Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SURF2	Gene	0	102.71	39.95	46.53	67.83	90.44	55.78	98.32	120.09	76.87	56.91	38.06	57.40	106.46	56.62	131.13	48.00	69.48	71.46	48.33	46.79	50.09	131.98	79.97	61.72	62.99	106.71	44.67	184.58	68.92
2	371964	Transcript	0	108.23	58.79	31.93	52.85	86.93	52.66	110.59	133.48	88.21	65.13	45.20	70.23	133.53	70.55	142.22	52.18	75.91	72.98	42.17	48.70	49.52	140.70	82.45	73.48	80.49	134.50	51.07	215.40	77.99
3	495524	Transcript	0	8.78	3.52	9.18	14.02	6.56	5.33	5.79	8.72	3.30	1.51	0.71	2.03	5.48	5.22	0.05	7.76	3.44	1.31	0.00	6.86	3.50	13.13	4.41	5.64	4.31	9.47	0.28	10.27	2.37
4	486887	Transcript	0	5.19	4.46	10.84	41.41	14.74	3.68	8.70	9.70	7.83	5.91	2.66	5.90	2.83	4.52	26.51	13.92	11.77	4.62	8.09	12.32	7.82	30.34	1.92	10.77	7.08	9.53	0.00	17.30	0.00
5	ER1a	ExonRegion	0	14.92	1.22	3.49	37.10	27.68	3.51	32.03	7.64	6.08	8.40	0.79	5.77	10.58	1.44	15.97	11.72	7.42	7.58	0.34	8.02	3.01	18.43	31.68	0.00	2.38	24.74	7.33	36.04	12.83
6	ER1b	ExonRegion	0	84.60	12.57	60.37	107.70	132.66	43.20	152.69	65.66	67.26	41.89	13.01	36.62	118.99	16.98	108.66	60.85	56.29	85.35	21.74	20.13	38.28	123.70	157.85	15.81	23.27	173.78	42.07	287.19	94.05
7	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.65
8	E1a_E2a	KnownJunction	0	24.95	4.17	20.06	38.39	6.63	3.22	28.26	13.83	20.52	10.55	1.30	12.83	28.02	11.68	25.71	3.82	26.76	9.25	8.09	0.00	3.85	27.71	6.99	13.58	7.16	9.05	4.27	24.85	10.93
9	ER2a	ExonRegion	0	103.47	18.18	10.07	80.76	24.35	47.01	96.49	86.90	56.05	33.89	18.16	27.95	71.18	31.77	97.70	39.55	32.57	60.75	20.15	39.54	43.83	129.94	62.43	36.84	30.68	77.15	18.75	126.76	49.46
10	E2_Ab	KnownBoundary	0	159.67	30.54	13.85	198.01	57.92	175.34	339.28	161.59	230.68	122.51	40.46	80.30	219.95	62.64	423.75	181.61	74.48	183.01	104.75	65.75	186.95	210.08	270.82	67.11	93.27	306.71	58.15	411.30	189.23
11	E2_Da	KnownBoundary	0	14.16	0.00	3.99	10.78	0.00	5.03	12.36	2.29	1.80	5.59	0.00	3.07	11.11	6.60	48.24	14.00	10.76	0.00	0.00	11.50	6.14	22.46	16.89	3.05	5.49	13.86	0.00	8.36	3.50
12	E2a_E3a	KnownJunction	0	88.18	48.28	37.97	51.77	67.50	81.26	315.25	161.39	147.33	111.61	68.27	107.11	237.65	70.99	228.82	67.17	92.96	76.03	72.83	39.53	66.14	104.04	181.88	64.60	76.98	303.88	58.10	664.27	186.59
13	E2a_E4a	NovelJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00
15	E2a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER2b	ExonRegion	0	153.90	47.63	30.58	114.81	60.03	147.43	403.45	195.06	217.91	138.53	62.24	111.94	283.44	79.09	402.96	152.35	93.31	160.88	113.60	56.49	154.26	210.74	303.61	83.03	104.63	394.48	66.48	671.98	223.14
