'protein_coding'135DEGain91.650N/ACOL6A1N/A
1611616.51ZNF813'protein_coding'26AELoss-13.174CE I1_AR10
1621626.50AHSA2'protein_coding'723AELoss-6.3427EU ES AB IR CE E11_Db12.50
1631636.50TMEM50A'protein_coding'17AELoss-12.921ES E2a_E4a0
1641646.48C1orf103'protein_coding'24AELoss-8.236EU AB E1_Da75.00
1651656.48BCL2'protein_coding'24DEGain36.3911EU AB CE BCL280.00
1661666.48AEBP2'protein_coding'313AELoss-19.4811EU AB CE E1_Da25.00
1671676.47TMEM176A'protein_coding'17DEGain88.440N/ATMEM176AN/A
1681686.45SAMD9'protein_coding'13DEGain35.824EU SAMD9100.00
1691696.45MRPS5'protein_coding'213AEGain17.943EU ES CE I7_AR20.00
1701706.43PLA2G7'protein_coding'112DEGain86.290N/APLA2G7N/A
1711716.43TALDO1'protein_coding'18AELoss-52.883EU ER1a0.00
1721726.43HLA-DOA'protein_coding'28AELoss-11.781ES E3b_E5a0
1731736.41LIPA'protein_coding'418AELoss-3.492EU AB E2_Da0
1741746.41MGST3'protein_coding'717AELoss-6.681EU ER10a0
1751756.41ITGB7'protein_coding'216AEGain16.985EU AB IR I4_AR10
1761766.41LGALS1'protein_coding'14AELoss-10.691CE I1_AR30
1771776.40JUN'protein_coding'11DELoss-84.270N/AJUNN/A
1781786.39NUDT4'protein_coding'15AELoss-11.385EU E3a_E4a75.00
1791796.39ACYP1'protein_coding'24AEGain8.787EU AB IR I3100.00
1801806.39DCN'protein_coding'610DEGain83.884EU ES DCN66.67
1811816.39BIRC3'protein_coding'211AELoss-10.036EU ES E1a_E3a80.00
1821826.37RASSF4'protein_coding'515DEGain82.720N/ARASSF4N/A
1831836.36GOLGA3'protein_coding'124AELoss-47.985EU AB IR CE I1_AR20
1841846.36TAGLN'protein_coding'310DEGain34.054EU AB TAGLN100.00
1851856.35MNDA'protein_coding'17DEGain81.370N/AMNDAN/A
1861866.34FAM126B'protein_coding'112AELoss-14.625EU CE I1_SR40.00
1871876.34SENP7'protein_coding'729AELoss-6.1414EU AB CE I4_AR230.00
1881886.34MS4A7'protein_coding'27AELoss-13.4111EU ES AB IR CE E3a_E4a75.00
1891896.34CCL18'protein_coding'13DEGain80.791EU CCL180
1901906.34USPL1'protein_coding'19AEGain10.307EU ES CE I1_AR266.67
1911916.33IFITM2'protein_coding'27AELoss-14.421EU E1c_E2a0
1921926.32EFEMP1'protein_coding'416DEGain79.980N/AEFEMP1N/A
1931936.32MAP3K12'protein_coding'115AELoss-14.6114EU AB IR I6_AR137.50
1941946.31C1S'protein_coding'634DEGain79.5011EU AB C1S33.33
1951956.31CSF2RA'protein_coding'820AELoss-2.0316EU ES AB E14_Da64.29
1961966.31HNRNPH3'protein_coding'212AELoss-13.286EU ES AB E2a_E5a25.00
1971976.30FUSIP1'protein_coding'615AELoss-13.776EU AB E1_Ad50.00
1981986.29PPP1R15A'protein_coding'13DELoss-78.340N/APPP1R15AN/A
1991996.27FABP4'protein_coding'14DEGain77.340N/AFABP4N/A
2002006.26GCDH'protein_coding'112AELoss-60.653IR I6_AR20
2012016.24KIF18B'protein_coding'219AEGain3.598EU AB IR E14_Da0.00
2022026.24CXCL14'protein_coding'14DEGain31.882EU CXCL14100.00
2032036.23SC-9C5.12'protein_coding'35AEGain3.1915EU ES AB IR E3_Aa50.00
2042046.23COL4A1'protein_coding'467DEGain75.090N/ACOL4A1N/A
2052056.23SERPINE1'protein_coding'19DEGain31.617EU SERPINE116.67
2062066.23PTGDS'protein_coding'310DEGain74.941EU PTGDS0
2072076.22KIAA1586'protein_coding'14AELoss-8.231EU E1a_E2a0
2082086.22LEPROTL1'protein_coding'25AELoss-6.175EU ES CE I1_AR266.67
2092096.21AFF3'protein_coding'429AELoss-10.066EU ES AB CE E1a_E5a50.00
2102106.20AC007599.6'rRNA_pseudogene'11DELoss-73.650N/AAC007599.6N/A
2112116.20PRDM2'protein_coding'922AEGain10.498EU ES AB CE E14_Db0.00
2122126.20EGR4'protein_coding'12DELoss-73.400N/AEGR4N/A
2132136.19AQP1'protein_coding'410DEGain72.990N/AAQP1N/A
2142146.18D87023.1'IG_J_gene'11DELoss-72.390N/AD87023.1N/A
2152156.17MGP'protein_coding'14DEGain72.050N/AMGPN/A
2162166.15SMC6'protein_coding'335AELoss-4.5313EU ES AB IR I5_AR128.57
2172176.15SH3YL1'protein_coding'727AELoss-6.008EU AB CE ER12a50.00
2182186.14STAT4'protein_coding'328AELoss-6.6018EU AB CE E2_Da50.00
2192196.14CST3'protein_coding'38DEGain70.380N/ACST3N/A
2202206.13NCOA4'protein_coding'516AEGain47.613EU ES E2a_E4a0.00
2212216.13BX664615.10'protein_coding'36AEGain10.424EU AB CE E3_Aa0
2222226.13COL4A2'protein_coding'461DEGain69.870N/ACOL4A2N/A
2232236.12MMP2'protein_coding'113DEGain69.720N/AMMP2N/A
2242246.12SERPINF1'protein_coding'18DEGain69.503EU AB SERPINF10
2252256.11ASNS'protein_coding'316AELoss-9.142EU ES E1a_E2b100.00
2262266.11TAF8'protein_coding'414AEGain11.054EU AB CE E10_Da0
2272276.11ENTPD1'protein_coding'414AELoss-7.032EU CE I1_AR10
2282286.11FNBP1'protein_coding'525AELoss-16.939EU ES AB CE E12a_E15b100.00
2292296.10KCNN4'protein_coding'211AELoss-10.163EU ES CE E5a_E7a0.00
2302306.09C14orf24'protein_coding'311AELoss-7.8311EU AB IR E3_Ab83.33
2312316.08RPL3'protein_coding'417AELoss-402.8316EU AB IR ER9b28.57
2322326.08IGLV3-21'IG_V_gene'12DELoss-67.510N/AIGLV3-21N/A
2332336.08GNG10'protein_coding'411AELoss-2.877EU ER1b83.33
2342346.07OR2I1P'unprocessed_pseudogene'11DEGain67.410N/AOR2I1PN/A
2352356.07LY75'protein_coding'443AELoss-4.1118EU ES AB CE I1_SR153.85
2362366.07IGFBP3'protein_coding'310DEGain67.100N/AIGFBP3N/A
2372376.06PDCD7'protein_coding'29AEGain12.619EU AB IR E5_Aa0.00
2382386.06SLCO2B1'protein_coding'214DEGain66.610N/ASLCO2B1N/A
2392396.05IRS1'protein_coding'12AEGain7.822EU ER2a100.00
2402406.04STK17B'protein_coding'210AELoss-13.4910EU AB CE E2_Da33.33
2412416.03C14orf129'protein_coding'14AELoss-6.232AB CE E1_Da0
2422426.03GTF2I'protein_coding'335AELoss-11.811ES E30a_E32a0
2432436.02C9orf86'protein_coding'625AEGain10.363EU AB E1_Ab0
2442446.02GPR34'protein_coding'38DEGain64.730N/AGPR34N/A
2452456.01BNIP2'protein_coding'212AELoss-7.239EU AB CE E1_Da66.67
2462466.01CD1C'protein_coding'26AEGain42.0411EU ES AB IR I4_SR1100.00
2472476.01AB019439.1'IG_V_gene'12DELoss-64.630N/AAB019439.1N/A
2482486.01C18orf1'protein_coding'59AELoss-6.979EU ES AB CE ER5a100.00
2492496.01IL33'protein_coding'17DEGain64.390N/AIL33N/A
2502506.00CCDC80'protein_coding'18DEGain64.130N/ACCDC80N/A
2512516.00CAMK2D'protein_coding'730AELoss-9.2614EU AB IR E1_Da0.00


Candidate Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1115.58BRE'protein_coding'721AELoss-1448.8311EU AB IR I1_AR175.00
2214.56HLA-DRB1'protein_coding'16AELoss-823.353EU E2a_E3a50.00
3314.27HLA-B'protein_coding'521AELoss-579.017EU E3a_E4a33.33
4413.28RPL7'protein_coding'517AELoss-313.0518EU ES AB CE ER7a63.64
5512.84RPL28'protein_coding'15AELoss-1797.624EU AB ER3a0.00
6612.23PTPRG'protein_coding'439AELoss-82.507EU CE I1_AR3866.67
7712.17TOR1AIP1'protein_coding'415AELoss-102.253EU AB E2a_E3a100.00
8812.01HLA-DQA1'protein_coding'411AEGain1846.0210EU AB E4a_E4b57.14
9911.28HLA-DQB1'protein_coding'817AELoss-96.595EU ES AB E6a_E9a33.33
101011.17AL671277.5'protein_coding'112AELoss-38.0822EU AB IR CE E7_Aa75.00
111110.82PCNP'protein_coding'25AELoss-61.917EU AB IR I1_SR150.00
121210.56FNIP1'protein_coding'320AELoss-74.678EU AB CE I15_AR166.67
