Summary page for comparison: 'PostTx_vs_PreTx' (HS0806_vs_HS0804) - Project: FL_Tx


Download complete candidate list as tab delimited text file: PostTx_vs_PreTx.txt


Summary of Differential (DE) and Alternative Expression (AE) for all gene loci:

Total Candidate Genes: 4,068 (of 36,953 possible genes)

DE Genes: 829

AE Genes: 3,495

Alternative Exon Usage (EU) Genes: 2,882

Alernative Exon Skipping (ES) Genes: 203

Alternative Exon Boundary (AB) Genes: 422

Intron Retention (IR) Genes: 105

Cryptic Exon (CE) Genes: 217


Candidate Differential AND Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
117.92AC116654.4'IG_V_gene'12DELoss-241.480N/AAC116654.4N/A
227.53IGHV@'IG_V_gene'12DELoss-185.110N/AIGHV@N/A
336.99AC110080.2'IG_V_gene'12DELoss-126.720N/AAC110080.2N/A
446.95SC-9C5.12'protein_coding'35AELoss-54.072EU ER2b100.00
556.79D87023.1'IG_J_gene'11DELoss-110.900N/AD87023.1N/A
666.73IGLV3-25'IG_V_gene'12DELoss-105.930N/AIGLV3-25N/A
776.67AB019438.1'IG_V_gene'12DELoss-102.130N/AAB019438.1N/A
886.63D87016.2'IG_V_gene'12DELoss-98.920N/AD87016.2N/A
996.57AB019440.1'IG_V_gene'12DELoss-94.970N/AAB019440.1N/A
10106.52IGLV3-21'IG_V_gene'12DELoss-91.520N/AIGLV3-21N/A
11116.50IGHA2'IG_C_gene'25AELoss-8.952EU CE I3_AR10
12126.40RPL18A'protein_coding'15AELoss-64.562EU ER1a0.00
13136.35IGLV3-1'IG_V_gene'12DELoss-81.460N/AIGLV3-1N/A
14146.31TGOLN2'protein_coding'715AEGain9.453EU ER4b100.00
15156.31AB019441.1'IG_V_gene'12DELoss-79.370N/AAB019441.1N/A
16166.24AC006548.22'pseudogene'12DELoss-75.730N/AAC006548.22N/A
17176.07AB019439.1'IG_V_gene'12DELoss-67.170N/AAB019439.1N/A
18185.90AB019439.1'IG_V_gene'12DELoss-59.870N/AAB019439.1N/A
19195.88AB019440.1'IG_V_gene'12DELoss-58.920N/AAB019440.1N/A
20205.87AC096579.1'IG_C_gene'11DELoss-58.540N/AAC096579.1N/A
21215.83PLSCR3'protein_coding'313AEGain9.531CE I7_AR20
22225.77AC096579.1'IG_J_gene'11DELoss-54.410N/AAC096579.1N/A
23235.75IGKV1-5'IG_V_gene'12DELoss-53.761EU IGKV1-50
24245.74TMEM55B'protein_coding'29AELoss-9.002EU AB ER7b0
25255.68PLA2G2A'protein_coding'28DELoss-51.130N/APLA2G2AN/A
26265.67AB019440.1'IG_V_gene'12DELoss-50.940N/AAB019440.1N/A
27275.64IGLV4-69'IG_V_gene'12DELoss-49.910N/AIGLV4-69N/A
28285.62AB019439.1'IG_V_gene'12DELoss-49.310N/AAB019439.1N/A
29295.62AC096579.1'IG_J_gene'11DELoss-49.030N/AAC096579.1N/A
30305.59PI16'protein_coding'17DELoss-48.030N/API16N/A
31315.58AB019440.1'IG_V_gene'12DELoss-47.690N/AAB019440.1N/A
32325.55IGLV6-57'IG_V_gene'12DELoss-46.940N/AIGLV6-57N/A
33335.55IGLV2-23'IG_V_gene'12DELoss-46.800N/AIGLV2-23N/A
34345.53IGLV3-19'IG_V_gene'12DELoss-46.230N/AIGLV3-19N/A
35355.51IGHG4'IG_C_gene'29DELoss-45.534EU CE IGHG40.00
36365.47IGLV1-44'IG_V_gene'12DELoss-44.390N/AIGLV1-44N/A
37375.45CTNND1'protein_coding'725AEGain7.882EU AB ER22a0
38385.38AB019440.1'IG_V_gene'12DELoss-41.610N/AAB019440.1N/A
39395.26EPHX1'protein_coding'211AEGain5.682EU AB E9_Da0
40405.22AKAP9'protein_coding'760AEGain9.134EU E35a_E36a0.00
41415.19AC096579.1'IG_J_gene'11DELoss-36.390N/AAC096579.1N/A
42425.18VSIG6'protein_coding'12DELoss-36.290N/AVSIG6N/A
43435.18WDR42A'protein_coding'418AELoss-7.873EU AB IR E2a_E3a0
44445.17RPL14'protein_coding'28AELoss-7.791EU E4a_E5a0
45455.15AC096579.1'IG_J_gene'11DELoss-35.480N/AAC096579.1N/A
46465.13AB019437.1'IG_V_gene'12DELoss-35.110N/AAB019437.1N/A
47475.10AB019440.1'IG_V_gene'12DELoss-34.340N/AAB019440.1N/A
48485.09IGHG2'IG_C_gene'28DELoss-34.000N/AIGHG2N/A
49495.07IGLV2-11'IG_V_gene'12DELoss-33.490N/AIGLV2-11N/A
50505.05AC096767.3'IG_V_gene'12DELoss-33.180N/AAC096767.3N/A
51515.05EIF2AK4'protein_coding'239AEGain9.665EU IR CE E1a_E2a0.00
52525.01ZWINT'protein_coding'520AELoss-6.432EU ER8f100.00
53535.01AB019439.1'IG_V_gene'12DELoss-32.200N/AAB019439.1N/A
54545.00RAD51AP1'protein_coding'310AELoss-6.752EU E3a_E4a0.00
55554.96SFRP4'protein_coding'16DELoss-31.160N/ASFRP4N/A
56564.96JARID1B'protein_coding'330AELoss-9.042EU E3a_E4a0.00
57574.95AC096579.1'IG_J_gene'11DELoss-30.850N/AAC096579.1N/A
58584.92IGL@'IG_V_gene'12DELoss-30.250N/AIGL@N/A
59594.90AC110080.2'IG_V_gene'12DELoss-29.961EU AC110080.20
60604.89MTAP'protein_coding'312AEGain6.752EU ER1c0.00
61614.85C7orf20'protein_coding'211AELoss-7.501EU ER9b0
62624.84COQ7'protein_coding'16AELoss-9.051EU E5a_E6a0
63634.83RNASE1'protein_coding'34DELoss-28.510N/ARNASE1N/A
64644.81NMNAT1'protein_coding'38AELoss-6.751EU E3a_E4a0
65654.78HDGF'protein_coding'513AEGain5.422EU ES E1a_E3a100.00
66664.77C14orf103'protein_coding'242AELoss-9.051EU E27a_E28a0
67674.77C10orf28'protein_coding'414AELoss-8.461EU E1a_E2a0
68684.77EIF2S2'protein_coding'19AELoss-8.481EU E2a_E3a0
69694.76MFAP5'protein_coding'210DELoss-27.130N/AMFAP5N/A
70704.75CRELD2'protein_coding'415AEGain8.551AB E10_Aa0
71714.75GMPPA'protein_coding'624AEGain7.993EU ER12c0.00
72724.73FCGR2B'protein_coding'817AEGain5.742CE I8_AR20
73734.72FKBP15'protein_coding'128AEGain7.182EU I14_SR10
74744.72IGKV4-1'IG_V_gene'12DELoss-26.300N/AIGKV4-1N/A
75754.68PPP1R11'protein_coding'69AEGain6.242EU ES ER3c0.00
76764.67AB019440.1'IG_V_gene'12DELoss-25.520N/AAB019440.1N/A
77774.66AUTS2'protein_coding'321AELoss-5.892EU ER6a0.00
78784.66AB019441.1'IG_V_gene'12DELoss-25.260N/AAB019441.1N/A
79794.65COMP'protein_coding'119DELoss-25.170N/ACOMPN/A
80804.63AB019439.1'IG_V_gene'12DELoss-24.810N/AAB019439.1N/A
81814.59AB019440.1'IG_V_gene'12DELoss-24.140N/AAB019440.1N/A
82824.56CD84'protein_coding'613AEGain6.411EU ER4b0
83834.51AB019440.1'IG_V_gene'12DELoss-22.800N/AAB019440.1N/A
84844.51RPL9'protein_coding'18AELoss-5.031EU E7a_E8a0
85854.50TMEM149'protein_coding'25AELoss-5.562EU ES E2a_E4a100.00
86864.48AC116654.4'IG_V_gene'12DELoss-22.390N/AAC116654.4N/A
87874.47SYNE2'protein_coding'7123AEGain6.7615EU AB E116_Aa0.00
88884.46RWDD3'protein_coding'27AELoss-5.651CE I1_AR50
89894.45MIA3'protein_coding'844AEGain5.651AB E19_Da0
90904.45NUDT2'protein_coding'612AELoss-5.472EU ER6c0.00
91914.44DDX31'protein_coding'525AEGain7.394EU E12a_E13a0.00
92924.43ENO2'protein_coding'112AEGain6.231AB E2_Aa0
93934.42DNAJC11'protein_coding'421AEGain5.653EU AB E6_Aa100.00
94944.39SLC38A2'protein_coding'218AEGain6.274EU CE I5_AR100.00
95954.38ZNF83'protein_coding'27AELoss-4.461ES E3a_E5a0
96964.37DTNB'protein_coding'1226AELoss-5.733EU AB E12a_E13a0.00
97974.37PTPN4'protein_coding'127AEGain7.391EU E16a_E17a0
98984.36ORC3L'protein_coding'223AEGain6.952EU E16a_E17a0.00
99994.33AB019438.1'IG_V_gene'12DELoss-20.090N/AAB019438.1N/A
1001004.33FMR1'protein_coding'627AEGain5.191CE I15_AR20
1011014.31DUS1L'protein_coding'219AELoss-4.192EU E13a_E14b100.00
1021024.30RAP1B'protein_coding'210AELoss-5.703EU E5a_E6a0.00
1031034.30BCL2L12'protein_coding'28AELoss-6.071AB E1_Ab0
1041044.29IGLV5-45'IG_V_gene'12DELoss-19.600N/AIGLV5-45N/A
1051054.28CTGF'protein_coding'15DELoss-19.452EU CTGF0.00
1061064.28SCAPER'protein_coding'235AEGain5.651EU E10a_E11a0
1071074.27FAM149B1'protein_coding'217AELoss-6.751EU E2a_E3a0
1081084.27MBP'protein_coding'1329AEGain12.039EU AB CE ER11a33.33
1091094.25IGLV1-36'IG_V_gene'12DELoss-19.080N/AIGLV1-36N/A
1101104.24RANGRF'protein_coding'313AEGain9.562EU ER1a100.00
1111114.22AC106782.5'protein_coding'128AELoss-4.801AB E13_Da0
1121124.22NPEPPS'protein_coding'123AEGain6.822EU AB E22_Aa0
1131134.21KIF18A'protein_coding'117AEGain10.872EU E3a_E4a100.00
1141144.21AC104564.11'protein_coding'12AEGain5.651AB E2_Aa0
1151154.20GLUD1'protein_coding'214AEGain5.403EU E6a_E7a0.00
1161164.18RNF216L'protein_coding'821AELoss-9.002EU ER1d100.00
1171174.18TRIM3'protein_coding'420AELoss-6.251EU ER5b0
