Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	UXT	Gene	0	1178.48	241.68	311.00	1180.15	1083.28	407.02	2920.70	1941.52	1005.65	348.27	288.10	442.59	448.77	274.10	2329.37	929.59	397.56	384.41	667.19	1511.38	330.67	975.39	498.44	381.89	698.59	812.11	442.32	579.73	534.87
2	333119	Transcript	0	60.70	38.05	24.42	77.39	100.21	12.58	84.56	76.16	39.77	22.07	31.28	39.79	32.52	21.48	166.99	36.06	13.39	43.89	117.60	59.82	8.89	38.79	35.41	15.88	26.20	41.18	26.31	56.48	37.89
3	376964	Transcript	0	27.32	9.05	6.20	12.21	24.06	18.23	37.72	23.16	12.27	13.49	4.83	14.32	6.03	11.86	42.33	38.68	30.12	14.76	14.27	22.13	5.61	8.95	3.17	9.77	12.21	13.96	4.77	12.31	9.17
4	335890	Transcript	1	0.00	0.00	16.13	68.56	31.76	0.00	0.00	0.00	0.00	0.00	1.19	5.57	0.00	1.81	1.40	5.06	7.01	0.00	0.00	0.00	0.00	0.00	8.14	0.00	0.00	2.75	4.35	13.86	2.85
5	485641	Transcript	1	36.16	0.00	0.00	0.00	0.00	8.79	78.04	107.30	10.57	10.03	1.55	22.14	13.95	7.33	109.43	17.82	6.60	10.02	40.46	64.67	0.00	47.64	11.03	8.31	6.74	0.00	0.00	4.18	11.88
6	460840	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	34.94	34.49	35.01	113.35	153.93	8.66	82.44	37.56	23.37	14.29	15.35	44.53	45.99	18.78	57.69	36.70	14.42	45.03	91.87	19.39	6.85	35.51	49.73	8.82	17.15	25.77	13.55	59.17	49.39
8	ER1b	ExonRegion	0	448.05	117.88	100.83	1036.31	875.90	85.07	882.32	457.64	105.51	140.66	114.69	175.46	161.67	70.10	842.81	579.83	75.16	255.53	455.43	234.01	67.73	355.50	339.44	77.63	147.55	245.76	130.09	419.34	204.09
9	E1_Ac	NovelBoundary	0	0.00	0.00	0.00	0.00	6.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.14	0.00	0.00	0.00
10	E1a_E1d	NovelJunction	0	0.00	0.00	1.49	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1a_E1e	KnownJunction	1	1467.32	196.52	335.80	2804.43	2494.26	264.43	3081.13	1853.78	319.26	425.86	297.93	521.83	436.68	164.87	2990.59	1969.69	471.61	753.76	994.92	882.98	212.54	1096.47	875.41	219.40	409.27	722.12	359.91	1011.45	670.54
12	E1_Ad	NovelBoundary	0	49.72	0.00	16.92	112.38	34.48	10.09	30.21	17.62	15.32	3.99	3.92	3.49	1.37	6.65	43.45	28.99	12.36	0.00	0.00	32.91	5.09	38.75	23.05	2.63	6.25	22.06	15.21	39.18	10.10
13	ER1c	ExonRegion	0	1708.35	438.54	345.04	5722.15	2981.46	331.98	4418.52	2154.98	277.51	451.18	343.35	515.16	365.67	249.44	5799.43	3306.40	338.08	1241.77	1667.77	1569.76	211.82	1370.98	1189.84	309.77	463.82	1122.14	429.49	1081.53	498.62
