Distributions of all expression values and Top 1% of expressed Intergenic features for libraries: FL, DLBCL
Download data matrix file (Intergenic x library): IntergenicExpression_v53.txt.gz
Distribution of log2 expression values for library: FL and data type: Intergenic
Distribution of all expression values for the feature type: Intergenic. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Distribution of log2 expression values for library: DLBCL and data type: Intergenic
Distribution of all expression values for the feature type: Intergenic. Note that unlike in the individual gene pages these log2 expression values were not adjusted by adding 1 before converting to log2 scale. This results in -ve expression values if the average coverage of the feature was less than 1 before conversion to log2 scale. The 95th percentile of Silent Intergenic regions is reported to give an indication of the level of background expression noise. *If you can not see the figure below, click here
Top 1% of expressed Intergenic features
The following table provides a ranked list of the most highly expressed Intergenic features. Each column corresponds to an expression library. Each table cell contains the Gene Name (which links to the ALEXA-Seq gene record), followed by the Feature Name (which links to the feature's coordinates in the UCSC Genome Browser and displays expression data), the log2 expression value 'Exp' for the feature, and the percent expression value '% Exp' ([feature expression/gene expression]*100). For Gene records the percent displayed here represents the percentage of all reads for the library instead. Features that are NOT supported by an EST/mRNA sequence are indicated in bold. For exon junction features the number of exons skipped by the junction is indicated as 'Sn', where n is the number of exons skipped (e.g. S0 means no exons skipped, S1 means one exon skipped, etc.).
| RANK | FL (Gene | Feature | Exp | % Exp) | DLBCL (Gene | Feature | Exp | % Exp) |
| 1 | AC100778.5 SNORD58 | IG27 | 11.22 | NA% | AF347015.1 | IG30 | 11.04 | NA% |
| 2 | AF347015.1 | IG30 | 10.76 | NA% | OR2I1P GABBR1 | IG22 | 10.68 | NA% |
| 3 | SSU_rRNA_5 | IG1 | 10.43 | NA% | U66061.1 U66061.1 | IG28 | 10.33 | NA% |
| 4 | OR2I1P GABBR1 | IG22 | 10.15 | NA% | AC114498.2 AC114498.2 | IG22 | 10.02 | NA% |
| 5 | AC114498.2 AC114498.2 | IG22 | 9.67 | NA% | SSU_rRNA_5 | IG1 | 9.86 | NA% |
| 6 | GPX3 TNIP1 | IG41 | 9.04 | NA% | DTX4 MPEG1 | IG22 | 9.33 | NA% |