1181184.18BRWD3'protein_coding'141AEGain6.891EU E39a_E40a0
1191194.17ADD3'protein_coding'316AELoss-6.851ES E14a_E16a0
1201204.17LSG1'protein_coding'114AEGain5.041CE I10_AR30
1211214.17GAK'protein_coding'433AEGain5.331CE I6_AR10
1221224.16MFF'protein_coding'919AEGain5.812ES CE I4_AR50
1231234.12PRKCBP1'protein_coding'732AEGain6.232AB E24_Aa0
1241244.12AC113612.3'IG_V_gene'12DELoss-17.370N/AAC113612.3N/A
1251254.10SCG2'protein_coding'12DELoss-17.200N/ASCG2N/A
1261264.10KIAA1967'protein_coding'222AEGain4.701I8_SR30
1271274.10D87021.1'IG_V_gene'12DELoss-17.120N/AD87021.1N/A
1281284.09MKRN2'protein_coding'18AEGain6.531EU E1a_E2a0
1291294.09FBLN1'protein_coding'627DELoss-17.051ES FBLN10
1301304.08AB019439.1'IG_V_gene'12DELoss-16.920N/AAB019439.1N/A
1311314.08SERPINA9'protein_coding'310DEGain16.891EU SERPINA90
1321324.07ZCWPW1'protein_coding'524AELoss-6.051EU ER18b0
1331334.07HDAC4'protein_coding'127AEGain5.653EU E23a_E24a0.00
1341344.07SFRP2'protein_coding'13DELoss-16.780N/ASFRP2N/A
1351354.07WDR44'protein_coding'529AEGain5.972EU ER23a0.00
1361364.07REV1'protein_coding'226AELoss-5.641CE I18_AR30
1371374.05EFEMP1'protein_coding'416DELoss-16.531EU EFEMP10
1381384.04FMO5'protein_coding'313AELoss-6.001EU ER8c0
1391394.04FAM38A'protein_coding'347AEGain4.542EU AB E37_Aa0
1401404.02INTS1'protein_coding'456AEGain6.241CE I43_AR10
1411414.02CCDC106'protein_coding'16AELoss-5.361EU E2a_E3a0
1421424.01CTNS'protein_coding'317AEGain5.631AB E12_Aa0
1431434.00SMTN'protein_coding'734AEGain5.803EU E8a_E9a0.00
1441444.00GABPB1'protein_coding'413AEGain6.121AB E1_Da0
1451454.00UHRF1BP1'protein_coding'224AELoss-8.484EU E11a_E12a100.00
1461464.00FAM122C'protein_coding'39AEGain11.702EU ER5a0.00
1471473.99SLTM'protein_coding'323AEGain9.712EU ES E14a_E16a0.00
1481483.97RPL23'protein_coding'411AELoss-5.031EU E4a_E5a0
1491493.97SEMA3C'protein_coding'118DELoss-15.700N/ASEMA3CN/A
1501503.96C9orf156'protein_coding'413AELoss-4.931EU ER6b0
1511513.96WDR39'protein_coding'17AEGain5.701AB E6_Aa0
1521523.96THADA'protein_coding'1357AEGain5.293EU AB CE E36_Aa0
1531533.95AC006299.1'protein_coding'14AEGain6.552EU E2a_E3a100.00
1541543.95PLEKHG1'protein_coding'321AELoss-6.034CE I3_SR50
1551553.93EIF2C4'protein_coding'219AEGain5.651AB E19_Aa0
1561563.93FN1'protein_coding'1050DELoss-15.273EU FN10.00
1571573.93AB019438.1'IG_V_gene'12DELoss-15.240N/AAB019438.1N/A
1581583.93IGLV1-40'IG_V_gene'12DELoss-15.230N/AIGLV1-40N/A
1591593.93AC096767.3'IG_V_gene'12DELoss-15.220N/AAC096767.3N/A
1601603.93CD163'protein_coding'219DELoss-15.210N/ACD163N/A
1611613.92ENOPH1'protein_coding'16AEGain5.651ES E2a_E4a0
1621623.92DHRS12'protein_coding'210AELoss-6.752EU E2a_E3a100.00
1631633.91CSPG2'protein_coding'415DELoss-15.070N/ACSPG2N/A
1641643.91IGLV7-46'IG_V_gene'12DELoss-15.060N/AIGLV7-46N/A
1651653.91ELMO2'protein_coding'429AEGain5.651EU E4b_E5a0
1661663.91BTRC'protein_coding'518AEGain5.061EU E8a_E9a0
1671673.90SYT11'protein_coding'14AEGain5.251CE I3_AR20
1681683.89LRRC68'protein_coding'113AELoss-5.351EU E10a_E11a0
1691693.89RBM26'protein_coding'224AEGain5.441CE I12_AR10
1701703.89FAM53C'protein_coding'15AELoss-5.371EU E2a_E3a0
1711713.89ZNF197'protein_coding'513AEGain5.061AB E3_Aa0
1721723.87SNX21'protein_coding'613AELoss-4.892CE I2_AR40
1731733.87JMJD2B'protein_coding'225AEGain5.441CE I14_AR10
1741743.87AC136428.3'protein_coding'12DELoss-14.590N/AAC136428.3N/A
1751753.86IGFBP3'protein_coding'310DELoss-14.521EU IGFBP30
1761763.86HTRA3'protein_coding'210DELoss-14.500N/AHTRA3N/A
1771773.85VSIG4'protein_coding'18DELoss-14.450N/AVSIG4N/A
1781783.85SYMPK'protein_coding'227AEGain9.532EU AB E2_Aa0
1791793.85INO80D'protein_coding'213AEGain5.651EU E8a_E9a0
1801803.85SAFB2'protein_coding'224AEGain4.621EU ER7a0
1811813.84MANEA'protein_coding'27AEGain5.431EU E2a_E3a0
1821823.84RGS8'protein_coding'511DEGain14.320N/ARGS8N/A
1831833.84ATP11A'protein_coding'331AEGain5.061AB E29_Da0
1841843.84HN1'protein_coding'512AEGain4.461EU ER2a0
1851853.84MTCH2'protein_coding'113AEGain5.081I10_SR20
1861863.83PRKAR1B'protein_coding'416AELoss-4.501EU ER14b0
1871873.83AC096767.3'IG_V_gene'12DELoss-14.240N/AAC096767.3N/A
1881883.83SCP2'protein_coding'521AELoss-6.7514EU ES AB E11a_E13a50.00
1891893.83THAP7'protein_coding'26AEGain5.061AB E3_Aa0
1901903.82PTOV1'protein_coding'214AEGain10.298EU AB E10_Aa0.00
1911913.82ARHGEF7'protein_coding'833AELoss-4.801EU E17a_E18a0
1921923.82HECW2'protein_coding'231AEGain5.657EU AB CE E27_Da0
1931933.82AL928761.2'IG_C_gene'14DELoss-14.130N/AAL928761.2N/A
1941943.81DCN'protein_coding'610DELoss-14.011EU DCN0
1951953.81WDHD1'protein_coding'226AELoss-6.752EU E21a_E22a100.00
1961963.80FKBP11'protein_coding'16AEGain5.651AB E6_Aa0
1971973.80TCEA1P2'protein_coding'210AELoss-5.262EU ER6a0.00
1981983.80LYPLA2'protein_coding'719AEGain5.153EU ER8e0.00
1991993.79ITGBL1'protein_coding'214DELoss-13.870N/AITGBL1N/A
2002003.79GTF2H4'protein_coding'216AELoss-4.483EU ER1a0.00
2012013.78NUTF2'protein_coding'15AEGain8.472EU CE I4_AR20
2022023.78KAT2A'protein_coding'118AELoss-4.243EU I11_SR30.00
2032033.78IGLV4-60'IG_V_gene'12DELoss-13.690N/AIGLV4-60N/A
2042043.77BTF3L4'protein_coding'411AELoss-4.801AB E6_Da0
2052053.77SLC12A3'protein_coding'126AELoss-4.502EU CE I25_AR60
2062063.75PDLIM3'protein_coding'39AELoss-10.191EU E3a_E4a0
2072073.75VPRBP'protein_coding'333AEGain5.434ES AB IR E27a_E29a0
2082083.74EIF1AX'protein_coding'29AELoss-5.103EU E2a_E3a0.00
2092093.73RNASET2'protein_coding'419AEGain4.421EU ER6a0
2102103.71RERE'protein_coding'427AEGain10.291AB E23_Aa0
2112113.71CCDC134'protein_coding'29AEGain8.551EU E2a_E3a0
2122123.71APBB1'protein_coding'418AELoss-10.781EU E14a_E15a0
2132133.70TMEM41A'protein_coding'28AELoss-8.481ES E2a_E5a0
2142143.69FUS'protein_coding'319AELoss-4.701EU E4a_E5a0
2152153.69IGFBP6'protein_coding'14DELoss-12.910N/AIGFBP6N/A
2162163.68AL122127.6'IG_J_gene'11DELoss-12.850N/AAL122127.6N/A
2172173.68ALKBH6'protein_coding'310AEGain13.771AB E7_Aa0
2182183.68PLTP'protein_coding'318DELoss-12.781EU PLTP0
2192193.67HERC2'protein_coding'193AELoss-9.052EU E62a_E63a0.00
2202203.67DPT'protein_coding'14DELoss-12.720N/ADPTN/A
2212213.66IGLV1-41'IG_pseudogene'12DELoss-12.680N/AIGLV1-41N/A
2222223.66AB019439.1'IG_V_gene'12DELoss-12.650N/AAB019439.1N/A
2232233.66PTMA'protein_coding'725AEGain5.283EU ENST0000041006450.00
2242243.65SFRS12'protein_coding'316AEGain7.972EU AB E4_Da0
2252253.64STX17'protein_coding'18AEGain5.061AB E6_Aa0
2262263.64TTLL3'protein_coding'830AEGain7.1622EU ES E10a_E11a57.14
2272273.63AC009958.3'IG_V_gene'12DELoss-12.380N/AAC009958.3N/A
2282283.62SPAG7'protein_coding'17AELoss-8.491EU E3a_E4a0
2292293.62TTC27'protein_coding'120AEGain4.551EU E11a_E12a0
2302303.61ITPKB'protein_coding'210AELoss-7.573EU CE E1a_E2a0
2312313.61XRN1'protein_coding'243AEGain4.521EU E28a_E29a0
2322323.61LIPT1'protein_coding'57AELoss-4.751EU ER6a0
2332333.60KIAA0467'protein_coding'782AELoss-3.925EU E13a_E14a0.00
2342343.60MICAL1'protein_coding'536AEGain11.754EU AB E8_Da0.00
2352353.59ZNF318'protein_coding'311AEGain7.971EU E1a_E2a0
2362363.58TERF1'protein_coding'312AELoss-8.481EU E6a_E7a0
2372373.57TIMM44'protein_coding'113AELoss-4.141EU E6a_E7a0
2382383.57CIAPIN1'protein_coding'314AELoss-4.721EU E2a_E3a0
2392393.57FBLN5'protein_coding'314DELoss-11.858EU FBLN542.86
2402403.56DAGLB'protein_coding'115AEGain9.131EU E1a_E2a0
2412413.56CASP7'protein_coding'919AEGain4.861EU ER8b0
2422423.56DGKD'protein_coding'232AEGain5.122EU AB E12_Da0
2432433.55MTIF2'protein_coding'422AELoss-7.452EU ER17b0.00
2442443.55SNED1'protein_coding'538AELoss-3.7510EU AB ER29a20.00