131310.53HLA-A'protein_coding'723AEGain600.153EU AB E8b_E9a100.00
141410.19WDR68'protein_coding'18AELoss-54.926EU E5a_E6a100.00
15159.80RPL37'protein_coding'28AELoss-1286.849EU ES AB ER2b66.67
16169.73TBC1D4'protein_coding'221AELoss-30.2833EU ES AB CE ER9a88.89
17199.17AC004833.1'pseudogene'13AELoss-36.722AB E2_Da0
18209.17AC004448.3'pseudogene'12AELoss-4.373EU AB E2_Aa0
19238.88RPL23A'protein_coding'39AELoss-161.109EU IR ER4a60.00
20248.74TAOK3'protein_coding'225AELoss-47.7015EU CE I3_AR657.14
21258.72C15orf57'protein_coding'25AELoss-68.922EU ES E1a_E3a100.00
22278.71TMEM66'protein_coding'16AELoss-37.792EU CE I1_AR20
23288.65PRPF18'protein_coding'419AELoss-149.4110EU ES AB E3_Da20.00
24298.53APOE'protein_coding'14DEGain370.693EU APOE50.00
25318.45FOSB'protein_coding'14DELoss-349.733EU AB FOSB0
26338.42TRAPPC10'protein_coding'224AELoss-40.242EU I3_SR10
27348.31RP11-488L18.4'unprocessed_pseudogene'14AELoss-13.582EU E3a_E4a0
28358.28HLA-DRB5'protein_coding'27AELoss-245.273EU ER7a0.00
29388.19HLA-J'protein_coding'412AELoss-19.599EU AB E1_Da66.67
30398.17HIST1H2AC'protein_coding'35AELoss-18.272EU AB E3_Aa0
31418.12AP1G2'protein_coding'223AELoss-41.1815ES AB IR CE E18a_E20a0.00
32428.12ADAM10'protein_coding'426AELoss-20.829EU ES AB CE I4_AR150.00
33458.08SMARCA5'protein_coding'124AELoss-13.835EU ES E13a_E15a50.00
34468.06FAM172A'protein_coding'213AELoss-17.8911EU CE I10_AR210.00
35478.00SPARC'protein_coding'110DEGain256.023EU SPARC50.00
36497.97AC091982.3'pseudogene'12AELoss-23.051AB E2_Aa0
37517.96ESNA1'protein_coding'522AELoss-19.9211EU ES AB CE I12_AR175.00
38527.94CWC15'protein_coding'18AELoss-23.473EU AB E6a_E7a0.00
39537.91GAB1'protein_coding'212AELoss-24.012EU CE I3_AR40
40567.87RNGTT'protein_coding'318AELoss-12.3515EU AB CE E1a_E2a41.67
41577.86FER'protein_coding'120AELoss-30.865EU CE I2_AR20.00
42587.81TMEM119'protein_coding'25AELoss-2.343AB E2_Ab0
43597.80CCDC152'protein_coding'19DEGain75.514EU CCDC152100.00
44607.78IL18'protein_coding'16DEGain74.845EU IL1875.00
45617.77AC010468.5'pseudogene'12AELoss-28.501EU E1a_E2a0
46627.76SNX6'protein_coding'420AELoss-10.1314EU CE I11_SR290.91
47647.73H3F3A'protein_coding'411AELoss-21.6111EU AB IR E2_Da40.00
48677.68C1orf71'protein_coding'315AELoss-22.552EU CE I2_AR10
49687.64IGHV4-31'IG_C_gene'27AEGain3.582EU E4a_E5a0.00
50697.63NLRC3'protein_coding'325AELoss-26.171EU E10a_E11a0
51707.60FAM152A'protein_coding'512AELoss-17.394EU IR I1100.00
52717.60SCP2'protein_coding'521AELoss-16.125EU CE I12_AR150.00
53737.54AC022210.8'pseudogene'13AEGain30.273EU ES AB E1_Da100.00
54747.53SLC37A1'protein_coding'323AELoss-32.4820ES AB IR CE E6_Da0
55757.51PLA2G2D'protein_coding'14DEGain181.873EU PLA2G2D50.00
56797.44RP5-1022P6.2'protein_coding'220AELoss-12.8010EU CE I2_AR175.00
57807.41MGEA5'protein_coding'318AELoss-20.403EU CE I9_AR10
58827.35MED12L'protein_coding'245AEGain20.8612EU ES AB CE I15_AR125.00
59837.34TCTN1'protein_coding'827AELoss-3.0818EU ES AB CE E3_Aa53.85
60847.33MOBKL3'protein_coding'616AELoss-21.2916EU ES AB E2a_E5a72.73
61867.32LYZ'protein_coding'14DEGain159.342EU LYZ100.00
62927.23MMP9'protein_coding'113DEGain149.686EU MMP980.00
63937.16RPL9'protein_coding'18AEGain3.3310EU AB IR E6a_E7a40.00
64947.16IGHG4'IG_C_gene'29AELoss-5.039EU AB E1_Da66.67
65957.15FCER1G'protein_coding'27AELoss-2.066EU AB E6_Aa50.00
66967.14SAPS1'protein_coding'124AELoss-114.021EU E17a_E18a0
67977.11PSMA8'protein_coding'29AELoss-6.404EU CE I4_AR1100.00
68987.10RPA3'protein_coding'517AEGain14.0712EU AB CE ENST0000040277183.33
69997.09HNRPDL'protein_coding'210AEGain57.018EU AB IR E8_Aa33.33
701007.08UCHL5'protein_coding'927AELoss-11.6323EU AB IR CE ER2d78.57
711027.07LMO4'protein_coding'38AEGain59.294EU ES AB E6_Db0.00
721047.06PHIP'protein_coding'242AELoss-20.8814EU AB CE I4_SR150.00
731057.06IGHE'IG_C_gene'211DEGain133.053EU AB CE IGHE0
741067.05ANP32E'protein_coding'514AELoss-10.976EU AB ER1a75.00
751077.05HLA-DQB2'protein_coding'49AEGain3.915EU ER5a50.00
761087.04FAM3C'protein_coding'110AELoss-14.595EU E6a_E7a0.00
771097.01AC026250.16'protein_coding'112AELoss-12.577EU ES AB E9_Da100.00
781117.00ADD1'protein_coding'624AELoss-14.957EU ER18a66.67
791126.99CREB5'protein_coding'616AELoss-14.799EU ES AB CE I1_AR340.00
801136.99C8orf76'protein_coding'29AELoss-15.031I4_SR10
811146.99GOLT1B'protein_coding'15AELoss-7.991ES E2a_E4a0
821156.99TM9SF3'protein_coding'115AELoss-10.758EU CE I4_AR166.67
831166.97C7orf10'protein_coding'319AELoss-102.121CE I15_AR100
841176.97ARG2'protein_coding'18AEGain6.0922EU AB IR I691.67
851186.96CREBZF'protein_coding'25AEGain39.303EU AB ER2b100.00
861196.95PI4KA'protein_coding'258AEGain18.523EU AB E51a_E52a0.00
871206.94FOXN3'protein_coding'27AELoss-12.533EU AB E2_Da100.00
881236.92TMEM176B'protein_coding'29DEGain121.283EU TMEM176B0.00
891246.92CEP57'protein_coding'211AELoss-12.166EU ES E6a_E9a0.00
901266.88NR4A1'protein_coding'615DELoss-117.577EU ES AB NR4A10.00
911276.86RHBDD1'protein_coding'311AELoss-15.823AB CE E1_Da0
921286.86SMC4'protein_coding'429AELoss-13.4027EU ES AB IR ER2b80.95
931306.83TTC3'protein_coding'451AELoss-10.6829EU ES E45a_E47a64.29
941316.82MAG'protein_coding'314AEGain42.115EU E10a_E11a75.00
951326.82ERBB2IP'protein_coding'628AELoss-17.6925EU ES CE E22a_E23a69.57
961346.79ATAD2B'protein_coding'231AELoss-12.6412EU AB CE I1_AR133.33
971366.77C9orf41'protein_coding'311AELoss-6.487EU AB CE E1_Ab75.00
981376.77CDK6'protein_coding'18AELoss-10.957EU AB IR CE I2_AR10.00
991406.74RB1'protein_coding'127AELoss-12.5914EU CE I1_AR670.00
1001416.72PLEKHK1'protein_coding'417AELoss-17.898EU AB ER1a40.00
1011426.72KIAA0430'protein_coding'332AELoss-12.292ES E24a_E27a0.00
1021436.72TGFBR2'protein_coding'311AELoss-11.971CE I1_AR20
1031446.70PIN4'protein_coding'37AEGain21.422EU ES E1a_E3a0.00
1041456.70TMEM167A'protein_coding'14AELoss-10.891I1_SR20
1051466.68ANKRD46'protein_coding'39AELoss-6.737EU AB CE E1_Da66.67
1061476.66TMED5'protein_coding'37AELoss-6.594EU CE I1_AR10.00
1071506.63HSD17B4'protein_coding'124AELoss-6.805EU CE I2_AR466.67
1081516.63KIAA1033'protein_coding'234AELoss-8.2010EU ES E24a_E25a44.44
1091526.62CCDC90B'protein_coding'19AELoss-4.5312EU ES AB E1a_E2a80.00
1101536.60BRDG1'protein_coding'211AELoss-11.266EU ES AB E3a_E5a50.00
1111556.60PCBD2'protein_coding'25AELoss-16.924IR I3_AR110
1121566.59AHR'protein_coding'213AELoss-18.114EU AB IR I11_SR10
1131576.59TIMP1'protein_coding'411DEGain96.114EU ES TIMP133.33
1141586.57COL1A1'protein_coding'151DEGain95.2810EU AB COL1A112.50
1151616.51ZNF813'protein_coding'26AELoss-13.174CE I1_AR10
1161626.50AHSA2'protein_coding'723AELoss-6.3427EU ES AB IR CE E11_Db12.50
1171636.50TMEM50A'protein_coding'17AELoss-12.921ES E2a_E4a0
1181646.48C1orf103'protein_coding'24AELoss-8.236EU AB E1_Da75.00