| 7 | DTX4 MPEG1 | IG22 | 9.00 | NA% | NSBP1 SH3BGRL | IG43 | 8.60 | NA% |
| 8 | U66061.1 U66061.1 | IG28 | 8.40 | NA% | NFATC3 RBM35B | IG20 | 8.07 | NA% |
| 9 | RPL23A TLCD1 | IG41 | 8.40 | NA% | PCBP2 MAP3K12 | IG6 | 7.93 | NA% |
| 10 | ULK3 SCAMP2 | IG48 | 8.32 | NA% | RPL23A TLCD1 | IG41 | 7.93 | NA% |
| 11 | NEK6 PSMB7 | IG42 | 8.00 | NA% | IAH1 ADAM17 | IG42 | 7.77 | NA% |
| 12 | TPCN1 | IG1 | 7.78 | NA% | C14orf167 AL136419.3 | IG49 | 7.42 | NA% |
| 13 | NFATC3 RBM35B | IG20 | 7.77 | NA% | MPHOSPH8 AL354808.24 | IG48 | 7.33 | NA% |
| 14 | IGHM AL122127.6 | IG19 | 7.69 | NA% | ARIH1 hsa-mir-630 | IG11 | 7.13 | NA% |
| 15 | CIRBP C19orf24 | IG4 | 7.62 | NA% | RPS25 TRAPPC4 | IG23 | 7.02 | NA% |
| 16 | CIITA DEXI | IG28 | 7.52 | NA% | KLHDC7B C22orf41 | IG3 | 6.98 | NA% |
| 17 | RABEP1 NUP88 | IG14 | 7.31 | NA% | RABEP1 NUP88 | IG14 | 6.98 | NA% |
| 18 | PCBP2 MAP3K12 | IG6 | 7.31 | NA% | NOL5A IDH3B | IG46 | 6.93 | NA% |
| 19 | NSBP1 SH3BGRL | IG43 | 7.21 | NA% | APC2 C19orf25 | IG12 | 6.90 | NA% |
| 20 | SLAMF6 CD84 | IG46 | 7.19 | NA% | U66061.1 U66061.1 | IG30 | 6.87 | NA% |
| 21 | MPHOSPH8 AL354808.24 | IG48 | 7.15 | NA% | AD000671.3 TMEM149 | IG40 | 6.83 | NA% |
| 22 | ARIH1 hsa-mir-630 | IG11 | 7.13 | NA% | PXK PDHB | IG25 | 6.82 | NA% |
| 23 | snosnR60_Z15 SNORD79 | IG47 | 7.08 | NA% | PLXNC1 CCDC41 | IG14 | 6.76 | NA% |
| 24 | AL122127.6 IGHJ3P | IG20 | 7.08 | NA% | LGALS8 HEATR1 | IG35 | 6.75 | NA% |
| 25 | C14orf167 AL136419.3 | IG49 | 7.03 | NA% | TPCN1 | IG1 | 6.74 | NA% |
| 26 | NCKAP1L PDE1B | IG34 | 7.02 | NA% | NCKAP1L PDE1B | IG34 | 6.72 | NA% |
| 27 | AC010178.40 | IG51 | 6.99 | NA% | EIF2AK4 SRP14 | IG10 | 6.66 | NA% |
| 28 | PXK PDHB | IG25 | 6.99 | NA% | NOL7 RANBP9 | IG34 | 6.60 | NA% |
| 29 | AL137792.11 PTAFR | IG12 | 6.97 | NA% | FAM36A RP11-11N7.2 | IG2 | 6.49 | NA% |
| 30 | U66061.1 U66061.1 | IG22 | 6.90 | NA% | CEPT1 DENND2D | IG7 | 6.46 | NA% |
| 31 | GSTZ1 TMED8 | IG49 | 6.85 | NA% | IL17RA CECR6 | IG63 | 6.39 | NA% |
| 32 | LGALS8 HEATR1 | IG35 | 6.82 | NA% | AC010178.40 | IG51 | 6.37 | NA% |
| 33 | SNORD81 SNORD47 | IG45 | 6.76 | NA% | PTRH2 TMEM49 | IG15 | 6.36 | NA% |
| 34 | U66061.1 TRBV19 | IG23 | 6.74 | NA% | AC069257.28 PCYT1A | IG8 | 6.36 | NA% |
| 35 | SNORD79 SNORD78 | IG48 | 6.71 | NA% | ZNF710 IDH2 | IG16 | 6.35 | NA% |
| 36 | NOL5A IDH3B | IG46 | 6.70 | NA% | SDF2 SUPT6H | IG37 | 6.33 | NA% |
| 37 | AC069257.28 PCYT1A | IG8 | 6.66 | NA% | ACAA2 SCARNA17 | IG30 | 6.30 | NA% |