14	ER1d	ExonRegion	1	0.00	0.00	16.13	68.56	31.76	0.00	0.00	0.00	0.00	0.00	1.19	5.57	0.00	1.81	1.40	5.06	7.01	0.00	0.00	0.00	0.00	0.00	8.14	0.00	0.00	2.75	4.35	13.86	2.85
15	ER1e	ExonRegion	0	19.88	4.19	31.04	113.58	130.98	5.72	78.81	34.77	4.82	9.77	10.83	16.68	13.80	7.60	86.14	35.65	19.30	14.89	27.13	34.80	4.25	14.21	34.33	5.22	7.08	44.42	31.93	68.65	17.01
16	E1_Ae	KnownBoundary	0	52.67	3.78	10.46	9.27	12.67	14.69	20.43	55.69	10.96	12.94	5.85	5.75	6.43	16.44	124.18	17.29	11.91	19.14	56.65	86.50	5.82	40.35	22.95	6.10	13.64	17.51	6.91	13.70	9.97
17	ER1f	ExonRegion	0	1260.97	300.72	455.02	4705.90	2789.57	316.47	3461.04	2080.42	275.14	346.18	276.33	461.11	391.00	226.47	3971.57	2274.10	453.50	661.87	969.64	1292.54	199.57	1019.94	835.26	247.63	375.70	979.88	361.50	713.48	452.34
18	E1_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45
19	E1b_E2a	KnownJunction	0	712.72	122.55	346.72	1034.03	1481.67	162.79	1164.72	1593.01	258.18	144.00	161.02	322.16	351.21	178.49	1458.42	268.28	221.02	205.75	460.82	916.89	122.58	486.32	223.79	247.28	272.47	354.94	302.91	344.80	347.47
20	I1	Intron	0	0.43	0.00	0.68	0.00	2.47	0.83	0.81	0.37	0.40	0.73	0.60	0.31	0.26	0.64	0.47	1.25	0.90	0.58	0.97	1.04	0.14	0.18	0.00	0.00	0.29	0.00	1.11	0.82	3.58
21	I1_SR1	SilentIntronRegion	0	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.31	0.26	1.10	0.00	0.41	0.00	2.17	0.46	0.88	0.00	1.18	0.00	0.03	0.00	0.00	0.13	0.00	0.00	0.20	2.74
22	I1_AR1	ActiveIntronRegion	0	0.98	0.00	0.00	0.00	6.86	0.00	0.00	0.00	1.31	1.03	0.29	0.31	0.00	0.85	0.00	0.09	0.93	0.00	0.00	0.08	0.00	0.81	0.00	0.00	0.54	0.00	0.00	0.55	2.82
23	I1_SR2	SilentIntronRegion	0	0.39	0.00	1.21	0.00	1.78	1.50	1.47	0.67	0.20	0.79	0.87	0.00	0.47	0.65	0.84	1.36	1.09	0.70	1.75	1.37	0.26	0.00	0.00	0.00	0.26	0.00	2.00	1.19	4.27
24	E2_Aa	NovelBoundary	0	6.02	0.00	1.54	0.00	0.00	3.84	0.00	2.09	1.16	3.44	6.14	0.00	0.00	0.00	0.00	6.96	2.48	5.14	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	7.56
25	ER2a	ExonRegion	0	2828.81	493.54	870.84	1166.19	2076.58	582.11	2554.57	3811.89	652.16	495.44	429.19	644.22	685.48	546.93	2974.33	1359.31	537.25	565.90	1203.10	3116.69	385.26	2255.18	455.59	706.84	927.46	755.69	522.88	543.48	756.72
26	E2_Da	KnownBoundary	0	3.01	0.00	0.00	0.00	0.00	3.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.91	9.37	6.12	1.15	0.00	8.09	2.98	1.80	1.94	0.00	2.93	1.93	0.00	0.00	0.00	0.00