1191656.48BCL2'protein_coding'24DEGain36.3911EU AB CE BCL280.00
1201666.48AEBP2'protein_coding'313AELoss-19.4811EU AB CE E1_Da25.00
1211686.45SAMD9'protein_coding'13DEGain35.824EU SAMD9100.00
1221696.45MRPS5'protein_coding'213AEGain17.943EU ES CE I7_AR20.00
1231716.43TALDO1'protein_coding'18AELoss-52.883EU ER1a0.00
1241726.43HLA-DOA'protein_coding'28AELoss-11.781ES E3b_E5a0
1251736.41LIPA'protein_coding'418AELoss-3.492EU AB E2_Da0
1261746.41MGST3'protein_coding'717AELoss-6.681EU ER10a0
1271756.41ITGB7'protein_coding'216AEGain16.985EU AB IR I4_AR10
1281766.41LGALS1'protein_coding'14AELoss-10.691CE I1_AR30
1291786.39NUDT4'protein_coding'15AELoss-11.385EU E3a_E4a75.00
1301796.39ACYP1'protein_coding'24AEGain8.787EU AB IR I3100.00
1311806.39DCN'protein_coding'610DEGain83.884EU ES DCN66.67
1321816.39BIRC3'protein_coding'211AELoss-10.036EU ES E1a_E3a80.00
1331836.36GOLGA3'protein_coding'124AELoss-47.985EU AB IR CE I1_AR20
1341846.36TAGLN'protein_coding'310DEGain34.054EU AB TAGLN100.00
1351866.34FAM126B'protein_coding'112AELoss-14.625EU CE I1_SR40.00
1361876.34SENP7'protein_coding'729AELoss-6.1414EU AB CE I4_AR230.00
1371886.34MS4A7'protein_coding'27AELoss-13.4111EU ES AB IR CE E3a_E4a75.00
1381896.34CCL18'protein_coding'13DEGain80.791EU CCL180
1391906.34USPL1'protein_coding'19AEGain10.307EU ES CE I1_AR266.67
1401916.33IFITM2'protein_coding'27AELoss-14.421EU E1c_E2a0
1411936.32MAP3K12'protein_coding'115AELoss-14.6114EU AB IR I6_AR137.50
1421946.31C1S'protein_coding'634DEGain79.5011EU AB C1S33.33
1431956.31CSF2RA'protein_coding'820AELoss-2.0316EU ES AB E14_Da64.29
1441966.31HNRNPH3'protein_coding'212AELoss-13.286EU ES AB E2a_E5a25.00
1451976.30FUSIP1'protein_coding'615AELoss-13.776EU AB E1_Ad50.00
1462006.26GCDH'protein_coding'112AELoss-60.653IR I6_AR20
1472016.24KIF18B'protein_coding'219AEGain3.598EU AB IR E14_Da0.00
1482026.24CXCL14'protein_coding'14DEGain31.882EU CXCL14100.00
1492036.23SC-9C5.12'protein_coding'35AEGain3.1915EU ES AB IR E3_Aa50.00
1502056.23SERPINE1'protein_coding'19DEGain31.617EU SERPINE116.67
1512066.23PTGDS'protein_coding'310DEGain74.941EU PTGDS0
1522076.22KIAA1586'protein_coding'14AELoss-8.231EU E1a_E2a0
1532086.22LEPROTL1'protein_coding'25AELoss-6.175EU ES CE I1_AR266.67
1542096.21AFF3'protein_coding'429AELoss-10.066EU ES AB CE E1a_E5a50.00
1552116.20PRDM2'protein_coding'922AEGain10.498EU ES AB CE E14_Db0.00
1562166.15SMC6'protein_coding'335AELoss-4.5313EU ES AB IR I5_AR128.57
1572176.15SH3YL1'protein_coding'727AELoss-6.008EU AB CE ER12a50.00
1582186.14STAT4'protein_coding'328AELoss-6.6018EU AB CE E2_Da50.00
1592206.13NCOA4'protein_coding'516AEGain47.613EU ES E2a_E4a0.00
1602216.13BX664615.10'protein_coding'36AEGain10.424EU AB CE E3_Aa0
1612246.12SERPINF1'protein_coding'18DEGain69.503EU AB SERPINF10
1622256.11ASNS'protein_coding'316AELoss-9.142EU ES E1a_E2b100.00
1632266.11TAF8'protein_coding'414AEGain11.054EU AB CE E10_Da0
1642276.11ENTPD1'protein_coding'414AELoss-7.032EU CE I1_AR10
1652286.11FNBP1'protein_coding'525AELoss-16.939EU ES AB CE E12a_E15b100.00
1662296.10KCNN4'protein_coding'211AELoss-10.163EU ES CE E5a_E7a0.00
1672306.09C14orf24'protein_coding'311AELoss-7.8311EU AB IR E3_Ab83.33
1682316.08RPL3'protein_coding'417AELoss-402.8316EU AB IR ER9b28.57
1692336.08GNG10'protein_coding'411AELoss-2.877EU ER1b83.33
1702356.07LY75'protein_coding'443AELoss-4.1118EU ES AB CE I1_SR153.85
1712376.06PDCD7'protein_coding'29AEGain12.619EU AB IR E5_Aa0.00
1722396.05IRS1'protein_coding'12AEGain7.822EU ER2a100.00
1732406.04STK17B'protein_coding'210AELoss-13.4910EU AB CE E2_Da33.33
1742416.03C14orf129'protein_coding'14AELoss-6.232AB CE E1_Da0
1752426.03GTF2I'protein_coding'335AELoss-11.811ES E30a_E32a0
1762436.02C9orf86'protein_coding'625AEGain10.363EU AB E1_Ab0
1772456.01BNIP2'protein_coding'212AELoss-7.239EU AB CE E1_Da66.67
1782466.01CD1C'protein_coding'26AEGain42.0411EU ES AB IR I4_SR1100.00
1792486.01C18orf1'protein_coding'59AELoss-6.979EU ES AB CE ER5a100.00
1802516.00CAMK2D'protein_coding'730AELoss-9.2614EU AB IR E1_Da0.00
1812535.99PARP2'protein_coding'116AEGain12.237EU ES AB CE E2a_E3a33.33
1822545.99CEBPZ'protein_coding'116AEGain36.3911EU AB E14_Aa100.00
1832565.96ACOT7'protein_coding'615AEGain4.782EU CE I3_AR10
1842575.96SLCO3A1'protein_coding'110AEGain4.442EU AB E9_Da0
1852615.94ZNF682'protein_coding'37AELoss-9.584EU AB CE E3a_E4a0.00
1862625.94ERO1LB'protein_coding'320AELoss-12.327EU ES E1a_E3a50.00
1872635.93TIAL1'protein_coding'419AEGain43.2613EU AB IR E10_Da0.00
1882645.93EHMT1'protein_coding'534AELoss-74.905EU ES CE I6_AR10.00
1892655.92PTER'protein_coding'39AELoss-6.992EU I1_SR20
1902665.91DOPEY2'protein_coding'238AELoss-11.8112EU I2_SR350.00
1912675.91RRP1'protein_coding'216AEGain9.6512EU AB IR CE E4_Da0
1922685.91COX11'protein_coding'27AEGain12.806EU AB E4_Da66.67
1932695.90KIAA0528'protein_coding'228AELoss-6.686EU E7a_E8a40.00
1942705.90C1orf54'protein_coding'310AEGain109.488EU ER3b71.43
1952715.90DTWD2'protein_coding'16AELoss-10.442EU CE I1_AR10
1962725.89PJA2'protein_coding'212AELoss-6.085EU CE I1_AR266.67
1972735.89ZMYM2'protein_coding'643AELoss-5.4414EU ES AB E1_Db40.00
1982765.88MEMO1'protein_coding'415AELoss-7.266EU AB E2_Ac75.00
1992785.86BUB3'protein_coding'414AELoss-8.4313EU AB E1a_E2a88.89
2002795.86AC093520.4'protein_coding'12AEGain26.022IR CE Ix0
2012815.85TMC8'protein_coding'217AELoss-9.142ES E9a_E12a100.00
2022835.84HIST1H2BD'protein_coding'23AELoss-10.583EU AB E1_Da0.00
2032855.84CD47'protein_coding'519AELoss-4.1313EU AB CE I1_SR157.14
2042865.83MBNL2'protein_coding'717AELoss-17.3719EU ES AB E6c_E7a88.24
2052885.83SMC5'protein_coding'125AELoss-11.8516EU ES CE I1_AR271.43
2062895.82AB019439.1'IG_V_gene'12DELoss-56.611EU AB019439.10
2072905.82ZCCHC10'protein_coding'25AELoss-9.562EU ES E3a_E5a0.00
2082915.82TYROBP'protein_coding'15DEGain56.361EU TYROBP0
2092925.82SAR1A'protein_coding'619AELoss-11.635EU ES E1a_E4b50.00
2102935.81WDR43'protein_coding'221AELoss-11.421I1_SR10
2112955.81BZW1'protein_coding'523AELoss-10.594EU ES AB E1a_E5a0.00
2122965.80ZNF322A'protein_coding'14AELoss-3.132EU E1a_E2a0.00
2132995.80AGPAT5'protein_coding'18AELoss-5.532EU AB E1_Da0
2143015.79KIF5B'protein_coding'228AEGain23.5311EU E4a_E5a90.00
2153025.79ZNF808'protein_coding'14AELoss-10.671CE I1_AR40
2163065.77PGAM1'protein_coding'14AELoss-27.743EU E1a_E2a0.00
2173095.76ATXN10'protein_coding'425AEGain9.508EU AB E15_Da80.00
2183115.75ZNF431'protein_coding'15AELoss-9.511AB E2_Da0
2193125.75DIP'protein_coding'323AEGain13.112EU AB ER19b0
2203135.75AC140077.17'protein_coding'110DEGain53.671EU AC140077.170
2213165.73ZNF44'protein_coding'419AELoss-6.707EU AB IR CE I12_SR2100.00
2223175.73GRAMD1C'protein_coding'118DEGain23.948EU ES GRAMD1C28.57