17	ER2c	ExonRegion	0	19.27	4.81	7.89	6.48	9.48	6.56	19.06	15.31	4.40	10.55	2.38	6.44	9.42	8.09	24.86	9.99	16.16	10.22	6.63	12.40	3.23	22.82	8.41	11.38	6.63	8.35	1.49	15.31	3.21
18	E2_Db	KnownBoundary	0	13.57	0.00	10.69	0.00	18.72	1.57	7.55	4.63	3.11	1.40	0.00	1.87	1.82	2.15	0.00	2.75	3.83	4.62	0.00	0.00	0.00	11.86	4.92	5.56	5.76	0.00	2.34	12.31	0.00
19	E2b_E3a	KnownJunction	0	5.19	4.46	10.84	41.41	14.74	3.68	8.70	9.70	7.83	5.91	2.66	5.90	2.83	4.52	26.51	13.92	11.77	4.62	8.09	12.32	7.82	30.34	1.92	10.77	7.08	9.53	0.00	17.30	0.00
20	E2b_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER2d	ExonRegion	0	8.94	2.59	10.27	6.47	5.75	3.75	9.07	7.44	1.94	1.50	0.18	2.40	4.87	4.24	0.11	5.50	3.29	2.62	0.00	5.46	2.91	15.43	3.79	5.71	5.44	5.89	0.56	12.95	1.32
22	E2_Dc	NovelBoundary	0	2.48	0.00	1.27	0.00	0.00	1.73	0.00	2.24	0.00	0.00	0.00	3.64	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	4.09	0.00	2.31	0.00	0.00	0.00	0.00	0.00	0.00
23	E2c_E3a	KnownJunction	0	8.61	4.46	8.10	21.57	7.37	6.91	2.52	10.00	4.66	1.52	1.23	1.66	6.08	6.20	0.00	10.02	3.58	0.00	0.00	8.27	4.09	10.84	5.02	5.56	3.18	13.05	0.00	7.59	3.43
24	I2	Intron	0	4.01	0.00	1.25	0.00	0.00	1.03	0.75	1.15	0.42	1.98	0.59	1.77	0.16	1.75	2.52	1.24	3.35	2.40	0.80	0.00	1.07	0.22	0.23	1.34	0.36	0.39	0.00	0.41	0.42
25	I2_AR1	ActiveIntronRegion	0	5.05	0.00	1.04	0.00	0.00	0.09	0.00	1.07	0.70	2.85	0.30	1.74	0.40	1.82	2.87	0.77	3.87	3.64	0.99	0.00	1.55	0.56	0.00	2.68	0.00	0.98	0.00	0.00	0.00
26	I2_SR1	SilentIntronRegion	0	3.34	0.00	1.40	0.00	0.00	1.67	1.27	1.21	0.24	1.41	0.79	1.80	0.00	1.72	2.30	1.56	3.03	1.58	0.67	0.00	0.75	0.00	0.38	0.45	0.60	0.00	0.00	0.68	0.70
27	E3_Aa	NovelBoundary	0	10.85	0.00	1.22	0.00	0.00	5.06	2.46	2.54	0.00	0.00	0.00	1.54	0.00	0.86	7.97	3.37	4.88	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.00	0.00	0.00	8.94	1.88
28	ER3a	ExonRegion	0	108.43	31.55	77.10	75.94	125.26	59.93	131.37	146.65	79.40	72.01	53.91	86.03	139.66	73.01	155.96	47.62	115.86	78.67	58.31	60.24	43.83	137.23	121.59	59.07	65.90	148.97	82.30	350.19	101.14
29	E3_Da	NovelBoundary	0	3.01	0.00	1.54	0.00	0.00	0.00	0.00	2.49	0.00	0.00	0.00	1.48	0.00	2.28	18.34	0.00	6.93	9.25	0.00	0.00	0.00	0.00	0.00	5.86	1.48	0.00	0.00	0.00	0.00
30	E3a_E4a	KnownJunction	0	122.34	63.70	103.20	31.71	169.33	83.76	92.40	195.78	64.68	60.68	54.85	72.56	135.43	69.51	167.63	75.05	119.23	146.15	48.55	81.05	50.78	162.97	83.08	75.13	97.40	73.13	74.25	96.20	75.83