2452453.55RPE'protein_coding'310AELoss-7.331EU E1a_E2a0
2462463.55CAMK1D'protein_coding'213AELoss-8.281EU E7a_E8a0
2472473.54DCTN1'protein_coding'1050AEGain4.351EU ER24b0
2482483.54TBC1D22B'protein_coding'214AELoss-3.941EU E2a_E3a0
2492493.53FIP1L1'protein_coding'318AELoss-8.712EU ES E1a_E3a0.00
2502503.53TMEM39A'protein_coding'19AEGain5.061AB E3_Aa0
2512513.53WBP1'protein_coding'310AEGain11.072EU AB E2_Aa0


Candidate Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
146.95SC-9C5.12'protein_coding'35AELoss-54.072EU ER2b100.00
2116.50IGHA2'IG_C_gene'25AELoss-8.952EU CE I3_AR10
3126.40RPL18A'protein_coding'15AELoss-64.562EU ER1a0.00
4146.31TGOLN2'protein_coding'715AEGain9.453EU ER4b100.00
5215.83PLSCR3'protein_coding'313AEGain9.531CE I7_AR20
6235.75IGKV1-5'IG_V_gene'12DELoss-53.761EU IGKV1-50
7245.74TMEM55B'protein_coding'29AELoss-9.002EU AB ER7b0
8355.51IGHG4'IG_C_gene'29DELoss-45.534EU CE IGHG40.00
9375.45CTNND1'protein_coding'725AEGain7.882EU AB ER22a0
10395.26EPHX1'protein_coding'211AEGain5.682EU AB E9_Da0
11405.22AKAP9'protein_coding'760AEGain9.134EU E35a_E36a0.00
12435.18WDR42A'protein_coding'418AELoss-7.873EU AB IR E2a_E3a0
13445.17RPL14'protein_coding'28AELoss-7.791EU E4a_E5a0
14515.05EIF2AK4'protein_coding'239AEGain9.665EU IR CE E1a_E2a0.00
15525.01ZWINT'protein_coding'520AELoss-6.432EU ER8f100.00
16545.00RAD51AP1'protein_coding'310AELoss-6.752EU E3a_E4a0.00
17564.96JARID1B'protein_coding'330AELoss-9.042EU E3a_E4a0.00
18594.90AC110080.2'IG_V_gene'12DELoss-29.961EU AC110080.20
19604.89MTAP'protein_coding'312AEGain6.752EU ER1c0.00
20614.85C7orf20'protein_coding'211AELoss-7.501EU ER9b0
21624.84COQ7'protein_coding'16AELoss-9.051EU E5a_E6a0
22644.81NMNAT1'protein_coding'38AELoss-6.751EU E3a_E4a0
23654.78HDGF'protein_coding'513AEGain5.422EU ES E1a_E3a100.00
24664.77C14orf103'protein_coding'242AELoss-9.051EU E27a_E28a0
25674.77C10orf28'protein_coding'414AELoss-8.461EU E1a_E2a0
26684.77EIF2S2'protein_coding'19AELoss-8.481EU E2a_E3a0
27704.75CRELD2'protein_coding'415AEGain8.551AB E10_Aa0
28714.75GMPPA'protein_coding'624AEGain7.993EU ER12c0.00
29724.73FCGR2B'protein_coding'817AEGain5.742CE I8_AR20
30734.72FKBP15'protein_coding'128AEGain7.182EU I14_SR10
31754.68PPP1R11'protein_coding'69AEGain6.242EU ES ER3c0.00
32774.66AUTS2'protein_coding'321AELoss-5.892EU ER6a0.00
33824.56CD84'protein_coding'613AEGain6.411EU ER4b0
34844.51RPL9'protein_coding'18AELoss-5.031EU E7a_E8a0
35854.50TMEM149'protein_coding'25AELoss-5.562EU ES E2a_E4a100.00
36874.47SYNE2'protein_coding'7123AEGain6.7615EU AB E116_Aa0.00
37884.46RWDD3'protein_coding'27AELoss-5.651CE I1_AR50
38894.45MIA3'protein_coding'844AEGain5.651AB E19_Da0
39904.45NUDT2'protein_coding'612AELoss-5.472EU ER6c0.00
40914.44DDX31'protein_coding'525AEGain7.394EU E12a_E13a0.00
41924.43ENO2'protein_coding'112AEGain6.231AB E2_Aa0
42934.42DNAJC11'protein_coding'421AEGain5.653EU AB E6_Aa100.00
43944.39SLC38A2'protein_coding'218AEGain6.274EU CE I5_AR100.00
44954.38ZNF83'protein_coding'27AELoss-4.461ES E3a_E5a0
45964.37DTNB'protein_coding'1226AELoss-5.733EU AB E12a_E13a0.00
46974.37PTPN4'protein_coding'127AEGain7.391EU E16a_E17a0
47984.36ORC3L'protein_coding'223AEGain6.952EU E16a_E17a0.00
481004.33FMR1'protein_coding'627AEGain5.191CE I15_AR20
491014.31DUS1L'protein_coding'219AELoss-4.192EU E13a_E14b100.00
501024.30RAP1B'protein_coding'210AELoss-5.703EU E5a_E6a0.00
511034.30BCL2L12'protein_coding'28AELoss-6.071AB E1_Ab0
521054.28CTGF'protein_coding'15DELoss-19.452EU CTGF0.00
531064.28SCAPER'protein_coding'235AEGain5.651EU E10a_E11a0
541074.27FAM149B1'protein_coding'217AELoss-6.751EU E2a_E3a0
551084.27MBP'protein_coding'1329AEGain12.039EU AB CE ER11a33.33
561104.24RANGRF'protein_coding'313AEGain9.562EU ER1a100.00
571114.22AC106782.5'protein_coding'128AELoss-4.801AB E13_Da0
581124.22NPEPPS'protein_coding'123AEGain6.822EU AB E22_Aa0
591134.21KIF18A'protein_coding'117AEGain10.872EU E3a_E4a100.00
601144.21AC104564.11'protein_coding'12AEGain5.651AB E2_Aa0
611154.20GLUD1'protein_coding'214AEGain5.403EU E6a_E7a0.00
621164.18RNF216L'protein_coding'821AELoss-9.002EU ER1d100.00
631174.18TRIM3'protein_coding'420AELoss-6.251EU ER5b0
641184.18BRWD3'protein_coding'141AEGain6.891EU E39a_E40a0
651194.17ADD3'protein_coding'316AELoss-6.851ES E14a_E16a0
661204.17LSG1'protein_coding'114AEGain5.041CE I10_AR30
671214.17GAK'protein_coding'433AEGain5.331CE I6_AR10
681224.16MFF'protein_coding'919AEGain5.812ES CE I4_AR50
691234.12PRKCBP1'protein_coding'732AEGain6.232AB E24_Aa0
701264.10KIAA1967'protein_coding'222AEGain4.701I8_SR30
711284.09MKRN2'protein_coding'18AEGain6.531EU E1a_E2a0
721294.09FBLN1'protein_coding'627DELoss-17.051ES FBLN10
731314.08SERPINA9'protein_coding'310DEGain16.891EU SERPINA90
741324.07ZCWPW1'protein_coding'524AELoss-6.051EU ER18b0
751334.07HDAC4'protein_coding'127AEGain5.653EU E23a_E24a0.00
761354.07WDR44'protein_coding'529AEGain5.972EU ER23a0.00
771364.07REV1'protein_coding'226AELoss-5.641CE I18_AR30
781374.05EFEMP1'protein_coding'416DELoss-16.531EU EFEMP10
791384.04FMO5'protein_coding'313AELoss-6.001EU ER8c0
801394.04FAM38A'protein_coding'347AEGain4.542EU AB E37_Aa0
811404.02INTS1'protein_coding'456AEGain6.241CE I43_AR10
821414.02CCDC106'protein_coding'16AELoss-5.361EU E2a_E3a0
831424.01CTNS'protein_coding'317AEGain5.631AB E12_Aa0
841434.00SMTN'protein_coding'734AEGain5.803EU E8a_E9a0.00
851444.00GABPB1'protein_coding'413AEGain6.121AB E1_Da0
861454.00UHRF1BP1'protein_coding'224AELoss-8.484EU E11a_E12a100.00
871464.00FAM122C'protein_coding'39AEGain11.702EU ER5a0.00
881473.99SLTM'protein_coding'323AEGain9.712EU ES E14a_E16a0.00
891483.97RPL23'protein_coding'411AELoss-5.031EU E4a_E5a0
901503.96C9orf156'protein_coding'413AELoss-4.931EU ER6b0
911513.96WDR39'protein_coding'17AEGain5.701AB E6_Aa0
921523.96THADA'protein_coding'1357AEGain5.293EU AB CE E36_Aa0
931533.95AC006299.1'protein_coding'14AEGain6.552EU E2a_E3a100.00
941543.95PLEKHG1'protein_coding'321AELoss-6.034CE I3_SR50
951553.93EIF2C4'protein_coding'219AEGain5.651AB E19_Aa0
961563.93FN1'protein_coding'1050DELoss-15.273EU FN10.00
971613.92ENOPH1'protein_coding'16AEGain5.651ES E2a_E4a0
981623.92DHRS12'protein_coding'210AELoss-6.752EU E2a_E3a100.00
991653.91ELMO2'protein_coding'429AEGain5.651EU E4b_E5a0
1001663.91BTRC'protein_coding'518AEGain5.061EU E8a_E9a0
1011673.90SYT11'protein_coding'14AEGain5.251CE I3_AR20
1021683.89LRRC68'protein_coding'113AELoss-5.351EU E10a_E11a0
1031693.89RBM26'protein_coding'224AEGain5.441CE I12_AR10
1041703.89FAM53C'protein_coding'15AELoss-5.371EU E2a_E3a0
1051713.89ZNF197'protein_coding'513AEGain5.061AB E3_Aa0
1061723.87SNX21'protein_coding'613AELoss-4.892CE I2_AR40
1071733.87JMJD2B'protein_coding'225AEGain5.441CE I14_AR10
1081753.86IGFBP3'protein_coding'310DELoss-14.521EU IGFBP30
1091783.85SYMPK'protein_coding'227AEGain9.532EU AB E2_Aa0
1101793.85INO80D'protein_coding'213AEGain5.651EU E8a_E9a0
1111803.85SAFB2'protein_coding'224AEGain4.621EU ER7a0
1121813.84MANEA'protein_coding'27AEGain5.431EU E2a_E3a0
1131833.84ATP11A'protein_coding'331AEGain5.061AB E29_Da0
1141843.84HN1'protein_coding'512AEGain4.461EU ER2a0
1151853.84MTCH2'protein_coding'113AEGain5.081I10_SR20
1161863.83PRKAR1B'protein_coding'416AELoss-4.501EU ER14b0
1171883.83SCP2'protein_coding'521AELoss-6.7514EU ES AB E11a_E13a50.00
1181893.83THAP7'protein_coding'26AEGain5.061AB E3_Aa0
1191903.82PTOV1'protein_coding'214AEGain10.298EU AB E10_Aa0.00
1201913.82ARHGEF7'protein_coding'833AELoss-4.801EU E17a_E18a0
1211923.82HECW2'protein_coding'231AEGain5.657EU AB CE E27_Da0