2233185.72ECT2'protein_coding'225AEGain10.579EU CE I24_AR560.00
2243215.71SERP2'protein_coding'35AEGain7.481EU ER4a0
2253225.71SNHG12'protein_coding'29AEGain8.815EU ES AB IR E5_Aa0.00
2263235.70ZDHHC14'protein_coding'210AELoss-8.931I1_SR180
2273245.70PTMA'protein_coding'725AEGain8.868EU ES AB ENST0000040911550.00
2283255.70CDC42'protein_coding'411AELoss-8.594EU ES E7a_E8a33.33
2293275.69TPP2'protein_coding'433AELoss-8.8818EU ES AB E2a_E3a57.14
2303285.69ZNF141'protein_coding'14AELoss-10.814EU AB I3_SR10
2313295.69ALCAM'protein_coding'316AELoss-6.363EU I1_SR2100.00
2323305.68FOLR2'protein_coding'212AEGain107.6716EU AB ER4b66.67
2333325.67SUPT16H'protein_coding'126AELoss-11.435EU CE I1_AR133.33
2343335.67HNRPA2B1'protein_coding'519AEGain25.2413EU ES AB IR E12_Da57.14
2353355.67ICAM2'protein_coding'15AEGain26.552AB CE E2_Aa0
2363365.67TADA2L'protein_coding'321AELoss-34.563EU CE I11_AR6100.00
2373375.66RP11-764K9.4'unprocessed_pseudogene'19AEGain9.128AB IR CE I8_SR10
2383385.66AIDA'protein_coding'212AELoss-5.155EU AB E1_Ab0.00
2393395.66ARIH1'protein_coding'216AELoss-23.044EU AB E1_Ab100.00
2403405.66ZNRD1'protein_coding'49AELoss-10.001ES E1d_E3a0
2413415.66CENPO'protein_coding'311AEGain7.197EU ES AB E8_Aa100.00
2423425.65SPG7'protein_coding'434AELoss-10.431I9_SR10
2433435.65ZNF493'protein_coding'47AELoss-2.293EU AB E4_Da0.00
2443445.65NT5C2'protein_coding'521AEGain11.597EU ES AB E20_Da40.00
2453465.64QRSL1'protein_coding'213AELoss-9.725EU ES CE I1_AR10.00
2463485.64AAAS'protein_coding'217AEGain8.503AB IR I10
2473495.63FKBP1A'protein_coding'512AEGain16.862EU ENST00000381719100.00
2483505.63RRM2B'protein_coding'413AELoss-10.745EU AB CE I1_AR10.00
2493515.62BX537114.2'protein_coding'14AEGain9.001ES E1a_E3a0
2503525.62ANUBL1'protein_coding'719AEGain12.3214EU ES AB IR CE E14_Aa20.00
2513535.61IGHM'IG_C_gene'26DELoss-48.874EU AB IGHM50.00


Candidate Differential and Alternative Expression Genes (Gain ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1812.01HLA-DQA1'protein_coding'411AEGain1846.0210EU AB E4a_E4b57.14
21310.53HLA-A'protein_coding'723AEGain600.153EU AB E8b_E9a100.00
3179.62SEPP1'protein_coding'14DEGain789.430N/ASEPP1N/A
4189.27CXCL9'protein_coding'14DEGain616.360N/ACXCL9N/A
5219.00CCL19'protein_coding'26DEGain510.930N/ACCL19N/A
6268.72LUM'protein_coding'13DEGain422.500N/ALUMN/A
7298.53APOE'protein_coding'14DEGain370.693EU APOE50.00
8308.53CCL21'protein_coding'26DEGain370.400N/ACCL21N/A
9378.22BGN'protein_coding'211DEGain298.590N/ABGNN/A
10478.00SPARC'protein_coding'110DEGain256.023EU SPARC50.00
11487.97IGFBP7'protein_coding'15DEGain250.950N/AIGFBP7N/A
12507.97SLC40A1'protein_coding'18DEGain250.130N/ASLC40A1N/A
13557.89C3'protein_coding'141DEGain236.730N/AC3N/A
14597.80CCDC152'protein_coding'19DEGain75.514EU CCDC152100.00
15607.78IL18'protein_coding'16DEGain74.845EU IL1875.00
16637.75ENPP2'protein_coding'226DEGain214.600N/AENPP2N/A
17657.73COL3A1'protein_coding'254DEGain212.690N/ACOL3A1N/A
18667.69COL1A2'protein_coding'254DEGain206.770N/ACOL1A2N/A
19687.64IGHV4-31'IG_C_gene'27AEGain3.582EU E4a_E5a0.00
20727.58FN1'protein_coding'1050DEGain191.690N/AFN1N/A
21737.54AC022210.8'pseudogene'13AEGain30.273EU ES AB E1_Da100.00
22757.51PLA2G2D'protein_coding'14DEGain181.873EU PLA2G2D50.00
23767.49A2M'protein_coding'240DEGain180.130N/AA2MN/A
24777.48APOC1'protein_coding'15DEGain178.990N/AAPOC1N/A
25787.46TIMP3'protein_coding'28DEGain176.190N/ATIMP3N/A
26817.37C1QB'protein_coding'13DEGain165.680N/AC1QBN/A
27827.35MED12L'protein_coding'245AEGain20.8612EU ES AB CE I15_AR125.00
28857.32SERPING1'protein_coding'617DEGain159.900N/ASERPING1N/A
29867.32LYZ'protein_coding'14DEGain159.342EU LYZ100.00
30877.30CCL2'protein_coding'13DEGain158.020N/ACCL2N/A
31917.23POSTN'protein_coding'524DEGain150.570N/APOSTNN/A
32927.23MMP9'protein_coding'113DEGain149.686EU MMP980.00
33937.16RPL9'protein_coding'18AEGain3.3310EU AB IR E6a_E7a40.00
34987.10RPA3'protein_coding'517AEGain14.0712EU AB CE ENST0000040277183.33
35997.09HNRPDL'protein_coding'210AEGain57.018EU AB IR E8_Aa33.33
361017.08FSTL1'protein_coding'111DEGain135.530N/AFSTL1N/A
371027.07LMO4'protein_coding'38AEGain59.294EU ES AB E6_Db0.00
381037.07SPARCL1'protein_coding'111DEGain134.300N/ASPARCL1N/A
391057.06IGHE'IG_C_gene'211DEGain133.053EU AB CE IGHE0
401077.05HLA-DQB2'protein_coding'49AEGain3.915EU ER5a50.00
411107.01RARRES1'protein_coding'16DEGain128.910N/ARARRES1N/A
421176.97ARG2'protein_coding'18AEGain6.0922EU AB IR I691.67
431186.96CREBZF'protein_coding'25AEGain39.303EU AB ER2b100.00
441196.95PI4KA'protein_coding'258AEGain18.523EU AB E51a_E52a0.00
451216.93ADAMDEC1'protein_coding'215DEGain122.300N/AADAMDEC1N/A
461226.93MS4A6A'protein_coding'17DEGain122.050N/AMS4A6AN/A
471236.92TMEM176B'protein_coding'29DEGain121.283EU TMEM176B0.00
481256.91C1QA'protein_coding'311DEGain120.180N/AC1QAN/A
491296.84GPNMB'protein_coding'314DEGain114.900N/AGPNMBN/A
501316.82MAG'protein_coding'314AEGain42.115EU E10a_E11a75.00
511356.78CTSL1'protein_coding'414DEGain109.540N/ACTSL1N/A
521396.75THY1'protein_coding'14DEGain107.420N/ATHY1N/A
531446.70PIN4'protein_coding'37AEGain21.422EU ES E1a_E3a0.00
541486.66CSF1R'protein_coding'224DEGain101.370N/ACSF1RN/A
551496.63BTNL9'protein_coding'420DEGain99.220N/ABTNL9N/A
561576.59TIMP1'protein_coding'411DEGain96.114EU ES TIMP133.33
571586.57COL1A1'protein_coding'151DEGain95.2810EU AB COL1A112.50
581596.57C1QC'protein_coding'37DEGain94.760N/AC1QCN/A
591606.52COL6A1'protein_coding'135DEGain91.650N/ACOL6A1N/A
601656.48BCL2'protein_coding'24DEGain36.3911EU AB CE BCL280.00
611676.47TMEM176A'protein_coding'17DEGain88.440N/ATMEM176AN/A
621686.45SAMD9'protein_coding'13DEGain35.824EU SAMD9100.00
631696.45MRPS5'protein_coding'213AEGain17.943EU ES CE I7_AR20.00
641706.43PLA2G7'protein_coding'112DEGain86.290N/APLA2G7N/A
651756.41ITGB7'protein_coding'216AEGain16.985EU AB IR I4_AR10
661796.39ACYP1'protein_coding'24AEGain8.787EU AB IR I3100.00
671806.39DCN'protein_coding'610DEGain83.884EU ES DCN66.67
681826.37RASSF4'protein_coding'515DEGain82.720N/ARASSF4N/A
691846.36TAGLN'protein_coding'310DEGain34.054EU AB TAGLN100.00
701856.35MNDA'protein_coding'17DEGain81.370N/AMNDAN/A
711896.34CCL18'protein_coding'13DEGain80.791EU CCL180
721906.34USPL1'protein_coding'19AEGain10.307EU ES CE I1_AR266.67
731926.32EFEMP1'protein_coding'416DEGain79.980N/AEFEMP1N/A
741946.31C1S'protein_coding'634DEGain79.5011EU AB C1S33.33
751996.27FABP4'protein_coding'14DEGain77.340N/AFABP4N/A
762016.24KIF18B'protein_coding'219AEGain3.598EU AB IR E14_Da0.00
772026.24CXCL14'protein_coding'14DEGain31.882EU CXCL14100.00
782036.23SC-9C5.12'protein_coding'35AEGain3.1915EU ES AB IR E3_Aa50.00
