Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ARMCX3	Gene	0	61.90	178.80	89.19	169.71	113.63	102.08	73.63	59.80	80.52	106.78	105.91	127.42	52.82	98.40	132.18	148.87	130.56	148.91	107.98	60.88	148.68	53.50	93.15	176.80	99.22	98.68	168.31	164.24	117.43
2	479298	Transcript	0	0.00	0.00	1.68	6.09	9.96	0.00	1.68	0.00	0.00	2.65	1.79	2.47	0.87	0.45	0.00	2.11	1.34	0.91	0.00	0.00	2.61	1.50	1.51	1.08	2.14	3.67	0.92	0.82	0.67
3	407856	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	477980	Transcript	0	11.46	4.62	5.69	8.34	2.88	5.47	2.68	5.69	4.06	5.60	2.00	4.44	0.84	8.21	9.00	14.56	17.59	16.68	3.69	2.62	5.48	0.53	2.30	6.27	5.85	1.83	0.26	8.62	1.58
5	341189	Transcript	0	2.92	4.93	11.17	28.79	20.85	0.69	2.74	6.30	1.97	5.30	6.81	3.24	2.45	6.55	7.00	2.55	2.46	10.08	4.05	8.77	5.11	1.24	1.26	4.36	2.74	4.14	1.83	10.95	5.05
6	471229	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	467808	Transcript	0	0.00	0.00	3.41	0.00	0.00	0.00	2.35	6.87	0.00	7.03	0.00	1.63	0.00	0.00	0.00	3.67	7.83	0.00	8.09	0.00	5.86	2.48	4.73	0.00	1.93	3.91	12.52	13.43	1.68
8	491568	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	395122	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	0.00	0.00	3.37	12.19	19.93	0.00	3.36	0.00	0.00	5.29	3.57	4.95	1.73	0.91	0.00	4.22	2.67	1.82	0.00	0.00	3.33	3.00	3.01	2.15	4.29	7.33	1.83	1.63	1.34
11	ER1b	ExonRegion	0	23.01	40.08	54.38	187.37	173.69	42.58	40.85	45.25	5.22	60.22	42.87	42.80	24.83	21.91	25.14	70.52	49.40	58.71	26.65	15.55	80.29	37.26	71.00	15.58	38.94	96.46	58.93	130.95	28.33
12	E1_Ac	KnownBoundary	0	25.89	51.38	28.60	163.49	161.52	59.70	53.21	60.32	4.75	57.32	46.50	34.07	28.82	15.91	18.74	90.04	16.61	50.86	16.18	23.24	86.80	31.31	65.80	17.47	48.91	115.35	91.15	186.56	22.94
13	E1_Ad	KnownBoundary	0	0.00	0.00	4.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.69	0.00	0.00	0.00	0.00	5.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Ae	KnownBoundary	0	34.68	59.14	80.80	78.30	121.73	67.10	47.83	47.13	14.89	57.80	23.92	34.01	25.00	17.46	9.97	141.52	87.76	33.26	24.28	24.56	109.18	69.23	130.66	34.27	45.05	55.57	68.58	97.14	41.46
15	ER1c	ExonRegion	0	69.39	110.04	129.18	378.43	317.57	118.74	95.75	105.86	14.89	137.88	85.54	88.59	51.64	48.30	36.40	214.48	129.85	132.36	68.45	49.54	209.14	112.22	218.57	51.90	86.65	190.36	137.37	274.25	75.16
16	ER1d	ExonRegion	0	89.31	134.68	157.46	455.82	330.44	135.18	104.82	112.92	17.98	176.14	91.24	104.31	62.79	61.98	46.67	249.70	139.57	148.28	78.45	62.77	242.01	137.61	256.77	58.80	92.43	209.03	148.96	315.68	85.00
17	ER1e	ExonRegion	0	67.49	89.77	190.06	292.40	207.87	83.50	64.56	58.84	18.22	123.32	63.74	83.05	56.01	56.88	31.84	160.27	145.51	112.99	61.03	42.72	149.38	89.65	197.18	72.56	66.67	163.83	99.30	207.78	116.06
18	E1_Af	KnownBoundary	0	7.85	11.92	89.12	52.63	75.45	17.69	27.41	11.20	1.16	13.42	26.48	34.49	24.17	29.05	8.37	16.29	42.52	9.25	32.15	9.92	22.34	4.62	20.04	15.07	24.47	67.76	32.50	63.62	56.98