31	E3a_E5a	NovelJunction	1	2.71	0.00	3.29	0.00	7.37	18.03	2.23	0.00	1.58	6.55	5.50	0.00	12.80	7.71	8.17	3.52	2.48	0.00	16.18	0.00	3.93	2.04	6.06	0.00	1.40	13.39	9.14	121.49	4.89
32	E3a_E6a	NovelJunction	0	0.00	0.00	0.00	8.41	0.00	5.10	4.58	1.99	4.23	0.00	0.00	0.00	0.00	1.06	8.37	0.00	0.00	0.00	0.00	0.00	0.00	2.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	I3_AR1	ActiveIntronRegion	0	1.38	2.08	0.94	0.00	0.00	2.91	0.00	0.00	1.27	0.47	1.44	1.20	0.00	2.28	3.37	0.05	6.13	2.68	0.00	0.00	0.34	0.42	0.58	2.03	2.17	0.00	0.00	0.44	0.00
34	I3_SR1	SilentIntronRegion	0	3.42	2.54	1.57	0.00	0.43	1.43	0.00	0.57	1.07	1.02	0.70	0.55	0.37	1.97	4.97	1.58	3.92	2.45	2.26	0.24	1.34	0.74	0.16	1.63	0.84	0.77	0.41	2.18	0.33
35	I3_AR2	ActiveIntronRegion	0	1.84	1.42	2.39	0.76	0.00	3.03	0.21	0.97	2.18	0.64	0.13	2.66	0.14	1.96	5.53	1.64	4.47	3.30	0.68	0.00	0.91	0.95	0.00	0.91	0.84	0.00	0.00	2.49	0.45
36	I3_SR2	SilentIntronRegion	0	2.38	2.10	1.68	0.00	0.00	3.21	0.00	0.00	2.76	1.16	0.34	1.10	0.37	2.61	2.89	1.96	2.43	2.12	0.92	0.00	0.82	0.52	0.52	0.00	0.60	0.00	0.00	4.44	1.85
37	E4_Aa	NovelBoundary	0	0.00	3.49	0.00	0.00	0.00	0.00	0.00	0.00	2.71	0.00	1.42	1.54	0.00	1.06	18.34	0.00	5.99	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	1.32
38	ER4a	ExonRegion	0	158.56	92.20	98.34	112.13	235.66	79.42	141.45	223.11	94.11	106.95	93.94	99.69	164.97	111.05	176.61	74.77	122.49	96.79	79.29	58.91	72.84	208.20	93.14	121.64	110.67	130.15	89.01	190.19	104.12
39	E4_Da	KnownBoundary	0	134.90	81.15	96.17	175.14	118.49	103.78	158.66	179.90	118.52	96.95	71.68	107.17	134.19	108.70	256.72	92.56	106.42	88.62	89.02	50.03	78.90	144.83	87.66	100.43	79.33	100.46	59.89	176.00	86.63
40	ER4b	ExonRegion	0	162.70	53.55	86.47	88.63	120.28	97.87	102.73	214.34	101.70	97.01	55.46	93.32	139.26	96.46	209.25	63.51	95.86	106.77	79.17	70.81	80.26	175.63	85.90	103.70	117.50	128.08	46.38	113.34	87.86
41	E4_Db	NovelBoundary	0	131.18	60.98	22.85	19.20	118.93	52.22	73.18	118.69	73.09	61.08	33.50	80.33	141.48	92.64	173.21	49.27	87.63	84.38	48.55	39.94	37.14	157.08	56.39	91.04	83.69	89.78	45.87	101.50	58.57
42	E4_Dc	NovelBoundary	0	0.00	0.00	1.25	0.00	0.00	1.96	0.00	2.29	4.90	2.04	2.69	5.12	0.00	3.52	18.34	6.58	11.77	4.62	8.09	3.47	2.05	4.23	2.31	2.63	0.00	0.00	5.07	1.89	0.00
43	E4c_E5a	KnownJunction	0	187.22	94.43	28.83	70.96	133.96	61.39	116.20	213.94	100.65	96.15	73.33	99.82	185.78	111.00	186.36	80.25	109.58	90.29	24.28	60.29	67.51	223.93	105.44	122.14	148.74	187.92	83.19	180.53	86.89