| 38 | MYL6 SMARCC2 | IG32 | 6.64 | NA% | EMG1 LPCAT3 | IG44 | 6.30 | NA% |
| 39 | ATF7IP AC008114.25 | IG17 | 6.62 | NA% | MRPL51 NCAPD2 | IG12 | 6.25 | NA% |
| 40 | EIF4EBP2 NODAL | IG22 | 6.61 | NA% | PLP2 PRICKLE3 | IG36 | 6.25 | NA% |
| 41 | IAH1 ADAM17 | IG42 | 6.61 | NA% | SUPT4H1 RNF43 | IG48 | 6.25 | NA% |
| 42 | SAMD4B PAF1 | IG36 | 6.61 | NA% | IFNAR2 IL10RB | IG38 | 6.19 | NA% |
| 43 | KLHDC7B C22orf41 | IG3 | 6.58 | NA% | PTPMT1 KBTBD4 | IG19 | 6.17 | NA% |
| 44 | HLA-DQA1 AL662789.11 | IG12 | 6.57 | NA% | NEK6 PSMB7 | IG42 | 6.15 | NA% |
| 45 | IL17RA CECR6 | IG63 | 6.56 | NA% | PDHA1 MAP3K15 | IG3 | 6.13 | NA% |
| 46 | RPS25 TRAPPC4 | IG23 | 6.55 | NA% | U66061.1 U66061.1 | IG26 | 6.09 | NA% |
| 47 | FAM36A RP11-11N7.2 | IG2 | 6.54 | NA% | TSR2 FGD1 | IG9 | 6.09 | NA% |
| 48 | CHST7 SLC9A7 | IG12 | 6.52 | NA% | LIPA IFIT5 | IG15 | 6.04 | NA% |
| 49 | UBE2L3 YDJC | IG8 | 6.50 | NA% | CIITA DEXI | IG28 | 6.03 | NA% |
| 50 | NSD1 RAB24 | IG15 | 6.46 | NA% | PIAS1 CALML4 | IG27 | 6.02 | NA% |
| 51 | PIAS1 CALML4 | IG27 | 6.46 | NA% | MARK2 RCOR2 | IG3 | 5.98 | NA% |
| 52 | APC2 C19orf25 | IG12 | 6.44 | NA% | U66061.1 U66061.1 | IG29 | 5.97 | NA% |
| 53 | AD000671.3 TMEM149 | IG40 | 6.43 | NA% | ATF7IP AC008114.25 | IG17 | 5.95 | NA% |
| 54 | AL009051.1 U6 | IG23 | 6.39 | NA% | MED28 FAM184B | IG9 | 5.94 | NA% |
| 55 | IMP3 SH3PX3 | IG21 | 6.36 | NA% | IQCK GPRC5B | IG50 | 5.94 | NA% |
| 56 | CNR2 | IG1 | 6.35 | NA% | EXOSC9 CCNA2 | IG29 | 5.93 | NA% |
| 57 | SFT2D2 AL009051.1 | IG22 | 6.34 | NA% | PCYOX1 SNRPG | IG3 | 5.93 | NA% |
| 58 | MARK2 RCOR2 | IG3 | 6.33 | NA% | PDAP1 BUD31 | IG46 | 5.93 | NA% |
| 59 | CEPT1 DENND2D | IG7 | 6.31 | NA% | snosnR60_Z15 SNORD79 | IG47 | 5.93 | NA% |
| 60 | DUSP14 AP1GBP1 | IG18 | 6.30 | NA% | USP14 THOC1 | IG4 | 5.91 | NA% |
| 61 | MFSD4 ELK4 | IG20 | 6.27 | NA% | AC012360.7 TGFBRAP1 | IG16 | 5.91 | NA% |
| 62 | AC012360.7 TGFBRAP1 | IG16 | 6.25 | NA% | AC020659.5 EHD4 | IG8 | 5.90 | NA% |
| 63 | NUDT1 SNX8 | IG22 | 6.21 | NA% | U66061.1 U66061.1 | IG18 | 5.86 | NA% |
| 64 | MRPL51 NCAPD2 | IG12 | 6.20 | NA% | AC032027.7 IMPAD1 | IG50 | 5.81 | NA% |
| 65 | EIF2AK4 SRP14 | IG10 | 6.20 | NA% | RLBP1L1 ASPH | IG21 | 5.79 | NA% |
| 66 | CFLAR AC007283.3 | IG15 | 6.20 | NA% | SAMD4B PAF1 | IG36 | 5.75 | NA% |
| 67 | BSCL2 HNRNPUL2 | IG16 | 6.19 | NA% | CFLAR AC007283.3 | IG15 | 5.75 | NA% |
| 68 | U66061.1 U66061.1 | IG21 | 6.18 | NA% | IGHM AL122127.6 | IG19 | 5.70 | NA% |
| 69 | MED28 FAM184B | IG9 | 6.17 | NA% | U66061.1 U66061.1 | IG22 | 5.65 | NA% |