19	E1_Da	KnownBoundary	0	0.00	0.00	2.54	0.00	0.00	0.00	5.78	0.00	1.55	0.00	1.46	0.00	1.56	1.04	0.00	0.00	4.10	0.00	0.00	4.13	2.05	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00
20	E1a_E1h	KnownJunction	1	5.84	0.00	21.78	57.59	41.71	0.00	2.46	12.59	0.00	5.55	13.03	5.24	4.90	9.93	0.00	3.82	4.41	9.25	8.09	16.13	10.23	2.48	2.51	5.50	4.77	8.28	0.00	20.26	10.10
21	E1a_E1i	KnownJunction	0	24.89	40.82	53.04	69.67	70.30	32.00	20.94	22.79	14.40	25.09	24.71	32.05	23.41	22.13	8.17	25.78	21.00	64.73	0.00	29.69	33.01	27.81	17.19	22.85	29.74	50.55	25.00	48.75	41.60
22	ER1f	ExonRegion	0	22.72	36.63	100.76	97.99	101.37	30.11	28.32	28.44	12.19	23.24	36.18	40.20	33.32	35.92	9.24	24.55	45.73	60.72	22.86	33.73	40.01	21.18	20.61	26.46	37.02	64.91	34.43	74.57	60.87
23	ER1g	ExonRegion	0	2.27	0.00	3.04	8.60	2.58	0.63	5.53	3.42	0.95	3.18	1.26	3.90	0.28	1.37	0.26	4.82	4.35	3.66	1.65	2.38	2.01	2.10	5.08	1.75	1.11	0.94	0.95	5.39	0.00
24	E1_Ag	KnownBoundary	0	10.74	0.00	2.89	0.00	0.00	3.68	10.58	5.08	1.16	5.47	0.00	5.81	0.00	6.00	0.00	10.71	11.59	19.26	8.09	0.00	12.39	0.00	4.88	2.87	3.71	1.93	0.00	4.00	0.00
25	ER1h	ExonRegion	0	9.38	2.62	2.11	0.00	0.00	2.19	10.75	7.95	0.77	9.75	3.64	8.21	0.00	7.89	7.39	13.79	19.67	14.56	6.89	3.54	10.91	0.65	4.14	9.79	6.21	3.83	2.28	10.49	2.16
26	E1_Db	KnownBoundary	0	0.00	3.97	0.00	0.00	0.00	0.00	0.00	2.54	1.40	1.60	0.00	5.54	0.00	5.36	8.57	7.19	19.00	0.00	0.00	0.00	1.64	0.00	0.00	2.33	1.93	0.00	0.00	6.29	1.68
27	E1b_E1h	KnownJunction	0	2.77	0.00	0.95	0.00	0.00	1.42	14.53	0.00	0.00	0.00	1.61	2.53	0.00	0.84	0.00	0.00	0.00	0.00	0.00	3.72	3.69	0.00	0.00	5.20	0.00	8.20	0.00	5.71	0.00
28	E1b_E1i	KnownJunction	0	0.00	0.00	3.41	0.00	0.00	0.00	2.35	6.87	0.00	7.03	0.00	1.63	0.00	0.00	0.00	3.67	7.83	0.00	8.09	0.00	5.86	2.48	4.73	0.00	1.93	3.91	12.52	13.43	1.68
29	ER1i	ExonRegion	0	11.46	4.62	5.69	8.34	2.88	5.47	2.68	5.69	4.06	5.60	2.00	4.44	0.84	8.21	9.00	14.56	17.59	16.68	3.69	2.62	5.48	0.53	2.30	6.27	5.85	1.83	0.26	8.62	1.58
30	E1_Ah	KnownBoundary	0	14.45	4.85	1.22	0.00	0.00	5.64	0.00	6.97	0.00	11.70	0.00	7.50	4.78	11.30	18.14	9.94	22.91	46.23	0.00	7.36	8.78	0.00	1.97	8.31	1.63	0.00	0.00	6.74	3.30
31	E1_Ai	KnownBoundary	0	35.16	21.43	21.95	19.20	0.00	5.56	8.01	12.04	10.99	13.66	1.61	8.67	6.75	20.32	36.28	30.22	14.14	10.02	0.00	29.77	17.17	20.57	2.51	31.04	16.52	9.78	12.67	19.23	4.56
32	ER1j	ExonRegion	0	32.08	18.65	27.57	38.65	19.39	5.30	15.48	21.17	7.74	19.08	9.82	14.14	10.58	23.29	21.00	27.11	24.18	34.80	5.01	29.41	23.43	13.78	3.55	24.43	17.87	13.41	8.83	27.94	10.02
33	ER1k	ExonRegion	0	117.02	117.84	65.53	106.91	34.87	106.02	69.28	127.62	33.73	102.84	63.26	63.85	49.92	85.40	41.19	164.02	98.88	117.70	56.20	62.76	170.88	133.20	69.77	87.46	106.01	122.25	50.66	138.59	61.69
34	E1_Dc	NovelBoundary	0	0.00	0.00	0.00	0.00	7.07	0.00	0.00	0.00	1.40	0.00	0.00	1.54	0.00	0.00	0.00	3.52	0.90	4.62	0.00	4.05	3.85	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