27	E2a_E2b	KnownJunction	0	4262.88	1156.23	1326.97	1090.97	2902.77	1547.21	5731.61	7032.62	1709.66	1246.34	858.47	1425.85	1448.76	926.39	8523.90	5066.44	1327.46	1598.31	2654.10	6138.26	1127.26	2671.04	1086.30	1149.47	2361.54	1947.36	713.51	1133.35	1797.75
28	E2a_E2d	KnownJunction	0	36.16	0.00	0.00	0.00	0.00	8.79	78.04	107.30	10.57	10.03	1.55	22.14	13.95	7.33	109.43	17.82	6.60	10.02	40.46	64.67	0.00	47.64	11.03	8.31	6.74	0.00	0.00	4.18	11.88
29	E2a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.46	0.00	0.00	0.00	0.00	0.00	1.39	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER2b	ExonRegion	0	33.46	7.97	9.01	7.21	17.52	12.30	51.69	46.03	11.09	11.80	6.99	12.36	10.78	8.35	64.90	44.92	10.04	14.75	23.36	42.77	7.89	19.48	8.70	8.30	18.22	14.28	6.89	9.70	14.90
31	E2_Ab	KnownBoundary	0	0.00	0.00	1.22	0.00	0.00	3.34	0.00	0.00	0.00	1.52	0.00	4.76	1.21	0.00	0.00	9.56	0.00	0.00	0.00	0.00	2.05	1.85	0.00	0.00	1.40	0.00	0.00	0.00	0.00
32	ER2c	ExonRegion	0	2648.47	811.52	712.45	485.58	1264.57	1267.55	10636.81	4900.49	1349.00	1705.46	1664.22	2205.99	1848.09	1012.47	9545.87	4492.08	2033.18	1472.37	2721.44	3877.64	912.25	1683.27	2385.45	982.59	2235.67	3708.37	2391.22	2724.43	2463.92
33	E2_Db	KnownBoundary	0	32.74	4.56	2.52	0.00	35.66	17.11	13.45	27.12	5.18	8.31	4.40	17.89	3.66	15.62	23.12	34.04	56.63	18.75	8.09	19.27	7.42	4.57	2.51	12.20	7.31	23.13	4.97	31.23	3.24
34	E2b_E2d	KnownJunction	0	2205.58	493.38	183.37	371.85	524.35	779.74	9769.02	3732.49	1232.84	1356.39	1940.88	2265.02	1998.20	962.84	6745.97	1686.11	2229.23	822.47	1456.64	2958.31	522.92	1312.72	3035.01	825.27	1539.09	4597.61	3725.18	3610.15	2765.14
35	E2b_E3a	NovelJunction	0	8.26	0.00	0.00	0.00	13.71	0.00	6.98	0.00	3.11	0.00	0.00	4.49	4.39	0.00	16.74	3.82	1.80	0.00	0.00	4.13	0.00	11.18	0.00	0.00	0.00	4.21	2.44	0.00	1.29
36	ER2d	ExonRegion	0	25.28	13.77	4.76	25.34	51.73	26.91	45.09	17.40	20.89	19.42	5.22	20.91	6.37	15.17	45.96	48.67	60.09	16.41	10.66	13.24	4.71	4.74	0.82	16.83	13.92	20.13	2.61	18.04	6.89
37	E2_Ac	KnownBoundary	0	30.38	9.21	5.61	80.67	59.69	23.44	27.01	17.77	45.80	17.66	7.40	21.45	8.95	19.83	81.12	57.53	55.91	9.25	7.87	16.87	7.30	7.00	0.00	38.28	21.67	14.33	2.14	10.56	6.54
38	ER2e	ExonRegion	1	38.29	20.06	14.22	37.51	37.18	22.72	97.24	46.88	32.87	25.82	16.92	41.60	18.11	26.46	87.57	72.48	66.29	35.41	25.66	35.57	9.92	14.97	14.42	30.42	23.70	36.38	22.23	34.69	18.67