1221943.81DCN'protein_coding'610DELoss-14.011EU DCN0
1231953.81WDHD1'protein_coding'226AELoss-6.752EU E21a_E22a100.00
1241963.80FKBP11'protein_coding'16AEGain5.651AB E6_Aa0
1251973.80TCEA1P2'protein_coding'210AELoss-5.262EU ER6a0.00
1261983.80LYPLA2'protein_coding'719AEGain5.153EU ER8e0.00
1272003.79GTF2H4'protein_coding'216AELoss-4.483EU ER1a0.00
1282013.78NUTF2'protein_coding'15AEGain8.472EU CE I4_AR20
1292023.78KAT2A'protein_coding'118AELoss-4.243EU I11_SR30.00
1302043.77BTF3L4'protein_coding'411AELoss-4.801AB E6_Da0
1312053.77SLC12A3'protein_coding'126AELoss-4.502EU CE I25_AR60
1322063.75PDLIM3'protein_coding'39AELoss-10.191EU E3a_E4a0
1332073.75VPRBP'protein_coding'333AEGain5.434ES AB IR E27a_E29a0
1342083.74EIF1AX'protein_coding'29AELoss-5.103EU E2a_E3a0.00
1352093.73RNASET2'protein_coding'419AEGain4.421EU ER6a0
1362103.71RERE'protein_coding'427AEGain10.291AB E23_Aa0
1372113.71CCDC134'protein_coding'29AEGain8.551EU E2a_E3a0
1382123.71APBB1'protein_coding'418AELoss-10.781EU E14a_E15a0
1392133.70TMEM41A'protein_coding'28AELoss-8.481ES E2a_E5a0
1402143.69FUS'protein_coding'319AELoss-4.701EU E4a_E5a0
1412173.68ALKBH6'protein_coding'310AEGain13.771AB E7_Aa0
1422183.68PLTP'protein_coding'318DELoss-12.781EU PLTP0
1432193.67HERC2'protein_coding'193AELoss-9.052EU E62a_E63a0.00
1442233.66PTMA'protein_coding'725AEGain5.283EU ENST0000041006450.00
1452243.65SFRS12'protein_coding'316AEGain7.972EU AB E4_Da0
1462253.64STX17'protein_coding'18AEGain5.061AB E6_Aa0
1472263.64TTLL3'protein_coding'830AEGain7.1622EU ES E10a_E11a57.14
1482283.62SPAG7'protein_coding'17AELoss-8.491EU E3a_E4a0
1492293.62TTC27'protein_coding'120AEGain4.551EU E11a_E12a0
1502303.61ITPKB'protein_coding'210AELoss-7.573EU CE E1a_E2a0
1512313.61XRN1'protein_coding'243AEGain4.521EU E28a_E29a0
1522323.61LIPT1'protein_coding'57AELoss-4.751EU ER6a0
1532333.60KIAA0467'protein_coding'782AELoss-3.925EU E13a_E14a0.00
1542343.60MICAL1'protein_coding'536AEGain11.754EU AB E8_Da0.00
1552353.59ZNF318'protein_coding'311AEGain7.971EU E1a_E2a0
1562363.58TERF1'protein_coding'312AELoss-8.481EU E6a_E7a0
1572373.57TIMM44'protein_coding'113AELoss-4.141EU E6a_E7a0
1582383.57CIAPIN1'protein_coding'314AELoss-4.721EU E2a_E3a0
1592393.57FBLN5'protein_coding'314DELoss-11.858EU FBLN542.86
1602403.56DAGLB'protein_coding'115AEGain9.131EU E1a_E2a0
1612413.56CASP7'protein_coding'919AEGain4.861EU ER8b0
1622423.56DGKD'protein_coding'232AEGain5.122EU AB E12_Da0
1632433.55MTIF2'protein_coding'422AELoss-7.452EU ER17b0.00
1642443.55SNED1'protein_coding'538AELoss-3.7510EU AB ER29a20.00
1652453.55RPE'protein_coding'310AELoss-7.331EU E1a_E2a0
1662463.55CAMK1D'protein_coding'213AELoss-8.281EU E7a_E8a0
1672473.54DCTN1'protein_coding'1050AEGain4.351EU ER24b0
1682483.54TBC1D22B'protein_coding'214AELoss-3.941EU E2a_E3a0
1692493.53FIP1L1'protein_coding'318AELoss-8.712EU ES E1a_E3a0.00
1702503.53TMEM39A'protein_coding'19AEGain5.061AB E3_Aa0
1712513.53WBP1'protein_coding'310AEGain11.072EU AB E2_Aa0
1722523.53SPIB'protein_coding'16AEGain9.482EU ES E1a_E3a100.00
1732553.52ILF3'protein_coding'424AEGain10.292ES AB E5a_E7a0
1742573.51IFT88'protein_coding'531AELoss-7.331EU E24a_E25a0
1752593.51TCF7'protein_coding'1021AEGain4.531EU ER12a0
1762603.51KATNA1'protein_coding'313AELoss-4.972EU E7a_E8a0.00
1772613.50RCC1'protein_coding'620AEGain5.127EU ER3b83.33
1782623.50OSBPL9'protein_coding'835AELoss-4.981EU E6a_E7a0
1792633.50THBS2'protein_coding'224DELoss-11.352EU THBS20.00
1802643.49TSC22D3'protein_coding'813AEGain8.746IR ENST000003723900
1812653.48CNTROB'protein_coding'322AELoss-4.482EU E5a_E6a0.00
1822663.48XYLT1'protein_coding'112AELoss-4.022EU I3_SR50
1832683.48HMGB3'protein_coding'15AELoss-4.721EU E1a_E2a0
1842713.48COL1A2'protein_coding'254DELoss-11.133EU COL1A250.00
1852723.47CLSTN1'protein_coding'319AELoss-3.372EU ER11a100.00
1862733.47C22orf40'protein_coding'412AELoss-3.971EU ER3b0
1872743.47MMS19'protein_coding'537AEGain8.761AB E8_Aa0
1882753.46LGALS8'protein_coding'825AEGain4.151EU ER11a0
1892763.45COG1'protein_coding'114AEGain6.831AB E13_Da0
1902773.45TMEM108'protein_coding'311AELoss-4.002EU CE ER6a0
1912783.45DYM'protein_coding'117AELoss-4.821EU E1a_E2a0
1922793.44IKBKAP'protein_coding'137AEGain4.521EU E18a_E19a0
1932803.44IL17RB'protein_coding'111AELoss-2.182EU I10_SR20
1942823.43ATG2A'protein_coding'346AELoss-4.193EU E39a_E40a0.00
1952833.43AC135457.2'protein_coding'16AEGain7.391EU E2a_E3a0
1962853.43FBN1'protein_coding'267DELoss-10.8012EU FBN118.18
1972863.43ETAA1'protein_coding'16AEGain8.361EU E5a_E6a0
1982873.43ATXN3'protein_coding'514AELoss-7.911EU E3a_E4a0
1992883.43NFKB2'protein_coding'327AEGain4.231CE I13_AR10
2002893.43IGHA1'IG_C_gene'13DELoss-6.694EU IGHA1100.00
2012903.43HEXDC'protein_coding'214AEGain10.023EU AB CE I7_AR20
2022923.42ZDHHC8'protein_coding'313AEGain9.131AB E5_Aa0
2032933.42GMDS'protein_coding'213AEGain7.252EU E10a_E11a100.00
2042953.42CCDC34'protein_coding'311AEGain7.991EU ER1g0
2052963.42TTK'protein_coding'224AEGain8.551EU E8a_E9a0
2062973.41PQLC3'protein_coding'29AEGain3.981EU E2a_E3a0
2072993.40FAM176B'protein_coding'13AEGain6.811AB E1_Da0
2083013.40CYP2R1'protein_coding'15AELoss-3.742EU I1_SR10
2093023.39ZNF587'protein_coding'13AELoss-3.521I2_SR20
2103033.39DMAP1'protein_coding'518AEGain9.712AB E6_Aa0
2113043.39EP400'protein_coding'555AELoss-6.751EU E49a_E50a0
2123053.39CCDC80'protein_coding'18DELoss-10.501EU CCDC800
2133073.39CD97'protein_coding'422AEGain3.811CE I5_AR40
2143083.39RPS11'protein_coding'15AELoss-3.511EU E3a_E4a0
2153103.38C10orf84'protein_coding'416AELoss-4.511I9_SR60
2163123.37UBXN11'protein_coding'826AELoss-4.452EU CE I1_AR10
2173133.37ZNF800'protein_coding'310AELoss-4.733IR I5_SR10
2183163.37PAQR3'protein_coding'418AELoss-3.985AB IR CE E8_Da0
2193173.36RAP2C'protein_coding'28AEGain7.371EU E3a_E4a0
2203183.36SPAG5'protein_coding'124AELoss-4.082EU E2a_E3a0.00
2213193.36BCL2L1'protein_coding'48AEGain4.391AB E2_Ab0
2223203.35SCFD2'protein_coding'210AELoss-9.051EU E2a_E3a0
2233213.35CST3'protein_coding'38DELoss-6.403EU AB CST3100.00
2243223.34MAN1B1'protein_coding'319AELoss-3.343EU AB E13_Da0.00
2253233.34SHC1'protein_coding'720AEGain3.573EU AB E2_Aa0.00
2263253.34ATG7'protein_coding'219AELoss-9.372EU E3a_E4a0.00
2273263.34HSH2D'protein_coding'311AELoss-3.503EU AB IR Ix0
2283273.33STK19'protein_coding'412AEGain7.451EU ER1a0
2293283.33BFAR'protein_coding'18AEGain6.811ES E2a_E4a0
2303293.33TTL'protein_coding'17AELoss-6.751EU E4a_E5a0
2313303.32ERC1'protein_coding'523AEGain3.711ES E18a_E20a0
2323313.32KIAA1632'protein_coding'246AELoss-8.483EU E20a_E21a0.00
2333323.32SECISBP2'protein_coding'325AELoss-3.933EU E6b_E7a50.00
2343333.32MTX1'protein_coding'29AELoss-4.292EU CE E3a_E4a0
2353343.32TAF5L'protein_coding'49AEGain6.601EU ER5b0
2363373.31AB019441.1'IG_V_gene'12DELoss-9.941EU AB019441.10
2373383.31TRPV1'protein_coding'623AEGain7.993EU ER11b50.00
2383403.31SNX14'protein_coding'533AELoss-4.143EU E16a_E17a50.00
2393413.30ATAD2'protein_coding'128AELoss-4.381EU E3a_E4a0
2403433.30SLC12A9'protein_coding'215AELoss-4.141EU E4a_E5a0
2413443.30BPHL'protein_coding'313AELoss-3.881EU ER1b0
2423453.30PPID'protein_coding'110AEGain3.902EU E1a_E2a0.00
2433463.29TBC1D4'protein_coding'221AELoss-3.511CE I12_AR10
2443483.28WDR33'protein_coding'426AEGain6.232EU AB E7_Ab0
2453493.28PHF11'protein_coding'314AEGain9.131ES E1a_E4a0
2463503.28GBGT1'protein_coding'413AELoss-7.901EU E2a_E3a0
2473523.27NARF'protein_coding'416AEGain6.833EU AB E12_Aa0.00
2483533.26BUB1B'protein_coding'123AEGain7.391EU E1a_E2a0