792046.23COL4A1'protein_coding'467DEGain75.090N/ACOL4A1N/A
802056.23SERPINE1'protein_coding'19DEGain31.617EU SERPINE116.67
812066.23PTGDS'protein_coding'310DEGain74.941EU PTGDS0
822116.20PRDM2'protein_coding'922AEGain10.498EU ES AB CE E14_Db0.00
832136.19AQP1'protein_coding'410DEGain72.990N/AAQP1N/A
842156.17MGP'protein_coding'14DEGain72.050N/AMGPN/A
852196.14CST3'protein_coding'38DEGain70.380N/ACST3N/A
862206.13NCOA4'protein_coding'516AEGain47.613EU ES E2a_E4a0.00
872216.13BX664615.10'protein_coding'36AEGain10.424EU AB CE E3_Aa0
882226.13COL4A2'protein_coding'461DEGain69.870N/ACOL4A2N/A
892236.12MMP2'protein_coding'113DEGain69.720N/AMMP2N/A
902246.12SERPINF1'protein_coding'18DEGain69.503EU AB SERPINF10
912266.11TAF8'protein_coding'414AEGain11.054EU AB CE E10_Da0
922346.07OR2I1P'unprocessed_pseudogene'11DEGain67.410N/AOR2I1PN/A
932366.07IGFBP3'protein_coding'310DEGain67.100N/AIGFBP3N/A
942376.06PDCD7'protein_coding'29AEGain12.619EU AB IR E5_Aa0.00
952386.06SLCO2B1'protein_coding'214DEGain66.610N/ASLCO2B1N/A
962396.05IRS1'protein_coding'12AEGain7.822EU ER2a100.00
972436.02C9orf86'protein_coding'625AEGain10.363EU AB E1_Ab0
982446.02GPR34'protein_coding'38DEGain64.730N/AGPR34N/A
992466.01CD1C'protein_coding'26AEGain42.0411EU ES AB IR I4_SR1100.00
1002496.01IL33'protein_coding'17DEGain64.390N/AIL33N/A
1012506.00CCDC80'protein_coding'18DEGain64.130N/ACCDC80N/A
1022525.99COL6A2'protein_coding'533DEGain63.730N/ACOL6A2N/A
1032535.99PARP2'protein_coding'116AEGain12.237EU ES AB CE E2a_E3a33.33
1042545.99CEBPZ'protein_coding'116AEGain36.3911EU AB E14_Aa100.00
1052565.96ACOT7'protein_coding'615AEGain4.782EU CE I3_AR10
1062575.96SLCO3A1'protein_coding'110AEGain4.442EU AB E9_Da0
1072585.96CD14'protein_coding'24DEGain62.100N/ACD14N/A
1082595.95MFAP4'protein_coding'28DEGain61.740N/AMFAP4N/A
1092605.94NNMT'protein_coding'13DEGain61.460N/ANNMTN/A
1102635.93TIAL1'protein_coding'419AEGain43.2613EU AB IR E10_Da0.00
1112675.91RRP1'protein_coding'216AEGain9.6512EU AB IR CE E4_Da0
1122685.91COX11'protein_coding'27AEGain12.806EU AB E4_Da66.67
1132705.90C1orf54'protein_coding'310AEGain109.488EU ER3b71.43
1142775.87DAB2'protein_coding'215DEGain58.550N/ADAB2N/A
1152795.86AC093520.4'protein_coding'12AEGain26.022IR CE Ix0
1162805.85C7'protein_coding'118DEGain57.830N/AC7N/A
1172825.84ABI3BP'protein_coding'567DEGain57.460N/AABI3BPN/A
1182875.83CYP27A1'protein_coding'19DEGain56.860N/ACYP27A1N/A
1192915.82TYROBP'protein_coding'15DEGain56.361EU TYROBP0
1202945.81SAMD9L'protein_coding'27DEGain56.030N/ASAMD9LN/A
1212975.80KLRK1'protein_coding'318DEGain55.890N/AKLRK1N/A
1223015.79KIF5B'protein_coding'228AEGain23.5311EU E4a_E5a90.00
1233035.78TNC'protein_coding'528DEGain54.780N/ATNCN/A
1243045.78TCN2'protein_coding'314DEGain54.770N/ATCN2N/A
1253075.76SFRP4'protein_coding'16DEGain54.260N/ASFRP4N/A
1263095.76ATXN10'protein_coding'425AEGain9.508EU AB E15_Da80.00
1273105.75VCAM1'protein_coding'414DEGain53.880N/AVCAM1N/A
1283125.75DIP'protein_coding'323AEGain13.112EU AB ER19b0
1293135.75AC140077.17'protein_coding'110DEGain53.671EU AC140077.170
1303145.74SLAMF8'protein_coding'25DEGain53.400N/ASLAMF8N/A
1313155.74CALD1'protein_coding'417DEGain53.400N/ACALD1N/A
1323175.73GRAMD1C'protein_coding'118DEGain23.948EU ES GRAMD1C28.57
1333185.72ECT2'protein_coding'225AEGain10.579EU CE I24_AR560.00
1343215.71SERP2'protein_coding'35AEGain7.481EU ER4a0
1353225.71SNHG12'protein_coding'29AEGain8.815EU ES AB IR E5_Aa0.00
1363245.70PTMA'protein_coding'725AEGain8.868EU ES AB ENST0000040911550.00
1373305.68FOLR2'protein_coding'212AEGain107.6716EU AB ER4b66.67
1383315.68CTHRC1'protein_coding'27DEGain51.200N/ACTHRC1N/A
1393335.67HNRPA2B1'protein_coding'519AEGain25.2413EU ES AB IR E12_Da57.14
1403345.67C2'protein_coding'621DEGain50.890N/AC2N/A
1413355.67ICAM2'protein_coding'15AEGain26.552AB CE E2_Aa0
1423375.66RP11-764K9.4'unprocessed_pseudogene'19AEGain9.128AB IR CE I8_SR10
1433415.66CENPO'protein_coding'311AEGain7.197EU ES AB E8_Aa100.00
1443445.65NT5C2'protein_coding'521AEGain11.597EU ES AB E20_Da40.00
1453475.64DNAJC5B'protein_coding'16DEGain49.840N/ADNAJC5BN/A
1463485.64AAAS'protein_coding'217AEGain8.503AB IR I10
1473495.63FKBP1A'protein_coding'512AEGain16.862EU ENST00000381719100.00
1483515.62BX537114.2'protein_coding'14AEGain9.001ES E1a_E3a0
1493525.62ANUBL1'protein_coding'719AEGain12.3214EU ES AB IR CE E14_Aa20.00
1503545.61LSM8'protein_coding'14AEGain10.722CE I3_AR40
1513555.60CFH'protein_coding'425DEGain48.640N/ACFHN/A
1523615.59GPATCH2'protein_coding'211AEGain11.454EU AB E9_Aa50.00
1533625.59KIF15'protein_coding'236AEGain11.169EU ES AB E24_Aa42.86
1543635.58CLIC2'protein_coding'27DEGain47.980N/ACLIC2N/A
1553645.58TIMD4'protein_coding'313DEGain47.960N/ATIMD4N/A
1563685.58CYBRD1'protein_coding'36DEGain47.820N/ACYBRD1N/A
1573765.55FPR3'protein_coding'12DEGain46.910N/AFPR3N/A
1583775.55TGOLN2'protein_coding'715AEGain29.634EU AB ER4b100.00
1593785.55GZMA'protein_coding'15DEGain46.740N/AGZMAN/A
1603795.54GNG5'protein_coding'26AEGain7.003EU AB ENST00000370641100.00
1613805.54C17orf85'protein_coding'214AEGain11.225EU AB IR E7_Da0.00
1623835.54TCTN2'protein_coding'118AEGain7.516EU E9a_E10a80.00
1633845.54TSC22D1'protein_coding'25AEGain9.271I1_SR110
1643855.54CYFIP1'protein_coding'131DEGain46.420N/ACYFIP1N/A
1653865.54SNX22'protein_coding'28AEGain9.053ES AB CE I4_AR10
1663885.52IGFBP5'protein_coding'14DEGain45.770N/AIGFBP5N/A
1673895.51SOD3'protein_coding'12DEGain45.550N/ASOD3N/A
1683915.51CMKLR1'protein_coding'26DEGain45.460N/ACMKLR1N/A
1693955.50EIF2C3'protein_coding'625AEGain7.6610EU ES AB CE E13_Aa100.00
1703965.50TMEM77'protein_coding'211AEGain231.323EU E1a_E2a50.00
1713985.48R3HDM1'protein_coding'532AEGain20.6518EU ES ER9a88.24
1723995.48YTHDC1'protein_coding'217AEGain8.634EU AB CE E12_Aa100.00
1734025.47ANTXR1'protein_coding'628DEGain44.300N/AANTXR1N/A
1744035.47TNFRSF6B'protein_coding'1049AEGain7.8921EU AB IR E36_Da43.75
1754055.46IFITM3'protein_coding'27DEGain20.705EU AB IFITM3100.00
1764085.46UHRF1'protein_coding'219AEGain3.483EU AB E2_Ab0.00
1774105.46COQ10A'protein_coding'26AEGain10.925EU AB IR E5_Aa0
1784115.45TNFSF13B'protein_coding'16DEGain43.720N/ATNFSF13BN/A
1794155.44ZNF326'protein_coding'519AEGain8.6420EU AB IR I5_SR173.33
1804165.44PCGF1'protein_coding'210AEGain7.661AB E2_Aa0
1814175.44DPT'protein_coding'14DEGain43.320N/ADPTN/A
1824195.43XYLT1'protein_coding'112AEGain9.959AB IR E9_Aa0
1834225.42CXCL12'protein_coding'610DEGain42.940N/ACXCL12N/A
1844245.42COPS5'protein_coding'18AEGain26.353EU CE I7_AR10.00
1854255.42NPL'protein_coding'724DEGain20.2110EU ES AB NPL20.00
1864375.38ISLR'protein_coding'24DEGain41.520N/AISLRN/A
1874385.37DPYSL3'protein_coding'215DEGain41.240N/ADPYSL3N/A
1884395.37LEMD2'protein_coding'29AEGain20.5310AB IR E2_Da0