35	E1c_E2a	KnownJunction	0	136.08	161.03	84.49	96.63	25.79	173.08	151.62	116.60	52.41	199.93	106.36	115.36	92.83	138.17	105.04	333.38	185.66	191.23	121.39	85.43	299.46	130.49	162.87	127.17	137.75	214.44	68.68	262.85	99.14
36	E1c_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.73	0.00	0.00	0.00	0.00	1.39	0.00	0.00	0.00	0.00	7.65	1.26	4.62	0.00	0.00	0.00	0.00	4.78	0.00	1.93	0.00	0.00	2.29	0.00
38	ER2a	ExonRegion	0	114.39	130.63	97.98	56.55	44.75	118.57	126.93	100.92	37.99	230.07	142.26	156.80	88.48	134.24	83.54	231.77	206.00	218.79	109.15	55.14	213.58	85.90	230.82	98.34	116.11	221.70	119.20	302.89	139.68
39	E2_Da	NovelBoundary	0	2.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	8.09	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	0.00	1.68
40	E2a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52
41	E2_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.96	0.00	1.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	E2b_E3a	KnownJunction	0	88.07	80.27	92.48	57.59	61.90	74.89	111.05	107.49	17.72	211.35	164.31	190.30	77.16	121.91	93.08	132.19	183.02	191.49	105.20	51.44	114.35	100.44	270.38	74.41	129.19	225.08	166.24	350.78	187.52
43	ER2b	ExonRegion	0	85.74	101.83	107.72	87.75	69.74	81.11	94.74	110.46	20.22	207.90	164.23	186.77	81.84	123.36	106.41	139.19	191.33	185.58	95.04	64.65	108.41	84.73	285.71	79.59	118.63	227.89	205.13	355.35	187.90
44	I2	Intron	0	2.09	0.45	2.61	0.00	0.00	1.61	0.39	0.00	0.44	1.41	0.00	1.44	0.00	1.68	2.15	2.42	2.92	4.20	1.25	0.00	2.23	0.00	0.00	1.26	1.96	1.23	0.36	6.05	1.04
45	I2_AR1	ActiveIntronRegion	0	2.11	0.46	2.63	0.00	0.00	1.62	0.40	0.00	0.44	1.42	0.00	1.45	0.00	1.69	2.16	2.44	2.94	4.24	1.26	0.00	2.25	0.00	0.00	1.27	1.97	1.24	0.36	6.10	1.05
46	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	6.63	1.76	0.00	0.00	0.00	1.60	0.00	0.00	0.00	2.17	0.00	3.06	1.13	4.62	8.09	0.00	1.64	0.00	0.00	2.27	1.44	0.00	0.00	0.00	1.88
47	ER3a	ExonRegion	1	101.17	98.59	175.74	152.54	171.69	96.19	80.89	109.66	35.97	144.68	120.79	161.37	63.38	124.69	62.16	119.69	160.74	185.01	70.50	70.86	136.29	85.69	206.63	97.23	119.56	194.09	201.88	353.17	148.49
48	E3a_E4a	KnownJunction	0	101.57	123.61	268.46	193.04	223.42	84.75	86.28	97.19	40.11	146.40	111.23	140.42	50.19	142.29	87.70	157.43	151.22	201.64	89.02	70.21	143.19	89.21	111.30	115.20	106.53	151.66	114.70	293.04	77.91
49	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.97	4.62	0.00	0.00	0.00	4.57	0.00	0.00	0.00	0.00	0.00	4.22	0.00
50	ER4a	ExonRegion	0	110.20	161.04	246.87	296.07	195.03	95.51	79.14	106.04	26.30	136.26	97.41	129.05	61.15	119.91	78.13	147.12	122.99	214.21	81.54	68.59	139.49	96.74	117.93	104.57	106.97	139.02	87.05	202.66	87.50
51	E4_Da	KnownBoundary	0	135.37	137.96	195.96	420.60	214.13	106.74	85.36	101.47	34.72	187.66	124.58	140.09	62.83	103.29	74.35	136.32	135.78	253.52	89.02	59.87	124.50	88.24	135.14	150.97	131.80	132.86	104.71	247.80	83.09