2493553.26RSRC2'protein_coding'413AELoss-4.041ES ENST000003317380
2503563.26ATXN2'protein_coding'530AELoss-3.592EU E24a_E25a0.00
2513573.26CKAP2L'protein_coding'19AEGain7.391EU E2a_E3a0


Candidate Differential and Alternative Expression Genes (Gain ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1146.31TGOLN2'protein_coding'715AEGain9.453EU ER4b100.00
2215.83PLSCR3'protein_coding'313AEGain9.531CE I7_AR20
3375.45CTNND1'protein_coding'725AEGain7.882EU AB ER22a0
4395.26EPHX1'protein_coding'211AEGain5.682EU AB E9_Da0
5405.22AKAP9'protein_coding'760AEGain9.134EU E35a_E36a0.00
6515.05EIF2AK4'protein_coding'239AEGain9.665EU IR CE E1a_E2a0.00
7604.89MTAP'protein_coding'312AEGain6.752EU ER1c0.00
8654.78HDGF'protein_coding'513AEGain5.422EU ES E1a_E3a100.00
9704.75CRELD2'protein_coding'415AEGain8.551AB E10_Aa0
10714.75GMPPA'protein_coding'624AEGain7.993EU ER12c0.00
11724.73FCGR2B'protein_coding'817AEGain5.742CE I8_AR20
12734.72FKBP15'protein_coding'128AEGain7.182EU I14_SR10
13754.68PPP1R11'protein_coding'69AEGain6.242EU ES ER3c0.00
14824.56CD84'protein_coding'613AEGain6.411EU ER4b0
15874.47SYNE2'protein_coding'7123AEGain6.7615EU AB E116_Aa0.00
16894.45MIA3'protein_coding'844AEGain5.651AB E19_Da0
17914.44DDX31'protein_coding'525AEGain7.394EU E12a_E13a0.00
18924.43ENO2'protein_coding'112AEGain6.231AB E2_Aa0
19934.42DNAJC11'protein_coding'421AEGain5.653EU AB E6_Aa100.00
20944.39SLC38A2'protein_coding'218AEGain6.274EU CE I5_AR100.00
21974.37PTPN4'protein_coding'127AEGain7.391EU E16a_E17a0
22984.36ORC3L'protein_coding'223AEGain6.952EU E16a_E17a0.00
231004.33FMR1'protein_coding'627AEGain5.191CE I15_AR20
241064.28SCAPER'protein_coding'235AEGain5.651EU E10a_E11a0
251084.27MBP'protein_coding'1329AEGain12.039EU AB CE ER11a33.33
261104.24RANGRF'protein_coding'313AEGain9.562EU ER1a100.00
271124.22NPEPPS'protein_coding'123AEGain6.822EU AB E22_Aa0
281134.21KIF18A'protein_coding'117AEGain10.872EU E3a_E4a100.00
291144.21AC104564.11'protein_coding'12AEGain5.651AB E2_Aa0
301154.20GLUD1'protein_coding'214AEGain5.403EU E6a_E7a0.00
311184.18BRWD3'protein_coding'141AEGain6.891EU E39a_E40a0
321204.17LSG1'protein_coding'114AEGain5.041CE I10_AR30
331214.17GAK'protein_coding'433AEGain5.331CE I6_AR10
341224.16MFF'protein_coding'919AEGain5.812ES CE I4_AR50
351234.12PRKCBP1'protein_coding'732AEGain6.232AB E24_Aa0
361264.10KIAA1967'protein_coding'222AEGain4.701I8_SR30
371284.09MKRN2'protein_coding'18AEGain6.531EU E1a_E2a0
381314.08SERPINA9'protein_coding'310DEGain16.891EU SERPINA90
391334.07HDAC4'protein_coding'127AEGain5.653EU E23a_E24a0.00
401354.07WDR44'protein_coding'529AEGain5.972EU ER23a0.00
411394.04FAM38A'protein_coding'347AEGain4.542EU AB E37_Aa0
421404.02INTS1'protein_coding'456AEGain6.241CE I43_AR10
431424.01CTNS'protein_coding'317AEGain5.631AB E12_Aa0
441434.00SMTN'protein_coding'734AEGain5.803EU E8a_E9a0.00
451444.00GABPB1'protein_coding'413AEGain6.121AB E1_Da0
461464.00FAM122C'protein_coding'39AEGain11.702EU ER5a0.00
471473.99SLTM'protein_coding'323AEGain9.712EU ES E14a_E16a0.00
481513.96WDR39'protein_coding'17AEGain5.701AB E6_Aa0
491523.96THADA'protein_coding'1357AEGain5.293EU AB CE E36_Aa0
501533.95AC006299.1'protein_coding'14AEGain6.552EU E2a_E3a100.00
511553.93EIF2C4'protein_coding'219AEGain5.651AB E19_Aa0
521613.92ENOPH1'protein_coding'16AEGain5.651ES E2a_E4a0
531653.91ELMO2'protein_coding'429AEGain5.651EU E4b_E5a0
541663.91BTRC'protein_coding'518AEGain5.061EU E8a_E9a0
551673.90SYT11'protein_coding'14AEGain5.251CE I3_AR20
561693.89RBM26'protein_coding'224AEGain5.441CE I12_AR10
571713.89ZNF197'protein_coding'513AEGain5.061AB E3_Aa0
581733.87JMJD2B'protein_coding'225AEGain5.441CE I14_AR10
591783.85SYMPK'protein_coding'227AEGain9.532EU AB E2_Aa0
601793.85INO80D'protein_coding'213AEGain5.651EU E8a_E9a0
611803.85SAFB2'protein_coding'224AEGain4.621EU ER7a0
621813.84MANEA'protein_coding'27AEGain5.431EU E2a_E3a0
631823.84RGS8'protein_coding'511DEGain14.320N/ARGS8N/A
641833.84ATP11A'protein_coding'331AEGain5.061AB E29_Da0
651843.84HN1'protein_coding'512AEGain4.461EU ER2a0
661853.84MTCH2'protein_coding'113AEGain5.081I10_SR20
671893.83THAP7'protein_coding'26AEGain5.061AB E3_Aa0
681903.82PTOV1'protein_coding'214AEGain10.298EU AB E10_Aa0.00
691923.82HECW2'protein_coding'231AEGain5.657EU AB CE E27_Da0
701963.80FKBP11'protein_coding'16AEGain5.651AB E6_Aa0
711983.80LYPLA2'protein_coding'719AEGain5.153EU ER8e0.00
722013.78NUTF2'protein_coding'15AEGain8.472EU CE I4_AR20
732073.75VPRBP'protein_coding'333AEGain5.434ES AB IR E27a_E29a0
742093.73RNASET2'protein_coding'419AEGain4.421EU ER6a0
752103.71RERE'protein_coding'427AEGain10.291AB E23_Aa0
762113.71CCDC134'protein_coding'29AEGain8.551EU E2a_E3a0
772173.68ALKBH6'protein_coding'310AEGain13.771AB E7_Aa0
782233.66PTMA'protein_coding'725AEGain5.283EU ENST0000041006450.00
792243.65SFRS12'protein_coding'316AEGain7.972EU AB E4_Da0
802253.64STX17'protein_coding'18AEGain5.061AB E6_Aa0
812263.64TTLL3'protein_coding'830AEGain7.1622EU ES E10a_E11a57.14
822293.62TTC27'protein_coding'120AEGain4.551EU E11a_E12a0
832313.61XRN1'protein_coding'243AEGain4.521EU E28a_E29a0
842343.60MICAL1'protein_coding'536AEGain11.754EU AB E8_Da0.00
852353.59ZNF318'protein_coding'311AEGain7.971EU E1a_E2a0
862403.56DAGLB'protein_coding'115AEGain9.131EU E1a_E2a0
872413.56CASP7'protein_coding'919AEGain4.861EU ER8b0
882423.56DGKD'protein_coding'232AEGain5.122EU AB E12_Da0
892473.54DCTN1'protein_coding'1050AEGain4.351EU ER24b0
902503.53TMEM39A'protein_coding'19AEGain5.061AB E3_Aa0
912513.53WBP1'protein_coding'310AEGain11.072EU AB E2_Aa0
922523.53SPIB'protein_coding'16AEGain9.482EU ES E1a_E3a100.00
932533.52RNase_MRP'misc_RNA'11DEGain11.500N/ARNase_MRPN/A
942553.52ILF3'protein_coding'424AEGain10.292ES AB E5a_E7a0
952593.51TCF7'protein_coding'1021AEGain4.531EU ER12a0
962613.50RCC1'protein_coding'620AEGain5.127EU ER3b83.33
972643.49TSC22D3'protein_coding'813AEGain8.746IR ENST000003723900
982693.48FKBP1A'protein_coding'512AEGain3.850N/AENST00000381719N/A
992743.47MMS19'protein_coding'537AEGain8.761AB E8_Aa0
1002753.46LGALS8'protein_coding'825AEGain4.151EU ER11a0
1012763.45COG1'protein_coding'114AEGain6.831AB E13_Da0
1022793.44IKBKAP'protein_coding'137AEGain4.521EU E18a_E19a0
1032833.43AC135457.2'protein_coding'16AEGain7.391EU E2a_E3a0
1042863.43ETAA1'protein_coding'16AEGain8.361EU E5a_E6a0
1052883.43NFKB2'protein_coding'327AEGain4.231CE I13_AR10
1062903.43HEXDC'protein_coding'214AEGain10.023EU AB CE I7_AR20
1072923.42ZDHHC8'protein_coding'313AEGain9.131AB E5_Aa0
1082933.42GMDS'protein_coding'213AEGain7.252EU E10a_E11a100.00
1092953.42CCDC34'protein_coding'311AEGain7.991EU ER1g0
1102963.42TTK'protein_coding'224AEGain8.551EU E8a_E9a0
1112973.41PQLC3'protein_coding'29AEGain3.981EU E2a_E3a0
1122993.40FAM176B'protein_coding'13AEGain6.811AB E1_Da0
1133033.39DMAP1'protein_coding'518AEGain9.712AB E6_Aa0
1143073.39CD97'protein_coding'422AEGain3.811CE I5_AR40
1153093.38SNORD35'snoRNA'11DEGain10.440N/ASNORD35N/A
1163113.38UBA1'protein_coding'430AEGain4.470N/AENST00000377271N/A
1173173.36RAP2C'protein_coding'28AEGain7.371EU E3a_E4a0
1183193.36BCL2L1'protein_coding'48AEGain4.391AB E2_Ab0
1193233.34SHC1'protein_coding'720AEGain3.573EU AB E2_Aa0.00
1203243.34RAB25'protein_coding'15DEGain10.130N/ARAB25N/A
1213273.33STK19'protein_coding'412AEGain7.451EU ER1a0
1223283.33BFAR'protein_coding'18AEGain6.811ES E2a_E4a0
1233303.32ERC1'protein_coding'523AEGain3.711ES E18a_E20a0
1243343.32TAF5L'protein_coding'49AEGain6.601EU ER5b0
1253383.31TRPV1'protein_coding'623AEGain7.993EU ER11b50.00
