Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CXorf38	Gene	0	54.95	56.41	58.23	75.16	41.25	64.47	28.19	43.76	31.46	88.61	113.36	43.95	38.24	66.79	50.57	99.76	51.07	49.86	62.63	50.14	51.19	43.60	41.08	54.70	67.31	53.00	77.25	81.33	33.35
2	378426	Transcript	0	5.59	2.50	4.42	7.39	6.82	5.07	2.32	2.63	3.10	6.38	4.47	4.25	2.69	5.43	3.40	14.92	5.69	4.56	7.49	7.03	3.61	2.92	1.66	3.90	2.75	4.61	3.63	6.98	2.76
3	327877	Transcript	0	116.08	59.24	270.58	258.83	326.87	94.65	52.29	86.59	19.15	111.57	114.26	51.11	35.60	81.56	103.85	115.13	29.76	113.28	64.74	94.28	69.83	92.18	51.02	43.67	90.58	71.80	28.97	96.92	20.44
4	378418	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	440784	Transcript	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.58
6	378421	Transcript	0	4.04	6.45	2.71	2.77	0.48	6.40	1.95	4.83	6.13	8.98	2.42	4.86	1.05	8.22	9.37	9.53	16.63	4.64	4.37	5.02	3.16	1.46	0.86	7.51	7.19	5.96	4.11	4.42	3.59
7	ER1a	ExonRegion	0	3.48	0.00	6.03	13.71	16.81	4.12	0.00	0.69	0.98	5.96	5.06	4.48	6.50	3.97	0.00	12.34	3.76	4.09	0.00	3.16	3.57	6.76	4.29	0.00	2.86	8.25	1.83	4.89	3.86
8	E1_Ad	KnownBoundary	1	75.32	11.05	77.14	236.83	336.01	34.68	23.40	18.56	25.15	103.86	81.65	40.12	47.93	33.92	58.80	154.22	35.23	122.14	24.28	42.76	34.41	66.41	73.09	2.93	26.41	117.28	56.26	161.89	49.39
9	ER1b	ExonRegion	1	33.42	2.69	43.10	106.70	110.95	16.62	9.80	9.21	9.35	42.72	35.00	19.96	27.63	18.39	28.77	83.05	18.17	53.09	11.73	23.51	15.43	32.78	40.11	0.68	11.82	57.51	25.14	75.65	23.37
10	ER1c	ExonRegion	1	62.16	13.96	106.04	201.10	204.24	27.49	28.22	18.41	21.35	87.35	72.60	36.80	50.66	38.10	64.41	146.78	32.31	101.66	22.63	44.97	28.17	60.84	83.18	6.99	25.01	109.62	54.95	167.08	55.36
11	ER1d	ExonRegion	0	50.19	17.00	76.29	57.79	61.42	36.26	22.41	20.05	14.77	54.60	34.08	19.65	28.83	32.63	35.55	88.43	22.53	63.45	21.10	33.43	25.44	50.84	40.13	10.04	23.29	65.66	19.57	79.83	29.42
12	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	6.34	7.37	5.84	0.00	2.74	16.90	1.49	3.22	0.00	6.87	0.00	23.94	7.34	14.64	0.00	0.00	2.05	2.14	0.00	5.26	3.49	8.02	0.00	8.85	6.47
13	E1a_E1e	KnownJunction	0	48.01	44.60	15.25	31.49	28.15	88.48	58.93	32.70	33.38	165.73	96.71	50.57	53.31	38.51	59.80	196.14	40.63	143.33	32.37	47.47	34.29	54.06	92.44	27.81	73.31	189.72	29.67	180.27	41.53
14	E1a_E2b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.98	0.00
15	E1a_E2c	NovelJunction	0	6.02	3.49	4.46	0.00	6.93	12.05	10.53	9.01	6.97	18.85	5.98	4.40	12.55	7.98	25.51	25.24	2.95	9.63	24.28	3.47	5.50	0.00	2.12	0.00	14.32	18.11	2.19	23.50	9.31
16	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.58
17	ER1e	ExonRegion	0	4.77	2.76	5.65	4.50	3.52	5.81	1.45	3.56	0.51	6.23	1.95	2.09	0.36	2.31	4.95	11.62	6.21	4.43	3.39	7.32	1.29	2.76	1.64	2.06	1.72	6.28	3.02	10.39	3.00