1894415.36CEP110'protein_coding'1162AEGain13.6722EU ES AB E45_Aa72.22
1904435.35AC009093.10'protein_coding'17AEGain7.271AB E3_Aa0
1914445.35TSPAN7'protein_coding'210DEGain40.780N/ATSPAN7N/A
1924465.35TLR4'protein_coding'26DEGain40.700N/ATLR4N/A
1934495.33MCCC1'protein_coding'221AEGain11.246EU ES I14_SR650.00
1944545.32FUBP1'protein_coding'526AEGain9.1410EU AB IR I210.00
1954555.32PCOLCE'protein_coding'19DEGain19.094EU AB PCOLCE0.00
1964565.32ATG16L2'protein_coding'118AEGain11.009EU AB IR I3_AR30
1974615.30EIF2AK4'protein_coding'239AEGain8.0013EU AB IR I3825.00
1984735.28POLE2'protein_coding'119AEGain9.903EU AB E19_Aa0.00
1994765.28DLAT'protein_coding'216AEGain20.404EU AB E14_Da50.00
2004775.28COL6A3'protein_coding'850DEGain38.820N/ACOL6A3N/A
2014805.28SPEN'protein_coding'217AEGain6.8319EU ES AB E11a_E12a76.47
2024815.28RHBDD2'protein_coding'25AEGain7.131ES E2a_E5a0
2034825.27DLEU2L'protein_coding'39AEGain5.9815EU AB ER2e77.78
2044845.27TGFBI'protein_coding'219DEGain38.620N/ATGFBIN/A
2054855.27MND1'protein_coding'18AEGain9.101CE I4_AR10
2064865.27HP1BP3'protein_coding'625AEGain28.717EU AB E6_Db0.00
2074875.27AIF1'protein_coding'59AEGain90.3110EU AB E3a_E4b87.50
2084915.26RNASE1'protein_coding'34DEGain38.310N/ARNASE1N/A
2094925.26GZMK'protein_coding'15DEGain38.261EU GZMK0
2104965.25MXRA5'protein_coding'210DEGain38.110N/AMXRA5N/A
2114975.25HRB'protein_coding'523AEGain16.904EU AB E15_Dc100.00
2125025.23AF347015.1'Mt_tRNA'11DEGain37.650N/AAF347015.1N/A
2135045.23PTK2B'protein_coding'438AEGain24.3910EU AB IR I28_AR266.67
2145065.22DARC'protein_coding'36DEGain37.400N/ADARCN/A
2155075.22SRRM2'protein_coding'421AEGain6.4512EU ES AB E10_Aa90.00
2165085.22TMEM41B'protein_coding'18AEGain15.1912EU AB CE E3a_E4a85.71
2175095.22FMOD'protein_coding'13DEGain37.320N/AFMODN/A
2185115.22C11orf80'protein_coding'217AEGain6.697EU AB CE I5_AR150.00
2195155.20KIAA0090'protein_coding'531AEGain7.335EU AB CE E23_Dc100.00
2205205.19LIMS1'protein_coding'617AEGain106.5310EU ES AB ER15b57.14
2215225.19FKBP11'protein_coding'16AEGain9.472EU AB E5_Da0
2225235.18INO80'protein_coding'342AEGain5.435EU E3a_E4a75.00
2235245.18LMO7'protein_coding'635AEGain29.609EU ES AB CE ENST0000034154740.00
2245255.18RGL1'protein_coding'323DEGain36.230N/ARGL1N/A
2255265.18LILRB4'protein_coding'522DEGain36.220N/ALILRB4N/A
2265275.18CDC2'protein_coding'515AEGain8.4610EU AB E8_Da57.14
2275295.18RAMP2'protein_coding'14DEGain36.190N/ARAMP2N/A
2285305.18PAXIP1'protein_coding'427AEGain6.0514EU AB IR CE I17_AR20.00
2295325.17SLC20A2'protein_coding'111AEGain10.445EU CE I1_SR90
2305335.17HTRA1'protein_coding'19DEGain36.070N/AHTRA1N/A
2315385.16ING3'protein_coding'213AEGain7.118EU ES E6a_E7a50.00
2325395.16LOXL1'protein_coding'28DEGain35.840N/ALOXL1N/A
2335405.16BCL2A1'protein_coding'23AEGain12.805EU ES E2a_E3a100.00
2345415.16SGK1'protein_coding'418AEGain17.584EU ES ENST000003678580.00
2355435.16COMP'protein_coding'119DEGain35.720N/ACOMPN/A
2365475.15AE000661.1'IG_J_gene'11DEGain35.480N/AAE000661.1N/A
2375485.15TNFRSF1A'protein_coding'110DEGain35.470N/ATNFRSF1AN/A
2385505.14SDC3'protein_coding'39DEGain35.340N/ASDC3N/A
2395515.14LAGE3'protein_coding'25AEGain23.042EU AB E2_Db0
2405525.14ZBTB44'protein_coding'313AEGain8.0226EU AB IR E9_Aa60.00
2415565.13CTSO'protein_coding'18DEGain17.243EU CTSO100.00
2425575.13SPTY2D1'protein_coding'28AEGain8.425EU AB E6_Da50.00
2435585.13PMP22'protein_coding'39DEGain35.040N/APMP22N/A
2445595.13CLK1'protein_coding'418AEGain22.8717EU AB IR E6_Aa16.67
2455605.13UBE2I'protein_coding'716AEGain6.665EU ES AB ER10c33.33
2465615.12FAHD2A'protein_coding'18AEGain8.003AB CE I5_AR30
2475645.12PTP4A1'protein_coding'310AEGain5.689EU AB E6_Db66.67
2485655.12UROS'protein_coding'515AEGain18.155EU CE I8_AR4100.00
2495675.11THBS2'protein_coding'224DEGain34.650N/ATHBS2N/A
2505695.11ERF'protein_coding'14AEGain4.191AB E3_Aa0
2515715.11LILRB1'protein_coding'726AEGain7.531AB E2_Ad0


Candidate Differential and Alternative Expression Genes (Loss ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1115.58BRE'protein_coding'721AELoss-1448.8311EU AB IR I1_AR175.00
2214.56HLA-DRB1'protein_coding'16AELoss-823.353EU E2a_E3a50.00
3314.27HLA-B'protein_coding'521AELoss-579.017EU E3a_E4a33.33
4413.28RPL7'protein_coding'517AELoss-313.0518EU ES AB CE ER7a63.64
5512.84RPL28'protein_coding'15AELoss-1797.624EU AB ER3a0.00
6612.23PTPRG'protein_coding'439AELoss-82.507EU CE I1_AR3866.67
7712.17TOR1AIP1'protein_coding'415AELoss-102.253EU AB E2a_E3a100.00
8911.28HLA-DQB1'protein_coding'817AELoss-96.595EU ES AB E6a_E9a33.33
91011.17AL671277.5'protein_coding'112AELoss-38.0822EU AB IR CE E7_Aa75.00
101110.82PCNP'protein_coding'25AELoss-61.917EU AB IR I1_SR150.00
111210.56FNIP1'protein_coding'320AELoss-74.678EU AB CE I15_AR166.67
121410.19WDR68'protein_coding'18AELoss-54.926EU E5a_E6a100.00
13159.80RPL37'protein_coding'28AELoss-1286.849EU ES AB ER2b66.67
14169.73TBC1D4'protein_coding'221AELoss-30.2833EU ES AB CE ER9a88.89
15199.17AC004833.1'pseudogene'13AELoss-36.722AB E2_Da0
16209.17AC004448.3'pseudogene'12AELoss-4.373EU AB E2_Aa0
17228.96IGHD'IG_C_gene'27DELoss-499.420N/AIGHDN/A
18238.88RPL23A'protein_coding'39AELoss-161.109EU IR ER4a60.00
19248.74TAOK3'protein_coding'225AELoss-47.7015EU CE I3_AR657.14
20258.72C15orf57'protein_coding'25AELoss-68.922EU ES E1a_E3a100.00
21278.71TMEM66'protein_coding'16AELoss-37.792EU CE I1_AR20
22288.65PRPF18'protein_coding'419AELoss-149.4110EU ES AB E3_Da20.00
23318.45FOSB'protein_coding'14DELoss-349.733EU AB FOSB0
24328.43D87015.2'miRNA'11DELoss-344.640N/AD87015.2N/A
25338.42TRAPPC10'protein_coding'224AELoss-40.242EU I3_SR10
26348.31RP11-488L18.4'unprocessed_pseudogene'14AELoss-13.582EU E3a_E4a0
27358.28HLA-DRB5'protein_coding'27AELoss-245.273EU ER7a0.00
28368.23AL163011.3'rRNA_pseudogene'11DELoss-299.390N/AAL163011.3N/A
29388.19HLA-J'protein_coding'412AELoss-19.599EU AB E1_Da66.67
30398.17HIST1H2AC'protein_coding'35AELoss-18.272EU AB E3_Aa0
31408.16AC112777.7'rRNA_pseudogene'11DELoss-285.720N/AAC112777.7N/A
32418.12AP1G2'protein_coding'223AELoss-41.1815ES AB IR CE E18a_E20a0.00
33428.12ADAM10'protein_coding'426AELoss-20.829EU ES AB CE I4_AR150.00
34438.12AC010970.2'processed_pseudogene'11DELoss-278.380N/AAC010970.2N/A
35448.09AC004866.1'rRNA_pseudogene'11DELoss-273.300N/AAC004866.1N/A
36458.08SMARCA5'protein_coding'124AELoss-13.835EU ES E13a_E15a50.00
37468.06FAM172A'protein_coding'213AELoss-17.8911EU CE I10_AR210.00
38497.97AC091982.3'pseudogene'12AELoss-23.051AB E2_Aa0
39517.96ESNA1'protein_coding'522AELoss-19.9211EU ES AB CE I12_AR175.00
40527.94CWC15'protein_coding'18AELoss-23.473EU AB E6a_E7a0.00
41537.91GAB1'protein_coding'212AELoss-24.012EU CE I3_AR40