39	E2_Ad	KnownBoundary	0	19.94	18.23	14.00	19.41	18.86	24.90	58.93	35.04	12.79	18.93	5.47	30.09	5.70	26.99	34.08	95.01	70.61	55.48	32.37	20.01	16.81	6.47	0.00	27.40	10.46	21.50	9.14	17.34	6.73
40	ER2f	ExonRegion	0	4446.73	861.08	699.56	1099.77	1658.39	1655.18	10931.77	7965.05	5122.67	1096.30	893.00	1371.13	1555.91	1015.06	7532.56	2175.62	1239.72	1134.08	2103.88	6124.72	1408.79	3719.64	1365.90	1569.03	2987.87	2717.85	1479.69	1748.61	1826.73
41	E2_Dc	KnownBoundary	0	41.76	24.24	9.74	9.49	6.04	29.73	28.78	7.02	14.01	19.05	2.82	17.35	4.43	20.74	9.37	41.31	50.56	5.39	8.09	29.94	5.62	6.86	0.00	5.08	14.06	20.51	16.30	11.86	8.55
42	E2c_E3a	KnownJunction	0	2202.52	820.10	628.60	2705.43	2957.60	827.40	2786.65	4357.10	1478.59	315.09	207.11	697.40	796.75	547.36	2984.01	1112.06	515.71	506.53	1302.44	3311.94	573.22	2176.01	365.43	881.98	656.06	777.43	186.32	303.56	826.36
43	ER2g	ExonRegion	0	23.23	5.41	4.82	4.09	2.93	15.47	16.36	6.06	4.82	9.24	2.29	9.69	0.94	12.06	16.14	22.44	20.23	13.12	8.79	10.37	4.22	2.62	0.00	4.18	4.50	7.47	4.82	9.18	5.72
44	E2_Dd	NovelBoundary	0	10.09	13.77	7.97	0.00	20.34	8.90	18.48	11.00	5.36	10.83	9.33	22.74	0.00	22.29	0.00	39.78	36.62	36.99	0.00	7.28	11.91	4.13	0.00	2.45	8.52	6.95	0.00	20.40	0.00
45	I2	Intron	0	6.52	7.17	2.59	2.35	4.95	8.56	3.84	1.87	5.87	6.80	3.01	7.62	0.73	5.92	11.40	14.67	17.80	12.35	13.24	4.09	4.59	0.91	0.59	8.27	4.86	3.98	0.82	5.98	1.36
46	I2_AR1	ActiveIntronRegion	0	11.65	8.08	9.09	3.00	12.21	10.34	7.58	4.62	3.74	10.86	2.49	5.94	1.09	8.13	10.37	22.53	23.08	9.80	14.69	8.57	2.98	2.26	0.00	6.29	7.77	2.63	0.00	4.08	0.00
47	I2_AR2	ActiveIntronRegion	0	3.85	8.19	3.00	0.00	2.92	9.87	2.41	0.55	4.36	2.81	0.53	4.06	0.19	3.31	7.72	4.04	8.93	9.70	10.99	3.59	3.84	0.00	0.54	4.50	3.63	2.82	0.00	9.02	1.30
48	I2_SR2	SilentIntronRegion	0	5.99	5.66	2.35	2.52	5.15	9.10	5.67	0.65	7.40	10.16	2.09	13.88	1.37	3.15	11.24	13.23	42.63	17.82	21.35	0.97	6.00	0.00	0.00	7.06	4.52	8.71	1.29	5.25	1.65
49	I2_AR3	ActiveIntronRegion	0	3.16	5.06	1.47	1.05	4.29	10.10	3.54	0.00	5.71	5.29	2.45	11.54	0.00	3.39	7.03	9.00	22.93	9.75	12.17	3.52	5.44	0.00	0.27	5.25	2.30	2.59	0.54	3.78	0.98
50	I2_SR3	SilentIntronRegion	0	5.12	2.89	0.67	0.00	4.29	15.18	1.13	4.16	5.02	7.53	2.31	5.69	1.99	8.41	11.10	17.67	13.31	14.42	17.05	4.56	6.32	0.92	0.00	3.95	1.13	0.00	1.61	5.28	0.00
51	I2_AR4	ActiveIntronRegion	0	4.08	3.75	0.19	0.00	0.00	8.15	1.78	4.16	2.51	7.25	0.85	6.80	0.00	7.47	11.73	15.79	8.56	7.34	11.10	0.80	10.26	1.85	0.00	7.38	2.08	0.00	0.00	3.22	0.00