18	E1_Ae	KnownBoundary	0	8.32	4.07	9.39	8.84	0.00	7.02	5.72	1.99	0.00	5.15	1.30	1.84	0.00	4.25	0.00	6.12	2.36	4.62	0.00	13.73	0.00	0.00	0.00	0.00	6.48	7.08	0.00	8.58	0.00
19	ER1f	ExonRegion	0	94.36	69.11	103.00	114.06	76.21	75.41	44.78	66.94	23.21	122.73	152.92	48.05	48.80	74.26	58.72	127.95	45.41	83.97	62.11	77.59	46.01	68.63	84.54	52.67	77.71	91.20	75.30	132.30	43.01
20	E1_Db	NovelBoundary	0	5.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	0.00	0.00	3.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00
21	E1b_E2a	KnownJunction	0	0.00	0.00	3.89	0.00	0.00	1.53	0.00	8.91	0.00	1.92	0.00	0.00	0.00	6.23	16.14	0.00	3.67	0.00	0.00	12.07	0.00	2.48	0.00	0.00	5.30	5.84	0.00	2.11	0.00
22	E1b_E2b	KnownJunction	0	2.30	0.00	3.46	0.00	0.00	0.00	2.69	2.54	0.00	2.04	0.00	0.00	0.00	4.74	0.00	3.29	0.00	0.00	0.00	6.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E1b_E2c	KnownJunction	0	116.08	59.24	270.58	258.83	326.87	94.65	52.29	86.59	19.15	111.57	114.26	51.11	35.60	81.56	103.85	115.13	29.76	113.28	64.74	94.28	69.83	92.18	51.02	43.67	90.58	71.80	28.97	96.92	20.44
24	E1b_E3a	NovelJunction	0	0.00	0.00	0.00	10.78	0.00	3.38	0.00	0.00	0.00	1.76	3.23	1.36	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	1.64	0.00	0.00	2.99	1.86	2.10	0.00	0.00	0.00
25	I1	Intron	0	1.48	1.53	0.28	0.40	0.00	2.82	0.28	0.87	1.10	2.80	0.85	0.87	0.41	1.34	4.07	1.24	2.77	0.69	1.50	0.53	0.95	0.70	0.15	0.77	0.91	3.35	0.30	2.03	0.52
26	I1_SR1	SilentIntronRegion	0	0.63	0.00	0.00	0.00	0.00	1.51	0.00	0.47	0.00	0.41	0.00	0.97	0.00	0.00	0.00	0.52	1.66	0.51	0.00	0.00	0.00	0.00	0.00	0.04	0.00	3.60	0.00	0.72	0.00
27	I1_AR1	ActiveIntronRegion	0	2.49	0.16	0.24	0.00	0.00	3.36	0.24	1.23	1.28	3.37	1.71	1.22	0.00	2.19	1.72	0.75	4.35	0.39	0.76	0.66	1.61	0.28	0.00	0.35	0.34	2.43	0.76	1.46	0.60
28	I1_SR2	SilentIntronRegion	0	1.21	2.10	0.31	0.56	0.00	2.75	0.32	0.78	1.13	2.80	0.65	0.75	0.58	1.18	5.20	1.46	2.34	0.80	1.89	0.54	0.80	0.89	0.21	0.97	1.18	3.65	0.17	2.33	0.53
29	E2_Aa	NovelBoundary	0	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	3.20	3.67	0.00	1.87	0.00	1.00	25.11	3.82	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	3.86	2.15	0.00	2.20	0.00
30	ER2a	ExonRegion	0	1.87	1.54	1.81	0.00	0.00	4.85	0.96	3.32	2.40	5.22	1.04	0.57	1.44	5.98	9.00	6.84	7.68	14.30	4.68	3.34	2.82	1.76	0.00	3.79	4.75	7.47	1.49	3.69	0.65
31	E2_Da	KnownBoundary	0	0.00	9.70	2.92	0.00	0.00	11.43	2.40	0.00	9.32	3.67	0.00	1.60	1.88	6.47	9.97	9.79	5.18	0.00	8.09	6.45	5.74	2.33	0.00	0.00	0.00	4.25	8.35	7.37	0.00
32	ER2b	ExonRegion	0	4.04	6.45	2.71	2.77	0.48	6.40	1.95	4.83	6.13	8.98	2.42	4.86	1.05	8.22	9.37	9.53	16.63	4.64	4.37	5.02	3.16	1.46	0.86	7.51	7.19	5.96	4.11	4.42	3.59