42547.90AC044839.16'rRNA_pseudogene'11DELoss-238.350N/AAC044839.16N/A
43567.87RNGTT'protein_coding'318AELoss-12.3515EU AB CE E1a_E2a41.67
44577.86FER'protein_coding'120AELoss-30.865EU CE I2_AR20.00
45587.81TMEM119'protein_coding'25AELoss-2.343AB E2_Ab0
46617.77AC010468.5'pseudogene'12AELoss-28.501EU E1a_E2a0
47627.76SNX6'protein_coding'420AELoss-10.1314EU CE I11_SR290.91
48647.73H3F3A'protein_coding'411AELoss-21.6111EU AB IR E2_Da40.00
49677.68C1orf71'protein_coding'315AELoss-22.552EU CE I2_AR10
50697.63NLRC3'protein_coding'325AELoss-26.171EU E10a_E11a0
51707.60FAM152A'protein_coding'512AELoss-17.394EU IR I1100.00
52717.60SCP2'protein_coding'521AELoss-16.125EU CE I12_AR150.00
53747.53SLC37A1'protein_coding'323AELoss-32.4820ES AB IR CE E6_Da0
54797.44RP5-1022P6.2'protein_coding'220AELoss-12.8010EU CE I2_AR175.00
55807.41MGEA5'protein_coding'318AELoss-20.403EU CE I9_AR10
56837.34TCTN1'protein_coding'827AELoss-3.0818EU ES AB CE E3_Aa53.85
57847.33MOBKL3'protein_coding'616AELoss-21.2916EU ES AB E2a_E5a72.73
58887.28SSU_rRNA_5'rRNA'11DELoss-155.610N/ASSU_rRNA_5N/A
59897.28D87024.1'miRNA'11DELoss-155.520N/AD87024.1N/A
60907.25IGL@'IG_V_gene'12DELoss-152.460N/AIGL@N/A
61947.16IGHG4'IG_C_gene'29AELoss-5.039EU AB E1_Da66.67
62957.15FCER1G'protein_coding'27AELoss-2.066EU AB E6_Aa50.00
63967.14SAPS1'protein_coding'124AELoss-114.021EU E17a_E18a0
64977.11PSMA8'protein_coding'29AELoss-6.404EU CE I4_AR1100.00
651007.08UCHL5'protein_coding'927AELoss-11.6323EU AB IR CE ER2d78.57
661047.06PHIP'protein_coding'242AELoss-20.8814EU AB CE I4_SR150.00
671067.05ANP32E'protein_coding'514AELoss-10.976EU AB ER1a75.00
681087.04FAM3C'protein_coding'110AELoss-14.595EU E6a_E7a0.00
691097.01AC026250.16'protein_coding'112AELoss-12.577EU ES AB E9_Da100.00
701117.00ADD1'protein_coding'624AELoss-14.957EU ER18a66.67
711126.99CREB5'protein_coding'616AELoss-14.799EU ES AB CE I1_AR340.00
721136.99C8orf76'protein_coding'29AELoss-15.031I4_SR10
731146.99GOLT1B'protein_coding'15AELoss-7.991ES E2a_E4a0
741156.99TM9SF3'protein_coding'115AELoss-10.758EU CE I4_AR166.67
751166.97C7orf10'protein_coding'319AELoss-102.121CE I15_AR100
761206.94FOXN3'protein_coding'27AELoss-12.533EU AB E2_Da100.00
771246.92CEP57'protein_coding'211AELoss-12.166EU ES E6a_E9a0.00
781266.88NR4A1'protein_coding'615DELoss-117.577EU ES AB NR4A10.00
791276.86RHBDD1'protein_coding'311AELoss-15.823AB CE E1_Da0
801286.86SMC4'protein_coding'429AELoss-13.4027EU ES AB IR ER2b80.95
811306.83TTC3'protein_coding'451AELoss-10.6829EU ES E45a_E47a64.29
821326.82ERBB2IP'protein_coding'628AELoss-17.6925EU ES CE E22a_E23a69.57
831336.79IGLV2-5'IG_pseudogene'11DELoss-110.460N/AIGLV2-5N/A
841346.79ATAD2B'protein_coding'231AELoss-12.6412EU AB CE I1_AR133.33
851366.77C9orf41'protein_coding'311AELoss-6.487EU AB CE E1_Ab75.00
861376.77CDK6'protein_coding'18AELoss-10.957EU AB IR CE I2_AR10.00
871386.77SSU_rRNA_5'rRNA'11DELoss-108.830N/ASSU_rRNA_5N/A
881406.74RB1'protein_coding'127AELoss-12.5914EU CE I1_AR670.00
891416.72PLEKHK1'protein_coding'417AELoss-17.898EU AB ER1a40.00
901426.72KIAA0430'protein_coding'332AELoss-12.292ES E24a_E27a0.00
911436.72TGFBR2'protein_coding'311AELoss-11.971CE I1_AR20
921456.70TMEM167A'protein_coding'14AELoss-10.891I1_SR20
931466.68ANKRD46'protein_coding'39AELoss-6.737EU AB CE E1_Da66.67
941476.66TMED5'protein_coding'37AELoss-6.594EU CE I1_AR10.00
951506.63HSD17B4'protein_coding'124AELoss-6.805EU CE I2_AR466.67
961516.63KIAA1033'protein_coding'234AELoss-8.2010EU ES E24a_E25a44.44
971526.62CCDC90B'protein_coding'19AELoss-4.5312EU ES AB E1a_E2a80.00
981536.60BRDG1'protein_coding'211AELoss-11.266EU ES AB E3a_E5a50.00
991546.60AC116654.4'IG_V_gene'12DELoss-97.160N/AAC116654.4N/A
1001556.60PCBD2'protein_coding'25AELoss-16.924IR I3_AR110
1011566.59AHR'protein_coding'213AELoss-18.114EU AB IR I11_SR10
1021616.51ZNF813'protein_coding'26AELoss-13.174CE I1_AR10
1031626.50AHSA2'protein_coding'723AELoss-6.3427EU ES AB IR CE E11_Db12.50
1041636.50TMEM50A'protein_coding'17AELoss-12.921ES E2a_E4a0
1051646.48C1orf103'protein_coding'24AELoss-8.236EU AB E1_Da75.00
1061666.48AEBP2'protein_coding'313AELoss-19.4811EU AB CE E1_Da25.00
1071716.43TALDO1'protein_coding'18AELoss-52.883EU ER1a0.00
1081726.43HLA-DOA'protein_coding'28AELoss-11.781ES E3b_E5a0
1091736.41LIPA'protein_coding'418AELoss-3.492EU AB E2_Da0
1101746.41MGST3'protein_coding'717AELoss-6.681EU ER10a0
1111766.41LGALS1'protein_coding'14AELoss-10.691CE I1_AR30
1121776.40JUN'protein_coding'11DELoss-84.270N/AJUNN/A
1131786.39NUDT4'protein_coding'15AELoss-11.385EU E3a_E4a75.00
1141816.39BIRC3'protein_coding'211AELoss-10.036EU ES E1a_E3a80.00
1151836.36GOLGA3'protein_coding'124AELoss-47.985EU AB IR CE I1_AR20
1161866.34FAM126B'protein_coding'112AELoss-14.625EU CE I1_SR40.00
1171876.34SENP7'protein_coding'729AELoss-6.1414EU AB CE I4_AR230.00
1181886.34MS4A7'protein_coding'27AELoss-13.4111EU ES AB IR CE E3a_E4a75.00
1191916.33IFITM2'protein_coding'27AELoss-14.421EU E1c_E2a0
1201936.32MAP3K12'protein_coding'115AELoss-14.6114EU AB IR I6_AR137.50
1211956.31CSF2RA'protein_coding'820AELoss-2.0316EU ES AB E14_Da64.29
1221966.31HNRNPH3'protein_coding'212AELoss-13.286EU ES AB E2a_E5a25.00
1231976.30FUSIP1'protein_coding'615AELoss-13.776EU AB E1_Ad50.00
1241986.29PPP1R15A'protein_coding'13DELoss-78.340N/APPP1R15AN/A
1252006.26GCDH'protein_coding'112AELoss-60.653IR I6_AR20
1262076.22KIAA1586'protein_coding'14AELoss-8.231EU E1a_E2a0
1272086.22LEPROTL1'protein_coding'25AELoss-6.175EU ES CE I1_AR266.67
1282096.21AFF3'protein_coding'429AELoss-10.066EU ES AB CE E1a_E5a50.00
1292106.20AC007599.6'rRNA_pseudogene'11DELoss-73.650N/AAC007599.6N/A
1302126.20EGR4'protein_coding'12DELoss-73.400N/AEGR4N/A
1312146.18D87023.1'IG_J_gene'11DELoss-72.390N/AD87023.1N/A
1322166.15SMC6'protein_coding'335AELoss-4.5313EU ES AB IR I5_AR128.57
1332176.15SH3YL1'protein_coding'727AELoss-6.008EU AB CE ER12a50.00
1342186.14STAT4'protein_coding'328AELoss-6.6018EU AB CE E2_Da50.00
1352256.11ASNS'protein_coding'316AELoss-9.142EU ES E1a_E2b100.00
1362276.11ENTPD1'protein_coding'414AELoss-7.032EU CE I1_AR10
1372286.11FNBP1'protein_coding'525AELoss-16.939EU ES AB CE E12a_E15b100.00
1382296.10KCNN4'protein_coding'211AELoss-10.163EU ES CE E5a_E7a0.00
1392306.09C14orf24'protein_coding'311AELoss-7.8311EU AB IR E3_Ab83.33
1402316.08RPL3'protein_coding'417AELoss-402.8316EU AB IR ER9b28.57
1412326.08IGLV3-21'IG_V_gene'12DELoss-67.510N/AIGLV3-21N/A
1422336.08GNG10'protein_coding'411AELoss-2.877EU ER1b83.33
1432356.07LY75'protein_coding'443AELoss-4.1118EU ES AB CE I1_SR153.85
1442406.04STK17B'protein_coding'210AELoss-13.4910EU AB CE E2_Da33.33
1452416.03C14orf129'protein_coding'14AELoss-6.232AB CE E1_Da0
1462426.03GTF2I'protein_coding'335AELoss-11.811ES E30a_E32a0