1263453.30PPID'protein_coding'110AEGain3.902EU E1a_E2a0.00
1273473.29AC020743.7'protein_coding'14DEGain9.750N/AAC020743.7N/A
1283483.28WDR33'protein_coding'426AEGain6.232EU AB E7_Ab0
1293493.28PHF11'protein_coding'314AEGain9.131ES E1a_E4a0
1303523.27NARF'protein_coding'416AEGain6.833EU AB E12_Aa0.00
1313533.26BUB1B'protein_coding'123AEGain7.391EU E1a_E2a0
1323573.26CKAP2L'protein_coding'19AEGain7.391EU E2a_E3a0
1333583.25GYS1'protein_coding'218AEGain4.111CE I8_AR20
1343593.25HAPLN3'protein_coding'15AEGain3.981EU E1a_E2a0
1353663.24ARHGEF1'protein_coding'639AEGain9.824EU ER15c33.33
1363683.23CAMK1'protein_coding'214AEGain7.395EU AB E10_Aa0
1373703.22CCL21'protein_coding'26DEGain9.341EU CCL210
1383723.22C16orf34'protein_coding'39AEGain6.412EU E1a_E2a100.00
1393733.22NNT'protein_coding'224AEGain3.961AB E23_Da0
1403743.22TUBGCP3'protein_coding'223AEGain4.411EU E15a_E16a0
1413753.22TMEM132B'protein_coding'19DEGain9.291EU TMEM132B0
1423763.21GLT8D1'protein_coding'627AEGain3.711ES E1b_E4a0
1433843.19GLE1'protein_coding'217AEGain3.781EU E1a_E2a0
1443883.19BTN3A3'protein_coding'413AEGain6.452EU AB E4_Aa0
1453903.18NDUFB8'protein_coding'38AEGain7.602EU AB E5_Aa0
1463913.18UCHL5'protein_coding'927AEGain4.361EU ER13b0
1473943.18C19orf61'protein_coding'218AEGain4.192EU ER12a0.00
1483963.17C12orf30'protein_coding'124AEGain9.131EU E7a_E8a0
1493973.17ID2'protein_coding'39AEGain3.812EU AB ENST000003311290
1504003.16YTHDC1'protein_coding'217AEGain3.431AB E14_Aa0
1514063.16SENP7'protein_coding'729AEGain8.001EU E15a_E16a0
1524093.15NFKBIA'protein_coding'16AEGain3.372IR I2_AR10
1534103.15OGFR'protein_coding'516AEGain4.173EU AB ER2c100.00
1544133.14B4GALT5'protein_coding'19AEGain3.981EU E2a_E3a0
1554163.14NBPF12'protein_coding'18AEGain8.131EU ER3a0
1564173.14hsa-mir-1248'miRNA'11DEGain8.810N/Ahsa-mir-1248N/A
1574223.13NME3'protein_coding'15AEGain9.921AB E2_Da0
1584243.12PPM1A'protein_coding'410AEGain6.452EU AB E5_Db0
1594253.12RBM4B'protein_coding'14AEGain6.231AB E3_Da0
1604283.12DNM1L'protein_coding'523AEGain6.771EU ER18a0
1614323.11TARBP1'protein_coding'130AEGain7.393EU AB E24_Aa0.00
1624343.11IL4R'protein_coding'416AEGain3.201ES E10a_E13a0
1634363.11SNORD14'snoRNA'11DEGain8.610N/ASNORD14N/A
1644453.09RP5-1077B9.4'protein_coding'110AEGain7.601AB E6_Da0
1654493.08SLC4A2'protein_coding'224AEGain5.741CE I21_AR10
1664513.08DOCK11'protein_coding'254AEGain3.642EU E7a_E8a0.00
1674583.07HNRNPK'protein_coding'828AEGain3.830N/AENST00000376256N/A
1684593.07FOSB'protein_coding'14DEGain8.374IR CE FOSB0
1694623.06SIRT5'protein_coding'413AEGain7.491EU E3a_E4a0
1704633.06GLMN'protein_coding'221AEGain7.391EU E6a_E7a0
1714643.06PSIP1'protein_coding'523AEGain3.821EU ER11a0
1724713.04WRN'protein_coding'135AEGain3.711EU E34a_E35a0
1734733.04NCDN'protein_coding'412AEGain6.811AB E1_Da0
1744743.04KAT5'protein_coding'315AEGain3.401AB E12_Aa0
1754783.03TOMM40L'protein_coding'212AEGain3.711EU E9a_E10a0
1764793.03CELSR3'protein_coding'878AEGain7.976EU CE E54a_E55a25.00
1774803.02CD47'protein_coding'519AEGain5.901AB E7_Da0
1784813.02STAT2'protein_coding'124AEGain6.851AB E7_Aa0
1794823.02FAM76A'protein_coding'513AEGain7.971EU E6a_E7a0
1804833.02PDXDC1'protein_coding'426AEGain3.962EU AB E17_Da0
1814883.02WHSC1L1'protein_coding'225AEGain3.471EU E18a_E19a0
1824943.01ZKSCAN4'protein_coding'28AEGain7.141EU ER1c0
1835003.01FBXO10'protein_coding'111AEGain6.421CE I7_AR20
1845013.01PLK4'protein_coding'116AEGain6.792EU E4a_E5a0.00
1855023.01GCN1L1'protein_coding'158AEGain3.822EU E27a_E28a0.00
1865043.00C2orf34'protein_coding'417AEGain6.231ES E3a_E7a0
1875063.00PPAT'protein_coding'111AEGain6.231EU E10a_E11a0
1885073.00INPP5D'protein_coding'128AEGain3.342CE I15_AR30
1895082.99DPH1'protein_coding'113AEGain5.561CE I6_AR60
1905202.98H3F3A'protein_coding'411AEGain7.392EU AB E5_Aa0
1915222.98ZNF665'protein_coding'25AEGain5.651EU E3a_E4a0
1925242.97TP53BP1'protein_coding'432AEGain3.211AB E29_Aa0
1935252.97AQP3'protein_coding'311AEGain3.572EU E3a_E4a0.00
1945282.97EBAG9'protein_coding'311AEGain3.601CE I7_AR20
1955292.96SLC37A4'protein_coding'211AEGain5.652ES AB E3_Aa0
1965322.96ABCC5'protein_coding'737AEGain7.391EU E21b_E22a0
1975342.96ARSA'protein_coding'514AEGain8.762EU AB E2_Da0
1985352.96UTP14C'protein_coding'26AEGain3.821EU ER1a0
1995362.96HP1BP3'protein_coding'625AEGain6.234EU E5a_E6a33.33
2005372.95FLYWCH1'protein_coding'314AEGain5.731EU ER8a0
2015382.95MRPS5'protein_coding'213AEGain5.653EU ES E6a_E8a0.00
2025432.95C6orf150'protein_coding'411AEGain4.183EU ER1b100.00
2035442.95KIAA0323'protein_coding'18AEGain3.561AB E2_Da0
2045452.95ANKRD26'protein_coding'339AEGain5.631EU E4a_E5a0
2055472.94HNRPA2B1'protein_coding'519AEGain3.002EU ER12c100.00
2065482.94NBPF14'protein_coding'427AEGain7.153EU ER15a0.00
2075542.93HIVEP3'protein_coding'313AEGain3.182EU ER9a0.00
2085562.93CASC5'protein_coding'330AEGain7.972EU E20a_E21a0.00
2095582.93ANKRD41'protein_coding'516AEGain6.771AB E5_Da0
2105592.93GFM2'protein_coding'221AEGain6.412EU E4a_E5a0.00
2115602.92DDX50'protein_coding'115AEGain3.471EU E13a_E14a0
2125632.91CLN3'protein_coding'1124AEGain5.061EU E7a_E8a0
2135652.91SLC27A3'protein_coding'416AEGain5.061AB E8_Aa0
2145662.91PCNT'protein_coding'249AEGain6.164EU AB E19a_E20a0.00
2155672.91ZNF572'protein_coding'13AEGain5.651EU E2a_E3a0
2165732.90SIGLEC5'protein_coding'19AEGain5.651AB E4_Da0
2175742.90ODF2'protein_coding'831AEGain6.233EU AB E23a_E24a0.00
2185762.90EXOSC10'protein_coding'225AEGain5.271EU E24a_E25a0
2195792.89SH3TC1'protein_coding'322AEGain6.231AB E8_Da0
2205812.89RPS23'protein_coding'14AEGain6.721EU E2a_E3a0
2215832.89EWSR1'protein_coding'727AEGain5.192EU ES ENST000003333950.00
2225842.89GRIPAP1'protein_coding'731AEGain6.812EU ES E5a_E7a0.00
2235852.89DIS3L2'protein_coding'632AEGain6.811EU E20a_E21a0
2245862.89DHX16'protein_coding'222AEGain5.891EU ER10a0
2255872.88PHKA2'protein_coding'133AEGain7.974EU AB E29_Da0.00
2265912.88AC091654.4'protein_coding'126AEGain5.801EU E19a_E20a0
2275922.87ZNF410'protein_coding'314AEGain5.802EU ES E9a_E11a0.00
2286002.87TMEM116'protein_coding'214AEGain7.922EU ER2a0.00
2296012.87USP21'protein_coding'629AEGain5.113EU AB E11_Aa0.00
2306082.86STXBP2'protein_coding'226AEGain4.004EU ER10a0.00
2316112.86RASSF4'protein_coding'515AEGain5.893EU AB CE E3_Ab0
2326152.85FAM48A'protein_coding'330AEGain5.804EU ES E25a_E26a33.33
2336162.85ZNF276'protein_coding'111AEGain6.211AB E11_Aa0
2346172.85KRIT1'protein_coding'523AEGain5.882EU ER1b0.00
2356182.85KIAA1432'protein_coding'331AEGain5.502EU E23a_E24a0.00
2366192.85PIGF'protein_coding'27AEGain6.212AB E6_Aa0
2376212.84CARKD'protein_coding'213AEGain7.392EU AB E10_Da0
2386272.84ATXN7L2'protein_coding'213AEGain7.971EU E7a_E8b0
2396282.84MAP2K2'protein_coding'214AEGain3.360N/AENST00000394867N/A
2406292.83GGPS1'protein_coding'35AEGain3.141EU ENST000002828410
2416312.83ASB13'protein_coding'311AEGain6.091EU ER7b0
2426322.83ZNF655'protein_coding'47AEGain6.063EU AB E6_Aa0
2436332.83C9orf85'protein_coding'410AEGain6.231EU E5a_E6a0
2446342.83GON4L'protein_coding'438AEGain6.294EU ER17b0.00
2456362.83HMGB1'protein_coding'718AEGain3.315EU AB ENST000003994890.00
2466372.83ARHGAP11A'protein_coding'112AEGain5.061EU E8a_E9a0
2476392.82DIABLO'protein_coding'37AEGain5.652EU ES E2a_E3a0.00
2486422.81PMF1'protein_coding'615AEGain5.311CE I5_AR20
2496432.81NAPRT1'protein_coding'215AEGain6.001EU ER11d0
2506462.81ULK2'protein_coding'335AEGain2.951EU ER24a0
2516482.81AL645939.6'protein_coding'16AEGain6.231AB E4_Aa0