52	I2_SR4	SilentIntronRegion	0	7.31	5.77	3.30	6.44	7.02	5.18	5.06	2.64	5.03	7.52	6.38	8.28	1.51	9.09	14.67	29.39	13.93	12.97	12.62	4.53	4.60	1.62	1.30	10.03	7.70	4.51	2.96	4.39	2.64
53	I2_AR5	ActiveIntronRegion	0	20.02	24.29	2.40	7.72	5.26	6.91	6.52	5.29	17.73	16.07	9.40	8.87	1.39	15.43	35.97	31.83	25.18	19.49	19.51	4.95	5.64	2.59	0.65	30.90	12.83	10.16	0.00	11.71	2.88
54	E3_Aa	NovelBoundary	0	7.61	12.70	4.63	10.14	0.00	10.90	0.00	9.06	15.77	3.20	4.68	6.87	0.00	10.61	18.34	25.02	29.98	4.62	8.09	3.14	6.14	2.43	0.00	11.19	4.81	5.97	0.00	0.00	7.36
55	ER3a	ExonRegion	0	1406.92	462.04	533.55	2514.64	3191.77	523.84	2104.57	2528.84	1156.72	326.83	325.87	637.25	687.42	468.63	2295.81	822.76	611.52	456.50	1056.99	1933.35	363.91	1496.30	345.60	542.63	592.39	512.65	370.34	350.36	730.29
56	E3_Da	NovelBoundary	0	21.18	4.56	6.93	0.00	0.00	8.75	7.61	9.51	1.46	2.00	7.97	3.34	0.00	4.21	33.88	25.47	8.71	4.62	0.00	6.53	5.58	4.86	2.07	14.24	3.79	9.70	0.00	0.00	4.65
57	E3a_E4a	KnownJunction	0	1516.10	301.71	1140.08	4044.66	6034.86	488.80	2077.47	1897.87	2939.28	405.97	404.48	869.26	1074.91	565.08	2826.75	727.96	1153.08	585.38	888.82	1650.43	370.50	1168.57	408.97	574.89	807.03	610.15	556.31	405.91	1267.16
58	I3	Intron	0	4.73	0.89	0.46	0.00	0.00	3.03	2.22	6.60	1.39	0.40	1.64	1.70	0.36	1.87	11.38	6.84	3.29	2.74	3.52	10.21	2.75	2.98	1.00	5.34	5.52	0.87	4.04	0.00	1.47
59	I3_AR1	ActiveIntronRegion	0	4.78	0.90	0.47	0.00	0.00	3.06	2.25	6.67	1.41	0.40	1.66	1.72	0.36	1.89	11.51	6.91	3.33	2.77	3.56	10.32	2.78	3.01	1.01	5.40	5.58	0.88	4.08	0.00	1.49
60	E4_Aa	NovelBoundary	0	2.36	0.00	5.88	0.00	0.00	0.00	5.55	5.08	2.95	0.00	1.61	2.86	0.00	2.06	16.14	18.28	7.72	0.00	0.00	19.35	0.00	0.00	2.51	0.00	1.70	2.19	0.00	0.00	3.63
61	ER4a	ExonRegion	0	3467.86	425.41	1042.86	5282.95	3715.69	1259.26	10428.45	5400.17	4815.34	944.64	586.17	982.77	1213.64	571.23	5993.33	1713.16	724.48	938.38	1275.29	4534.88	1269.44	3161.13	1541.25	1189.16	2504.88	2640.10	1193.01	1842.96	1413.75
62	ER4b	ExonRegion	0	260.43	95.26	79.95	159.05	193.03	55.67	409.20	325.87	216.84	68.94	111.28	110.39	74.37	61.68	841.49	120.84	51.59	125.54	346.23	377.33	38.51	156.84	59.67	94.11	165.09	195.28	125.00	153.22	84.89
63	ER4c	ExonRegion	0	86.45	41.61	13.84	41.44	46.49	16.50	86.68	114.76	56.18	29.84	47.21	35.05	19.05	24.19	276.30	35.43	12.35	42.76	143.32	100.25	10.94	42.06	21.10	22.95	35.26	56.58	39.07	53.79	26.40