52	ER4b	ExonRegion	0	121.27	162.51	209.20	238.06	158.88	105.67	82.16	140.69	53.79	155.43	129.16	157.84	65.73	132.14	78.20	150.23	153.96	223.37	82.23	76.69	174.29	109.72	163.21	139.84	161.61	218.04	149.68	304.79	127.03
53	E4_Db	KnownBoundary	0	150.24	195.94	233.85	301.75	166.09	120.59	84.79	196.03	68.18	135.81	153.93	158.31	72.80	135.29	90.69	224.98	159.73	196.11	226.36	91.30	176.29	161.07	185.03	148.40	173.97	183.67	232.73	236.29	120.99
54	ER4c	ExonRegion	0	120.13	140.29	208.32	183.45	146.25	103.67	89.18	141.62	38.76	123.21	143.58	157.12	60.19	126.34	75.97	176.35	151.51	202.73	99.86	84.69	179.10	125.74	166.46	148.43	148.29	170.47	186.94	236.14	125.00
55	E4_Dc	KnownBoundary	0	102.87	83.28	205.50	183.77	112.15	85.37	106.02	119.79	41.08	137.21	82.57	150.54	64.07	126.27	85.71	183.44	175.30	172.22	97.11	111.31	164.05	78.71	192.62	146.85	127.37	169.17	255.30	240.83	154.57
56	ER4d	ExonRegion	0	97.79	293.24	127.29	309.23	196.91	161.49	139.52	82.29	101.63	170.70	186.15	187.29	89.69	150.53	192.27	208.26	191.95	220.63	190.53	98.17	262.85	76.79	143.48	247.21	159.14	124.54	327.36	220.35	171.54
57	E4_Dd	KnownBoundary	1	28.49	268.55	39.24	78.08	107.14	121.43	55.67	51.31	142.06	78.45	99.14	148.58	46.46	107.28	122.58	233.32	186.83	166.45	177.81	90.64	105.09	46.62	70.23	262.35	96.99	156.08	132.59	318.20	136.87
58	ER4e	ExonRegion	0	26.22	174.06	38.85	87.34	62.40	90.81	38.44	30.52	118.50	72.15	74.99	122.55	36.06	82.27	167.40	147.85	116.64	119.55	93.94	47.74	97.16	26.46	50.01	222.42	71.09	70.79	117.48	129.44	120.30
59	ER4f	ExonRegion	0	0.00	9.85	0.56	0.00	0.00	1.37	3.02	0.00	3.93	5.05	0.60	1.24	0.00	3.17	14.00	1.27	0.50	10.92	0.00	1.41	0.00	0.00	0.00	3.23	0.71	0.00	3.66	1.63	0.00
60	IG43	Intergenic	0	1.33	6.00	1.60	1.15	1.91	2.88	1.82	0.46	1.57	3.64	2.98	1.74	0.20	2.26	2.12	4.63	3.39	3.86	3.86	0.95	4.73	0.35	2.02	2.52	1.83	2.34	3.15	4.78	0.79
61	IG43_SR1	SilentIntergenicRegion	0	0.28	7.71	0.00	0.00	9.53	0.00	0.00	0.00	0.34	0.00	1.45	0.00	0.00	0.00	0.00	4.18	0.83	0.00	0.00	0.00	0.19	0.00	0.00	0.00	1.86	1.02	5.73	0.35	0.53
62	IG43_AR1	ActiveIntergenicRegion	0	1.18	6.70	0.42	0.26	1.45	2.69	0.56	0.26	1.03	3.26	1.92	1.96	0.00	1.32	2.27	8.04	2.92	4.10	3.57	0.28	3.48	0.25	0.76	2.10	1.67	2.48	9.48	3.54	0.61
63	IG43_SR2	SilentIntergenicRegion	0	1.76	5.64	2.58	1.55	2.46	2.36	2.06	0.67	0.55	3.76	4.18	1.28	0.18	2.57	1.18	3.70	2.90	5.31	2.78	0.92	4.47	0.25	2.18	2.64	2.58	3.41	1.33	5.76	0.55
64	IG43_AR2	ActiveIntergenicRegion	0	1.14	3.19	2.44	1.00	1.31	4.47	2.04	0.25	0.68	4.18	3.38	1.97	0.00	3.48	3.45	3.65	3.95	3.56	1.71	1.08	4.47	0.53	5.12	2.07	2.01	0.68	2.93	7.38	1.25
65	IG43_AR3	ActiveIntergenicRegion	0	1.68	8.04	3.14	5.29	3.76	4.50	3.26	0.00	4.77	5.44	2.20	0.46	0.00	3.61	0.00	4.91	2.28	3.27	6.96	0.09	10.07	1.11	4.62	3.67	2.15	0.89	0.90	6.29	0.60
66	IG43_SR3	SilentIntergenicRegion	0	0.95	7.15	0.48	0.79	1.36	2.88	1.90	0.41	3.19	3.39	1.89	2.25	0.39	1.71	2.85	4.79	4.09	2.29	6.05	1.29	5.40	0.40	0.92	2.72	0.88	1.83	3.04	3.01	0.99