1472456.01BNIP2'protein_coding'212AELoss-7.239EU AB CE E1_Da66.67
1482476.01AB019439.1'IG_V_gene'12DELoss-64.630N/AAB019439.1N/A
1492486.01C18orf1'protein_coding'59AELoss-6.979EU ES AB CE ER5a100.00
1502516.00CAMK2D'protein_coding'730AELoss-9.2614EU AB IR E1_Da0.00
1512555.98SRP_euk_arch'misc_RNA'11DELoss-63.080N/ASRP_euk_archN/A
1522615.94ZNF682'protein_coding'37AELoss-9.584EU AB CE E3a_E4a0.00
1532625.94ERO1LB'protein_coding'320AELoss-12.327EU ES E1a_E3a50.00
1542645.93EHMT1'protein_coding'534AELoss-74.905EU ES CE I6_AR10.00
1552655.92PTER'protein_coding'39AELoss-6.992EU I1_SR20
1562665.91DOPEY2'protein_coding'238AELoss-11.8112EU I2_SR350.00
1572695.90KIAA0528'protein_coding'228AELoss-6.686EU E7a_E8a40.00
1582715.90DTWD2'protein_coding'16AELoss-10.442EU CE I1_AR10
1592725.89PJA2'protein_coding'212AELoss-6.085EU CE I1_AR266.67
1602735.89ZMYM2'protein_coding'643AELoss-5.4414EU ES AB E1_Db40.00
1612745.89AL122127.6'IG_J_gene'11DELoss-59.130N/AAL122127.6N/A
1622755.88IGLV3-1'IG_V_gene'12DELoss-59.010N/AIGLV3-1N/A
1632765.88MEMO1'protein_coding'415AELoss-7.266EU AB E2_Ac75.00
1642785.86BUB3'protein_coding'414AELoss-8.4313EU AB E1a_E2a88.89
1652815.85TMC8'protein_coding'217AELoss-9.142ES E9a_E12a100.00
1662835.84HIST1H2BD'protein_coding'23AELoss-10.583EU AB E1_Da0.00
1672845.84AL122127.6'IG_J_gene'11DELoss-57.170N/AAL122127.6N/A
1682855.84CD47'protein_coding'519AELoss-4.1313EU AB CE I1_SR157.14
1692865.83MBNL2'protein_coding'717AELoss-17.3719EU ES AB E6c_E7a88.24
1702885.83SMC5'protein_coding'125AELoss-11.8516EU ES CE I1_AR271.43
1712895.82AB019439.1'IG_V_gene'12DELoss-56.611EU AB019439.10
1722905.82ZCCHC10'protein_coding'25AELoss-9.562EU ES E3a_E5a0.00
1732925.82SAR1A'protein_coding'619AELoss-11.635EU ES E1a_E4b50.00
1742935.81WDR43'protein_coding'221AELoss-11.421I1_SR10
1752955.81BZW1'protein_coding'523AELoss-10.594EU ES AB E1a_E5a0.00
1762965.80ZNF322A'protein_coding'14AELoss-3.132EU E1a_E2a0.00
1772985.80HSPA6'protein_coding'11DELoss-55.820N/AHSPA6N/A
1782995.80AGPAT5'protein_coding'18AELoss-5.532EU AB E1_Da0
1793005.79IGLV4-69'IG_V_gene'12DELoss-55.410N/AIGLV4-69N/A
1803025.79ZNF808'protein_coding'14AELoss-10.671CE I1_AR40
1813055.77IGHA1'IG_C_gene'13DELoss-54.580N/AIGHA1N/A
1823065.77PGAM1'protein_coding'14AELoss-27.743EU E1a_E2a0.00
1833085.76JUND'protein_coding'11DELoss-54.230N/AJUNDN/A
1843115.75ZNF431'protein_coding'15AELoss-9.511AB E2_Da0
1853165.73ZNF44'protein_coding'419AELoss-6.707EU AB IR CE I12_SR2100.00
1863195.72IGHJ3P'IG_pseudogene'11DELoss-52.800N/AIGHJ3PN/A
1873205.71AB019441.1'IG_V_gene'12DELoss-52.330N/AAB019441.1N/A
1883235.70ZDHHC14'protein_coding'210AELoss-8.931I1_SR180
1893255.70CDC42'protein_coding'411AELoss-8.594EU ES E7a_E8a33.33
1903265.70IGLVI-70'IG_pseudogene'12DELoss-51.820N/AIGLVI-70N/A
1913275.69TPP2'protein_coding'433AELoss-8.8818EU ES AB E2a_E3a57.14
1923285.69ZNF141'protein_coding'14AELoss-10.814EU AB I3_SR10
1933295.69ALCAM'protein_coding'316AELoss-6.363EU I1_SR2100.00
1943325.67SUPT16H'protein_coding'126AELoss-11.435EU CE I1_AR133.33
1953365.67TADA2L'protein_coding'321AELoss-34.563EU CE I11_AR6100.00
1963385.66AIDA'protein_coding'212AELoss-5.155EU AB E1_Ab0.00
1973395.66ARIH1'protein_coding'216AELoss-23.044EU AB E1_Ab100.00
1983405.66ZNRD1'protein_coding'49AELoss-10.001ES E1d_E3a0
1993425.65SPG7'protein_coding'434AELoss-10.431I9_SR10
2003435.65ZNF493'protein_coding'47AELoss-2.293EU AB E4_Da0.00
2013455.65HSPA1B'protein_coding'11DELoss-50.080N/AHSPA1BN/A
2023465.64QRSL1'protein_coding'213AELoss-9.725EU ES CE I1_AR10.00
2033505.63RRM2B'protein_coding'413AELoss-10.745EU AB CE I1_AR10.00
2043535.61IGHM'IG_C_gene'26DELoss-48.874EU AB IGHM50.00
2053565.60IGLC1'IG_C_gene'11DELoss-48.610N/AIGLC1N/A
2063575.60AB019440.1'IG_V_gene'12DELoss-48.410N/AAB019440.1N/A
2073585.59ACBD5'protein_coding'620AELoss-8.819EU AB IR I2_AR140.00
2083595.59NFAT5'protein_coding'316AELoss-6.437EU ES CE I15_AR140.00
2093605.59PGS1'protein_coding'319AELoss-25.216EU AB CE I7_AR60
2103655.58SIDT1'protein_coding'227AELoss-6.9519EU CE I24_AR176.47
2113665.58FAM122C'protein_coding'39AELoss-8.7411EU AB CE E3_Aa66.67
2123675.58MCTP2'protein_coding'225AELoss-31.047EU AB CE I1_AR133.33
2133695.58UFC1'protein_coding'16AELoss-12.942ES E2a_E4a0.00
2143705.57RBM5'protein_coding'227AELoss-10.4110ES AB IR CE E16a_E18a0.00
2153715.57WSB1'protein_coding'29AELoss-10.566EU ES AB IR E1a_E3a50.00
2163725.57D87023.1'IG_J_gene'11DELoss-47.610N/AD87023.1N/A
2173735.57ZBTB1'protein_coding'27AELoss-11.6511EU ES AB IR CE I150.00
2183745.57IGHG3'IG_C_gene'610DELoss-47.424EU AB IGHG30.00
2193755.56C14orf135'protein_coding'516AELoss-12.8015EU AB CE I1_AR160.00
2203815.54AC007000.2'protein_coding'18AELoss-10.174EU AB CE E2_Aa0
2213825.54PIK3AP1'protein_coding'320AELoss-8.266EU ES AB CE E16a_E19a0.00
2223875.52RND1'protein_coding'15DELoss-45.850N/ARND1N/A
2233905.51OPA1'protein_coding'837AELoss-10.326EU ES CE I30_SR333.33
2243925.51CD53'protein_coding'18AELoss-8.923ES E4a_E8a50.00
2253935.51VPS53'protein_coding'326AELoss-27.812CE I5_AR10
2263945.50CEP63'protein_coding'417AELoss-11.965EU AB CE I2_AR10
2273975.49CCDC144A'protein_coding'536AELoss-26.4533EU ES AB IR ER26a57.14
2284005.47BAZ1A'protein_coding'329AELoss-6.5622EU AB IR CE I176.47
2294015.47TRFP'protein_coding'410AELoss-11.491ES E3a_E5a0
2304045.46SETX'protein_coding'327AELoss-9.295EU CE I1_SR150.00
2314065.46CLEC16A'protein_coding'432AELoss-8.3910EU AB E22_Da57.14
2324075.46C3orf31'protein_coding'17AELoss-10.594EU AB CE I1_AR20
2334095.46RNF149'protein_coding'17AELoss-7.213EU CE I1_SR10
2344125.45WDR66'protein_coding'223AELoss-5.877EU E16a_E17a50.00
2354135.45WDR44'protein_coding'529AELoss-4.156EU ES ER22a20.00
2364145.45RWDD1'protein_coding'39AELoss-10.177EU E2a_E3a83.33
2374185.43Z94277.1'pseudogene'11DELoss-43.260N/AZ94277.1N/A
2384205.43ZNF619'protein_coding'27AELoss-6.172EU ER5a100.00
2394215.42AL122127.6'IG_J_gene'11DELoss-42.960N/AAL122127.6N/A
2404235.42PAOX'protein_coding'920AELoss-6.342EU AB E7_Aa0
2414265.42CTSS'protein_coding'18AELoss-6.853ES AB CE E5_Da0
2424275.40RBKS'protein_coding'18AELoss-256.543EU AB CE I1_AR10
2434285.40ZNF700'protein_coding'14AELoss-6.861CE I1_AR10
2444295.40U1'snRNA'11DELoss-42.180N/AU1N/A
2454305.40AC009958.3'IG_V_gene'12DELoss-42.170N/AAC009958.3N/A
2464315.39SIGIRR'protein_coding'312AELoss-5.6011EU ES AB CE E9_Aa85.71
2474325.39AB019438.1'IG_V_gene'12DELoss-42.050N/AAB019438.1N/A
2484335.39DLG1'protein_coding'833AELoss-7.396EU ES CE I6_AR70.00
2494345.38CD40'protein_coding'414AELoss-23.378EU ES AB IR ENST000003722760.00
2504355.38ZC3H6'protein_coding'216AELoss-8.0313EU AB CE E1_Da70.00
2514365.385_8S_rRNA'rRNA'11DELoss-41.580N/A5_8S_rRNAN/A