Candidate Differential and Alternative Expression Genes (Loss ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
117.92AC116654.4'IG_V_gene'12DELoss-241.480N/AAC116654.4N/A
227.53IGHV@'IG_V_gene'12DELoss-185.110N/AIGHV@N/A
336.99AC110080.2'IG_V_gene'12DELoss-126.720N/AAC110080.2N/A
446.95SC-9C5.12'protein_coding'35AELoss-54.072EU ER2b100.00
556.79D87023.1'IG_J_gene'11DELoss-110.900N/AD87023.1N/A
666.73IGLV3-25'IG_V_gene'12DELoss-105.930N/AIGLV3-25N/A
776.67AB019438.1'IG_V_gene'12DELoss-102.130N/AAB019438.1N/A
886.63D87016.2'IG_V_gene'12DELoss-98.920N/AD87016.2N/A
996.57AB019440.1'IG_V_gene'12DELoss-94.970N/AAB019440.1N/A
10106.52IGLV3-21'IG_V_gene'12DELoss-91.520N/AIGLV3-21N/A
11116.50IGHA2'IG_C_gene'25AELoss-8.952EU CE I3_AR10
12126.40RPL18A'protein_coding'15AELoss-64.562EU ER1a0.00
13136.35IGLV3-1'IG_V_gene'12DELoss-81.460N/AIGLV3-1N/A
14156.31AB019441.1'IG_V_gene'12DELoss-79.370N/AAB019441.1N/A
15166.24AC006548.22'pseudogene'12DELoss-75.730N/AAC006548.22N/A
16176.07AB019439.1'IG_V_gene'12DELoss-67.170N/AAB019439.1N/A
17185.90AB019439.1'IG_V_gene'12DELoss-59.870N/AAB019439.1N/A
18195.88AB019440.1'IG_V_gene'12DELoss-58.920N/AAB019440.1N/A
19205.87AC096579.1'IG_C_gene'11DELoss-58.540N/AAC096579.1N/A
20225.77AC096579.1'IG_J_gene'11DELoss-54.410N/AAC096579.1N/A
21235.75IGKV1-5'IG_V_gene'12DELoss-53.761EU IGKV1-50
22245.74TMEM55B'protein_coding'29AELoss-9.002EU AB ER7b0
23255.68PLA2G2A'protein_coding'28DELoss-51.130N/APLA2G2AN/A
24265.67AB019440.1'IG_V_gene'12DELoss-50.940N/AAB019440.1N/A
25275.64IGLV4-69'IG_V_gene'12DELoss-49.910N/AIGLV4-69N/A
26285.62AB019439.1'IG_V_gene'12DELoss-49.310N/AAB019439.1N/A
27295.62AC096579.1'IG_J_gene'11DELoss-49.030N/AAC096579.1N/A
28305.59PI16'protein_coding'17DELoss-48.030N/API16N/A
29315.58AB019440.1'IG_V_gene'12DELoss-47.690N/AAB019440.1N/A
30325.55IGLV6-57'IG_V_gene'12DELoss-46.940N/AIGLV6-57N/A
31335.55IGLV2-23'IG_V_gene'12DELoss-46.800N/AIGLV2-23N/A
32345.53IGLV3-19'IG_V_gene'12DELoss-46.230N/AIGLV3-19N/A
33355.51IGHG4'IG_C_gene'29DELoss-45.534EU CE IGHG40.00
34365.47IGLV1-44'IG_V_gene'12DELoss-44.390N/AIGLV1-44N/A
35385.38AB019440.1'IG_V_gene'12DELoss-41.610N/AAB019440.1N/A
36415.19AC096579.1'IG_J_gene'11DELoss-36.390N/AAC096579.1N/A
37425.18VSIG6'protein_coding'12DELoss-36.290N/AVSIG6N/A
38435.18WDR42A'protein_coding'418AELoss-7.873EU AB IR E2a_E3a0
39445.17RPL14'protein_coding'28AELoss-7.791EU E4a_E5a0
40455.15AC096579.1'IG_J_gene'11DELoss-35.480N/AAC096579.1N/A
41465.13AB019437.1'IG_V_gene'12DELoss-35.110N/AAB019437.1N/A
42475.10AB019440.1'IG_V_gene'12DELoss-34.340N/AAB019440.1N/A
43485.09IGHG2'IG_C_gene'28DELoss-34.000N/AIGHG2N/A
44495.07IGLV2-11'IG_V_gene'12DELoss-33.490N/AIGLV2-11N/A
45505.05AC096767.3'IG_V_gene'12DELoss-33.180N/AAC096767.3N/A
46525.01ZWINT'protein_coding'520AELoss-6.432EU ER8f100.00
47535.01AB019439.1'IG_V_gene'12DELoss-32.200N/AAB019439.1N/A
48545.00RAD51AP1'protein_coding'310AELoss-6.752EU E3a_E4a0.00
49554.96SFRP4'protein_coding'16DELoss-31.160N/ASFRP4N/A
50564.96JARID1B'protein_coding'330AELoss-9.042EU E3a_E4a0.00
51574.95AC096579.1'IG_J_gene'11DELoss-30.850N/AAC096579.1N/A
52584.92IGL@'IG_V_gene'12DELoss-30.250N/AIGL@N/A
53594.90AC110080.2'IG_V_gene'12DELoss-29.961EU AC110080.20
54614.85C7orf20'protein_coding'211AELoss-7.501EU ER9b0
55624.84COQ7'protein_coding'16AELoss-9.051EU E5a_E6a0
56634.83RNASE1'protein_coding'34DELoss-28.510N/ARNASE1N/A
57644.81NMNAT1'protein_coding'38AELoss-6.751EU E3a_E4a0
58664.77C14orf103'protein_coding'242AELoss-9.051EU E27a_E28a0
59674.77C10orf28'protein_coding'414AELoss-8.461EU E1a_E2a0
60684.77EIF2S2'protein_coding'19AELoss-8.481EU E2a_E3a0
61694.76MFAP5'protein_coding'210DELoss-27.130N/AMFAP5N/A
62744.72IGKV4-1'IG_V_gene'12DELoss-26.300N/AIGKV4-1N/A
63764.67AB019440.1'IG_V_gene'12DELoss-25.520N/AAB019440.1N/A
64774.66AUTS2'protein_coding'321AELoss-5.892EU ER6a0.00
65784.66AB019441.1'IG_V_gene'12DELoss-25.260N/AAB019441.1N/A
66794.65COMP'protein_coding'119DELoss-25.170N/ACOMPN/A
67804.63AB019439.1'IG_V_gene'12DELoss-24.810N/AAB019439.1N/A
68814.59AB019440.1'IG_V_gene'12DELoss-24.140N/AAB019440.1N/A
69834.51AB019440.1'IG_V_gene'12DELoss-22.800N/AAB019440.1N/A
70844.51RPL9'protein_coding'18AELoss-5.031EU E7a_E8a0
71854.50TMEM149'protein_coding'25AELoss-5.562EU ES E2a_E4a100.00
72864.48AC116654.4'IG_V_gene'12DELoss-22.390N/AAC116654.4N/A
73884.46RWDD3'protein_coding'27AELoss-5.651CE I1_AR50
74904.45NUDT2'protein_coding'612AELoss-5.472EU ER6c0.00
75954.38ZNF83'protein_coding'27AELoss-4.461ES E3a_E5a0
76964.37DTNB'protein_coding'1226AELoss-5.733EU AB E12a_E13a0.00
77994.33AB019438.1'IG_V_gene'12DELoss-20.090N/AAB019438.1N/A
781014.31DUS1L'protein_coding'219AELoss-4.192EU E13a_E14b100.00
791024.30RAP1B'protein_coding'210AELoss-5.703EU E5a_E6a0.00
801034.30BCL2L12'protein_coding'28AELoss-6.071AB E1_Ab0
811044.29IGLV5-45'IG_V_gene'12DELoss-19.600N/AIGLV5-45N/A
821054.28CTGF'protein_coding'15DELoss-19.452EU CTGF0.00
831074.27FAM149B1'protein_coding'217AELoss-6.751EU E2a_E3a0
841094.25IGLV1-36'IG_V_gene'12DELoss-19.080N/AIGLV1-36N/A
851114.22AC106782.5'protein_coding'128AELoss-4.801AB E13_Da0
861164.18RNF216L'protein_coding'821AELoss-9.002EU ER1d100.00
871174.18TRIM3'protein_coding'420AELoss-6.251EU ER5b0
881194.17ADD3'protein_coding'316AELoss-6.851ES E14a_E16a0
891244.12AC113612.3'IG_V_gene'12DELoss-17.370N/AAC113612.3N/A
901254.10SCG2'protein_coding'12DELoss-17.200N/ASCG2N/A
911274.10D87021.1'IG_V_gene'12DELoss-17.120N/AD87021.1N/A
921294.09FBLN1'protein_coding'627DELoss-17.051ES FBLN10
931304.08AB019439.1'IG_V_gene'12DELoss-16.920N/AAB019439.1N/A
941324.07ZCWPW1'protein_coding'524AELoss-6.051EU ER18b0
951344.07SFRP2'protein_coding'13DELoss-16.780N/ASFRP2N/A
961364.07REV1'protein_coding'226AELoss-5.641CE I18_AR30
971374.05EFEMP1'protein_coding'416DELoss-16.531EU EFEMP10
981384.04FMO5'protein_coding'313AELoss-6.001EU ER8c0
991414.02CCDC106'protein_coding'16AELoss-5.361EU E2a_E3a0
1001454.00UHRF1BP1'protein_coding'224AELoss-8.484EU E11a_E12a100.00
1011483.97RPL23'protein_coding'411AELoss-5.031EU E4a_E5a0
1021493.97SEMA3C'protein_coding'118DELoss-15.700N/ASEMA3CN/A
1031503.96C9orf156'protein_coding'413AELoss-4.931EU ER6b0
1041543.95PLEKHG1'protein_coding'321AELoss-6.034CE I3_SR50
1051563.93FN1'protein_coding'1050DELoss-15.273EU FN10.00
1061573.93AB019438.1'IG_V_gene'12DELoss-15.240N/AAB019438.1N/A
1071583.93IGLV1-40'IG_V_gene'12DELoss-15.230N/AIGLV1-40N/A
1081593.93AC096767.3'IG_V_gene'12DELoss-15.220N/AAC096767.3N/A
1091603.93CD163'protein_coding'219DELoss-15.210N/ACD163N/A
1101623.92DHRS12'protein_coding'210AELoss-6.752EU E2a_E3a100.00
1111633.91CSPG2'protein_coding'415DELoss-15.070N/ACSPG2N/A
1121643.91IGLV7-46'IG_V_gene'12DELoss-15.060N/AIGLV7-46N/A
1131683.89LRRC68'protein_coding'113AELoss-5.351EU E10a_E11a0
1141703.89FAM53C'protein_coding'15AELoss-5.371EU E2a_E3a0
1151723.87SNX21'protein_coding'613AELoss-4.892CE I2_AR40
1161743.87AC136428.3'protein_coding'12DELoss-14.590N/AAC136428.3N/A
1171753.86IGFBP3'protein_coding'310DELoss-14.521EU IGFBP30
1181763.86HTRA3'protein_coding'210DELoss-14.500N/AHTRA3N/A
1191773.85VSIG4'protein_coding'18DELoss-14.450N/AVSIG4N/A
1201863.83PRKAR1B'protein_coding'416AELoss-4.501EU ER14b0
1211873.83AC096767.3'IG_V_gene'12DELoss-14.240N/AAC096767.3N/A
1221883.83SCP2'protein_coding'521AELoss-6.7514EU ES AB E11a_E13a50.00
1231913.82ARHGEF7'protein_coding'833AELoss-4.801EU E17a_E18a0
1241933.82AL928761.2'IG_C_gene'14DELoss-14.130N/AAL928761.2N/A
1251943.81DCN'protein_coding'610DELoss-14.011EU DCN0
1261953.81WDHD1'protein_coding'226AELoss-6.752EU E21a_E22a100.00