33	E2_Ab	KnownBoundary	0	11.74	4.85	4.63	8.84	0.00	5.87	2.92	16.37	11.75	14.54	4.65	5.15	0.00	9.84	0.00	18.05	39.89	0.00	0.00	0.00	7.62	0.00	2.46	9.15	12.31	6.27	6.46	10.42	3.96
34	ER2c	ExonRegion	0	17.59	10.00	11.78	6.65	5.66	7.69	3.67	17.83	4.98	16.50	7.49	9.14	4.46	20.37	14.89	16.56	35.24	3.10	8.02	8.50	4.47	2.21	2.10	9.53	9.16	13.61	2.04	9.08	2.87
35	E2_Ac	KnownBoundary	0	10.32	17.16	3.84	0.00	0.00	5.49	0.00	11.99	0.00	12.62	4.14	8.22	4.39	14.27	18.34	6.12	18.46	0.00	8.09	6.78	0.00	0.00	0.00	10.77	3.60	22.32	0.00	6.47	1.29
36	ER2d	ExonRegion	0	157.18	129.35	154.33	198.92	119.43	106.97	71.35	95.84	53.15	160.73	196.88	81.66	74.99	143.21	90.79	155.40	84.71	84.12	109.30	113.61	86.97	112.80	81.80	92.70	136.81	99.37	99.23	158.89	49.32
37	E2_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	8.09	0.00	3.77	0.00	0.00	0.00	0.00	3.86	0.00	4.58	0.00
38	E2b_E3a	KnownJunction	0	197.37	143.78	79.53	205.34	78.55	169.05	104.36	93.51	77.96	212.75	244.47	88.40	101.27	158.93	136.33	178.78	113.63	113.28	113.29	121.98	120.01	106.67	96.09	109.70	153.44	135.44	106.65	152.77	57.05
39	ER3a	ExonRegion	0	166.10	177.87	83.54	147.33	77.08	171.04	82.61	111.85	73.64	217.67	312.69	120.12	128.26	177.69	124.00	214.12	123.55	135.35	166.04	122.13	123.98	127.21	111.65	129.08	184.42	113.78	187.66	180.62	71.75
40	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E3a_E4a	KnownJunction	0	168.05	114.89	109.38	139.12	63.52	130.14	113.97	79.63	85.63	162.86	196.83	123.37	152.09	168.50	88.90	142.82	120.40	78.60	169.94	82.45	105.17	122.61	112.83	97.08	123.05	139.30	109.83	183.10	76.26
42	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	14.44	0.00	0.00	0.00	2.74	3.83	0.00	0.00	0.00	0.00	0.00	3.82	2.25	4.62	0.00	0.00	0.00	2.38	0.00	0.00	1.55	3.52	0.00	0.00	0.00
43	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	3.82	0.00	0.00	0.00	0.00	1.60	0.00	0.00	2.39	1.40	0.00	0.00	0.00	0.00
44	ER4a	ExonRegion	0	143.33	163.08	138.06	239.16	90.06	144.04	81.54	114.16	77.44	236.13	310.94	125.58	145.46	183.99	135.47	211.20	130.88	132.91	187.87	118.17	106.46	133.46	121.78	139.20	191.61	114.89	201.16	206.52	84.21
45	E4_Da	NovelBoundary	0	0.00	0.00	0.97	0.00	0.00	5.49	0.00	0.00	0.00	2.04	0.00	3.04	0.00	0.84	27.31	6.12	1.08	0.00	0.00	3.72	1.76	0.00	0.00	2.93	0.00	0.00	0.00	0.00	0.00
46	E4a_E5a	KnownJunction	0	175.25	172.67	111.17	242.65	114.65	93.92	108.19	151.34	98.76	198.13	298.16	96.32	135.72	215.47	166.83	194.92	125.71	116.61	210.40	118.43	67.87	128.88	142.28	116.58	179.12	147.45	205.90	236.88	86.00
47	I4	Intron	0	4.68	2.58	1.24	2.05	0.32	3.21	0.81	0.86	1.67	4.95	1.75	1.79	0.28	2.94	1.67	8.78	4.89	4.42	3.78	2.64	2.74	0.40	0.07	1.70	1.69	2.16	0.88	4.78	0.67