44	ER4c	ExonRegion	0	170.11	85.26	33.41	40.55	115.03	64.55	103.26	205.03	87.58	87.28	59.51	100.24	174.19	121.38	176.16	74.54	104.73	98.37	41.14	60.43	56.73	208.30	83.26	115.67	131.04	162.59	78.26	144.85	84.92
45	I4	Intron	0	0.81	0.00	1.26	0.00	0.00	0.52	0.76	4.87	3.39	3.27	1.80	3.73	4.90	0.69	11.45	3.49	5.08	2.18	7.24	2.08	2.16	6.13	0.00	3.25	0.54	0.00	0.00	3.08	1.01
46	I4_AR1	ActiveIntronRegion	0	0.82	0.00	1.28	0.00	0.00	0.53	0.77	4.94	3.44	3.32	1.83	3.79	4.97	0.70	11.62	3.54	5.14	2.22	7.35	2.11	2.19	6.22	0.00	3.30	0.55	0.00	0.00	3.13	1.03
47	E5_Aa	NovelBoundary	0	7.20	8.53	2.42	0.00	6.63	1.96	5.03	2.34	14.01	1.76	1.20	0.00	4.04	5.10	0.00	0.00	8.62	0.00	0.00	3.89	3.61	6.27	0.00	2.27	3.56	0.00	0.00	5.53	0.00
48	ER5a	ExonRegion	0	165.43	86.95	49.01	66.55	100.74	92.09	116.97	197.96	139.81	94.15	76.31	90.20	166.83	102.81	204.65	74.18	115.70	109.07	97.62	82.02	87.01	214.98	92.51	121.10	128.16	140.43	76.71	278.86	97.92
49	E5_Da	NovelBoundary	0	2.83	0.00	2.34	0.00	0.00	0.00	0.00	2.54	6.46	0.00	0.00	1.54	0.00	0.84	0.00	0.00	5.04	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E5a_E6a	KnownJunction	0	69.48	63.02	16.29	38.82	58.36	26.09	42.22	68.53	55.79	30.52	23.92	38.01	82.25	47.84	76.94	34.81	55.24	74.75	16.18	45.90	25.55	123.97	36.30	42.41	37.20	51.63	27.18	71.67	34.99
51	I5	Intron	0	3.70	2.23	0.41	0.00	0.40	1.47	1.32	0.76	1.94	1.19	1.17	0.10	0.00	1.41	4.08	2.04	3.80	1.11	0.79	1.68	0.23	0.44	0.74	1.06	1.64	0.00	0.45	0.80	0.99
52	I5_AR1	ActiveIntronRegion	0	3.71	2.24	0.41	0.00	0.40	1.47	1.33	0.76	1.94	1.19	1.18	0.10	0.00	1.42	4.09	2.04	3.81	1.11	0.79	1.69	0.24	0.45	0.74	1.06	1.65	0.00	0.45	0.81	0.99
53	E6_Aa	NovelBoundary	0	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.67	0.00	0.00	0.00	1.97	2.13	0.00	3.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00
54	ER6a	ExonRegion	0	62.29	32.36	54.54	64.21	105.27	39.76	48.22	79.84	80.25	27.79	14.27	50.44	77.43	38.41	106.66	22.62	45.77	54.80	42.76	44.70	40.70	91.26	46.08	48.44	38.92	70.30	26.73	131.60	41.81
55	IG13	Intergenic	0	4.31	3.37	3.36	2.62	0.89	5.53	1.11	2.69	2.26	5.28	0.00	2.93	4.26	3.22	4.38	1.81	3.27	3.58	2.92	1.51	2.87	3.95	3.64	1.18	3.40	5.17	6.70	9.83	4.76
56	IG13_SR1	SilentIntergenicRegion	0	4.34	3.39	3.39	2.64	0.90	5.57	1.11	2.71	2.27	5.31	0.00	2.95	4.29	3.25	4.39	1.83	3.30	3.61	2.94	1.52	2.89	3.98	3.66	1.19	3.42	5.21	6.72	9.90	4.80