1271973.80TCEA1P2'protein_coding'210AELoss-5.262EU ER6a0.00
1281993.79ITGBL1'protein_coding'214DELoss-13.870N/AITGBL1N/A
1292003.79GTF2H4'protein_coding'216AELoss-4.483EU ER1a0.00
1302023.78KAT2A'protein_coding'118AELoss-4.243EU I11_SR30.00
1312033.78IGLV4-60'IG_V_gene'12DELoss-13.690N/AIGLV4-60N/A
1322043.77BTF3L4'protein_coding'411AELoss-4.801AB E6_Da0
1332053.77SLC12A3'protein_coding'126AELoss-4.502EU CE I25_AR60
1342063.75PDLIM3'protein_coding'39AELoss-10.191EU E3a_E4a0
1352083.74EIF1AX'protein_coding'29AELoss-5.103EU E2a_E3a0.00
1362123.71APBB1'protein_coding'418AELoss-10.781EU E14a_E15a0
1372133.70TMEM41A'protein_coding'28AELoss-8.481ES E2a_E5a0
1382143.69FUS'protein_coding'319AELoss-4.701EU E4a_E5a0
1392153.69IGFBP6'protein_coding'14DELoss-12.910N/AIGFBP6N/A
1402163.68AL122127.6'IG_J_gene'11DELoss-12.850N/AAL122127.6N/A
1412183.68PLTP'protein_coding'318DELoss-12.781EU PLTP0
1422193.67HERC2'protein_coding'193AELoss-9.052EU E62a_E63a0.00
1432203.67DPT'protein_coding'14DELoss-12.720N/ADPTN/A
1442213.66IGLV1-41'IG_pseudogene'12DELoss-12.680N/AIGLV1-41N/A
1452223.66AB019439.1'IG_V_gene'12DELoss-12.650N/AAB019439.1N/A
1462273.63AC009958.3'IG_V_gene'12DELoss-12.380N/AAC009958.3N/A
1472283.62SPAG7'protein_coding'17AELoss-8.491EU E3a_E4a0
1482303.61ITPKB'protein_coding'210AELoss-7.573EU CE E1a_E2a0
1492323.61LIPT1'protein_coding'57AELoss-4.751EU ER6a0
1502333.60KIAA0467'protein_coding'782AELoss-3.925EU E13a_E14a0.00
1512363.58TERF1'protein_coding'312AELoss-8.481EU E6a_E7a0
1522373.57TIMM44'protein_coding'113AELoss-4.141EU E6a_E7a0
1532383.57CIAPIN1'protein_coding'314AELoss-4.721EU E2a_E3a0
1542393.57FBLN5'protein_coding'314DELoss-11.858EU FBLN542.86
1552433.55MTIF2'protein_coding'422AELoss-7.452EU ER17b0.00
1562443.55SNED1'protein_coding'538AELoss-3.7510EU AB ER29a20.00
1572453.55RPE'protein_coding'310AELoss-7.331EU E1a_E2a0
1582463.55CAMK1D'protein_coding'213AELoss-8.281EU E7a_E8a0
1592483.54TBC1D22B'protein_coding'214AELoss-3.941EU E2a_E3a0
1602493.53FIP1L1'protein_coding'318AELoss-8.712EU ES E1a_E3a0.00
1612543.52IGLV3-27'IG_V_gene'12DELoss-11.500N/AIGLV3-27N/A
1622563.52D86994.1'miRNA'11DELoss-11.450N/AD86994.1N/A
1632573.51IFT88'protein_coding'531AELoss-7.331EU E24a_E25a0
1642583.51AB019437.1'IG_V_gene'12DELoss-11.410N/AAB019437.1N/A
1652603.51KATNA1'protein_coding'313AELoss-4.972EU E7a_E8a0.00
1662623.50OSBPL9'protein_coding'835AELoss-4.981EU E6a_E7a0
1672633.50THBS2'protein_coding'224DELoss-11.352EU THBS20.00
1682653.48CNTROB'protein_coding'322AELoss-4.482EU E5a_E6a0.00
1692663.48XYLT1'protein_coding'112AELoss-4.022EU I3_SR50
1702673.48AC110080.2'IG_V_gene'12DELoss-11.180N/AAC110080.2N/A
1712683.48HMGB3'protein_coding'15AELoss-4.721EU E1a_E2a0
1722703.48TIMP3'protein_coding'28DELoss-11.130N/ATIMP3N/A
1732713.48COL1A2'protein_coding'254DELoss-11.133EU COL1A250.00
1742723.47CLSTN1'protein_coding'319AELoss-3.372EU ER11a100.00
1752733.47C22orf40'protein_coding'412AELoss-3.971EU ER3b0
1762773.45TMEM108'protein_coding'311AELoss-4.002EU CE ER6a0
1772783.45DYM'protein_coding'117AELoss-4.821EU E1a_E2a0
1782803.44IL17RB'protein_coding'111AELoss-2.182EU I10_SR20
1792813.44AB019438.1'IG_V_gene'12DELoss-10.860N/AAB019438.1N/A
1802823.43ATG2A'protein_coding'346AELoss-4.193EU E39a_E40a0.00
1812843.43AOX1'protein_coding'240DELoss-10.810N/AAOX1N/A
1822853.43FBN1'protein_coding'267DELoss-10.8012EU FBN118.18
1832873.43ATXN3'protein_coding'514AELoss-7.911EU E3a_E4a0
1842893.43IGHA1'IG_C_gene'13DELoss-6.694EU IGHA1100.00
1852913.43AB019437.1'IG_V_gene'12DELoss-10.740N/AAB019437.1N/A
1862943.42LRRC15'protein_coding'12DELoss-10.710N/ALRRC15N/A
1872983.41SVEP1'protein_coding'659DELoss-10.600N/ASVEP1N/A
1883003.40D87017.2'IG_C_gene'11DELoss-10.560N/AD87017.2N/A
1893013.40CYP2R1'protein_coding'15AELoss-3.742EU I1_SR10
1903023.39ZNF587'protein_coding'13AELoss-3.521I2_SR20
1913043.39EP400'protein_coding'555AELoss-6.751EU E49a_E50a0
1923053.39CCDC80'protein_coding'18DELoss-10.501EU CCDC800
1933063.39AL122127.6'IG_J_gene'11DELoss-10.450N/AAL122127.6N/A
1943083.39RPS11'protein_coding'15AELoss-3.511EU E3a_E4a0
1953103.38C10orf84'protein_coding'416AELoss-4.511I9_SR60
1963123.37UBXN11'protein_coding'826AELoss-4.452EU CE I1_AR10
1973133.37ZNF800'protein_coding'310AELoss-4.733IR I5_SR10
1983143.37AC096767.3'IG_V_gene'12DELoss-10.340N/AAC096767.3N/A
1993153.37AC022210.8'pseudogene'13DELoss-10.340N/AAC022210.8N/A
2003163.37PAQR3'protein_coding'418AELoss-3.985AB IR CE E8_Da0
2013183.36SPAG5'protein_coding'124AELoss-4.082EU E2a_E3a0.00
2023203.35SCFD2'protein_coding'210AELoss-9.051EU E2a_E3a0
2033213.35CST3'protein_coding'38DELoss-6.403EU AB CST3100.00
2043223.34MAN1B1'protein_coding'319AELoss-3.343EU AB E13_Da0.00
2053253.34ATG7'protein_coding'219AELoss-9.372EU E3a_E4a0.00
2063263.34HSH2D'protein_coding'311AELoss-3.503EU AB IR Ix0
2073293.33TTL'protein_coding'17AELoss-6.751EU E4a_E5a0
2083313.32KIAA1632'protein_coding'246AELoss-8.483EU E20a_E21a0.00
2093323.32SECISBP2'protein_coding'325AELoss-3.933EU E6b_E7a50.00
2103333.32MTX1'protein_coding'29AELoss-4.292EU CE E3a_E4a0
2113353.32BGN'protein_coding'211DELoss-9.960N/ABGNN/A
2123363.31MMP2'protein_coding'113DELoss-9.950N/AMMP2N/A
2133373.31AB019441.1'IG_V_gene'12DELoss-9.941EU AB019441.10
2143393.31RP1-241P17.3'processed_pseudogene'11DELoss-9.910N/ARP1-241P17.3N/A
2153403.31SNX14'protein_coding'533AELoss-4.143EU E16a_E17a50.00
2163413.30ATAD2'protein_coding'128AELoss-4.381EU E3a_E4a0
2173423.30CLEC3B'protein_coding'13DELoss-9.860N/ACLEC3BN/A
2183433.30SLC12A9'protein_coding'215AELoss-4.141EU E4a_E5a0
2193443.30BPHL'protein_coding'313AELoss-3.881EU ER1b0
2203463.29TBC1D4'protein_coding'221AELoss-3.511CE I12_AR10
2213503.28GBGT1'protein_coding'413AELoss-7.901EU E2a_E3a0
2223513.28SLIT3'protein_coding'237DELoss-9.710N/ASLIT3N/A
2233543.26APOD'protein_coding'15DELoss-9.600N/AAPODN/A
2243553.26RSRC2'protein_coding'413AELoss-4.041ES ENST000003317380
2253563.26ATXN2'protein_coding'530AELoss-3.592EU E24a_E25a0.00
2263603.25FKBP14'protein_coding'14AELoss-6.751EU E2a_E3a0
2273613.25COL12A1'protein_coding'471DELoss-9.5221EU COL12A110.00
2283623.25P2RX1'protein_coding'112AELoss-3.313EU AB I1_SR30
2293633.25EVI5'protein_coding'221AELoss-8.701EU ER12a0
2303643.25H19'protein_coding'16DELoss-9.480N/AH19N/A
2313653.25D87018.1'IG_V_gene'12DELoss-9.480N/AD87018.1N/A
2323673.23AC096579.1'IG_V_gene'12DELoss-9.410N/AAC096579.1N/A
2333693.23IGF2'protein_coding'817DELoss-9.360N/AIGF2N/A
2343713.22RPS21'protein_coding'515AELoss-2.081AB E3_Dd0
2353773.21KIAA1009'protein_coding'331AELoss-7.001EU ER1c0
2363783.20DNAJB2'protein_coding'313AELoss-7.553EU E8a_E9a0.00
2373793.20BAZ2B'protein_coding'539AELoss-3.931EU E6a_E7a0
2383803.20C20orf172'protein_coding'517AELoss-4.001EU ER1a0
2393813.19METTL2A'protein_coding'215AELoss-4.864EU ER5b66.67
2403823.19WISP2'protein_coding'411DELoss-9.150N/AWISP2N/A
2413833.19IGLV2-18'IG_V_gene'12DELoss-9.150N/AIGLV2-18N/A
2423853.19OLFML3'protein_coding'38DELoss-9.130N/AOLFML3N/A
2433863.19POR'protein_coding'218AELoss-4.241EU E15a_E15b0
2443873.19CFD'protein_coding'15DELoss-9.102EU CFD0.00
2453893.19USP24'protein_coding'269AELoss-8.486EU E34a_E35a0.00
2463923.18C11orf30'protein_coding'322AELoss-6.322EU CE I4_AR20
2473933.18C10orf76'protein_coding'431AELoss-7.122EU ER1a0.00
2483953.18USP20'protein_coding'329AELoss-3.433EU E25a_E25b0.00
2493983.17GRAMD1B'protein_coding'119AELoss-3.024EU CE I3_AR10.00
2503993.17IGHG3'IG_C_gene'610DELoss-8.984EU CE IGHG350.00
2514013.16FAM54A'protein_coding'210AELoss-3.871EU ER2a0