48	I4_SR1	SilentIntronRegion	0	4.68	2.58	1.24	2.05	0.32	3.22	0.81	0.86	1.67	4.95	1.75	1.79	0.28	2.95	1.67	8.78	4.89	4.42	3.78	2.65	2.74	0.40	0.07	1.71	1.69	2.16	0.88	4.79	0.67
49	E5_Aa	NovelBoundary	0	2.36	3.49	0.00	21.57	0.00	1.96	0.00	2.24	3.11	5.19	9.90	0.00	2.87	4.50	0.00	36.57	9.30	9.25	0.00	7.69	3.93	0.00	0.00	8.02	3.52	0.00	1.89	9.93	0.00
50	ER5a	ExonRegion	0	174.09	179.27	119.49	212.94	83.10	136.64	75.43	132.59	110.26	218.42	276.04	117.26	126.89	194.49	117.47	232.83	122.17	136.08	198.23	115.31	103.90	120.30	115.60	132.78	182.10	106.00	188.50	185.52	89.79
51	E5_Da	KnownBoundary	0	26.43	0.00	6.55	28.47	6.78	7.56	11.21	11.25	5.39	3.75	7.69	5.36	1.21	12.61	0.00	14.61	9.84	13.87	8.09	16.87	6.14	7.05	4.63	10.89	3.86	8.07	0.00	9.35	2.94
52	E5a_E5b	KnownJunction	0	158.97	144.75	139.10	110.22	39.50	151.97	58.13	121.58	95.68	164.38	204.77	82.98	95.02	152.90	88.30	172.89	108.76	89.00	137.57	94.03	118.53	107.59	86.73	129.92	153.85	101.58	144.02	176.90	72.60
53	ER5b	ExonRegion	0	11.79	7.25	2.54	11.36	6.93	10.35	5.13	3.75	10.90	11.29	10.86	10.43	3.92	10.69	8.65	32.42	12.82	9.73	26.58	11.10	9.60	2.17	0.72	13.55	6.43	3.91	9.69	12.64	4.16
54	E5_Ab	KnownBoundary	0	5.25	0.00	4.63	0.00	0.00	6.83	0.00	0.00	10.32	5.79	11.17	6.02	5.38	2.26	8.57	14.92	12.58	0.00	104.98	14.80	6.58	0.00	0.00	11.36	9.05	4.08	2.19	0.00	0.00
55	ER5c	ExonRegion	0	110.02	165.27	118.14	190.68	92.61	178.94	61.29	95.56	78.45	236.18	279.33	89.67	80.84	141.43	100.54	250.02	99.68	101.60	160.01	116.26	148.00	87.00	91.57	119.77	161.55	103.27	177.96	161.42	75.48
56	E5_Db	KnownBoundary	0	56.33	148.24	140.20	198.87	119.52	205.57	39.19	49.87	46.07	206.08	244.60	51.11	50.73	98.91	118.60	204.63	60.87	78.60	121.39	80.63	155.83	59.99	61.46	81.83	110.74	90.63	160.22	83.03	40.57
57	ER5d	ExonRegion	0	48.43	61.62	77.63	57.93	52.20	76.11	33.07	37.91	25.72	104.38	100.43	30.32	20.98	57.73	56.65	116.31	40.68	32.57	61.87	47.66	71.78	36.81	40.36	51.17	68.66	48.74	69.17	67.22	33.86
58	E5_Dc	KnownBoundary	0	92.14	119.25	73.90	37.31	40.53	123.20	57.90	48.62	45.71	196.97	201.16	48.04	34.87	80.34	109.03	238.68	33.36	61.65	145.66	69.38	121.29	95.19	48.02	84.40	142.83	105.05	134.33	68.61	54.24
59	ER5e	ExonRegion	0	67.30	67.78	103.74	106.67	62.05	110.95	37.64	69.68	45.86	137.46	210.88	75.15	49.25	107.13	82.64	166.30	82.42	71.06	87.52	81.41	95.09	60.78	59.56	104.53	109.54	95.74	161.17	145.24	57.69
60	IG13	Intergenic	0	62.78	80.71	96.01	95.45	70.70	87.10	41.56	84.47	69.80	148.75	193.46	94.71	59.11	113.84	115.61	160.31	101.10	89.85	114.29	74.13	72.06	62.40	68.15	116.61	124.62	120.07	119.54	158.03	72.96
61	IG13_AR1	ActiveIntergenicRegion	0	62.87	80.81	96.14	95.57	70.79	87.21	41.61	84.57	69.90	148.95	193.71	94.83	59.19	113.99	115.77	160.52	101.24	89.97	114.43	74.23	72.16	62.48	68.24	116.77	124.78	120.22	119.70	158.24	73.05