| 70 | ZNF710 IDH2 | IG16 | 6.15 | NA% | NSD1 RAB24 | IG15 | 5.61 | NA% |
| 71 | AC013414.7 RTN4 | IG31 | 6.12 | NA% | OTUD5 U6 | IG25 | 5.60 | NA% |
| 72 | LNPEP AC008865.3 | IG45 | 6.11 | NA% | RMND5B NOLA2 | IG42 | 5.59 | NA% |
| 73 | TXNDC14 C11orf31 | IG47 | 6.10 | NA% | KIF2A DIMT1L | IG24 | 5.56 | NA% |
| 74 | NPFF ATF7 | IG9 | 6.10 | NA% | U66061.1 U66061.1 | IG21 | 5.55 | NA% |
| 75 | SDF2 SUPT6H | IG37 | 6.10 | NA% | CEBPD | IG1 | 5.55 | NA% |
| 76 | NOL7 RANBP9 | IG34 | 6.03 | NA% | TNRC6C AC021593.15 | IG27 | 5.51 | NA% |
| 77 | PGAM5 5S_rRNA | IG29 | 6.02 | NA% | AC104459.2 GBP2 | IG26 | 5.51 | NA% |
| 78 | TIMM8B SDHD | IG36 | 5.99 | NA% | MFSD4 ELK4 | IG20 | 5.50 | NA% |
| 79 | EMG1 LPCAT3 | IG44 | 5.99 | NA% | CHST7 SLC9A7 | IG12 | 5.46 | NA% |
| 80 | USP14 THOC1 | IG4 | 5.97 | NA% | SSSCA1 FAM89B | IG15 | 5.46 | NA% |
| 81 | C4orf43 MARCH1 | IG17 | 5.96 | NA% | CRELD1 TMEM111 | IG48 | 5.46 | NA% |
| 82 | IFNAR2 IL10RB | IG38 | 5.95 | NA% | BET1L RIC8A | IG4 | 5.45 | NA% |
| 83 | PCYOX1 SNRPG | IG3 | 5.95 | NA% | AC097484.3 PPM1K | IG11 | 5.43 | NA% |
| 84 | MLL TTC36 | IG6 | 5.95 | NA% | TAGLN PCSK7 | IG32 | 5.41 | NA% |
| 85 | MMP24 EIF6 | IG25 | 5.91 | NA% | AC002558.1 CDC27 | IG11 | 5.40 | NA% |
| 86 | LIPA IFIT5 | IG15 | 5.88 | NA% | RPL36 LONP1 | IG13 | 5.40 | NA% |
| 87 | snoR38 ST6GALNAC2 | IG6 | 5.87 | NA% | RAD23A GADD45GIP1 | IG19 | 5.35 | NA% |
| 88 | TRAF4 C17orf63 | IG44 | 5.85 | NA% | MRPL28 TMEM8 | IG23 | 5.34 | NA% |
| 89 | SNORD47 snosnR60_Z15 | IG46 | 5.85 | NA% | ZNF224 ZNF225 | IG33 | 5.33 | NA% |
| 90 | RPL36 LONP1 | IG13 | 5.84 | NA% | MAP2K1IP1 DNAJB14 | IG12 | 5.32 | NA% |
| 91 | RP11-119B16.1 PANK2 | IG25 | 5.83 | NA% | TRIM44 | IG51 | 5.32 | NA% |
| 92 | PTRH2 TMEM49 | IG15 | 5.82 | NA% | MRPS22 COPB2 | IG34 | 5.32 | NA% |
| 93 | SNORA40 SSH1 | IG37 | 5.81 | NA% | LIMK2 PIK3IP1 | IG17 | 5.27 | NA% |
| 94 | U66061.1 U66061.1 | IG20 | 5.79 | NA% | U66061.1 U66061.1 | IG27 | 5.26 | NA% |
| 95 | EXOSC9 CCNA2 | IG29 | 5.79 | NA% | TSPAN11 AC008013.8 | IG13 | 5.18 | NA% |
| 96 | AC002558.1 CDC27 | IG11 | 5.77 | NA% | SFT2D2 AL009051.1 | IG22 | 5.14 | NA% |
| 97 | AC032027.7 IMPAD1 | IG50 | 5.77 | NA% | U66061.1 TRBV19 | IG23 | 5.12 | NA% |
| 98 | LIMK2 PIK3IP1 | IG17 | 5.77 | NA% | RAB14 | IG51 | 5.09 | NA% |
| 99 | ACAA2 SCARNA17 | IG30 | 5.76 | NA% | UBE2Z SNF8 | IG4 | 5.09 | NA% |
| 100 | RMND5B NOLA2 | IG42 | 5.76 | NA% | YIPF4 AL121653.2 | IG39 | 5.03 | NA% |