Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TRAF1	Gene	0	288.25	157.46	330.70	174.73	22.81	191.00	49.87	55.00	226.38	187.03	119.43	146.87	43.67	131.59	255.08	531.04	436.12	483.68	111.25	15.14	235.01	361.11	137.59	237.55	431.30	374.46	64.31	41.59	295.23
2	373887	Transcript	0	407.24	192.69	432.16	218.29	26.77	241.13	66.82	68.56	233.48	245.55	154.02	195.89	51.82	169.54	278.12	742.65	554.73	743.40	111.53	20.04	306.81	491.13	212.10	233.41	479.43	455.62	67.24	53.34	314.19
3	IG16_AR1	ActiveIntergenicRegion	0	3.90	4.18	2.52	13.63	0.00	0.47	2.27	0.31	0.40	2.25	1.38	2.05	0.61	2.58	5.41	6.38	1.29	34.67	3.60	0.00	1.59	2.31	2.03	2.49	1.19	11.29	1.04	0.67	2.84
4	IG16_SR1	SilentIntergenicRegion	0	26.71	2.44	4.17	14.51	3.88	5.33	2.26	2.25	2.91	5.28	0.00	1.40	0.14	3.22	14.60	40.33	9.68	36.68	4.05	0.44	2.51	1.08	0.88	3.08	6.03	7.20	0.01	1.37	1.30
5	ER1a	ExonRegion	0	147.38	28.93	53.19	108.08	19.39	69.01	15.82	17.51	55.74	49.03	15.29	30.08	3.73	40.89	110.10	236.07	218.28	178.66	31.97	4.39	43.84	17.43	9.16	56.98	92.84	71.65	7.32	19.72	13.14
6	E1_Da	NovelBoundary	0	21.41	11.15	52.07	15.96	12.08	28.51	2.23	0.00	11.75	46.50	15.63	13.67	2.80	13.07	0.00	29.30	48.73	55.35	24.28	0.00	26.03	15.22	10.93	8.02	9.66	35.28	6.81	2.29	13.73
7	E1a_E2a	KnownJunction	0	242.73	79.98	85.13	196.06	26.08	121.89	17.05	51.76	119.80	93.99	47.23	63.94	26.34	72.59	228.42	528.61	285.42	395.95	40.46	12.16	50.74	48.47	37.73	127.71	169.23	169.30	5.07	32.67	52.72
8	I1	Intron	0	21.58	19.74	30.74	25.11	1.07	22.28	5.74	3.63	14.86	24.65	12.76	12.69	3.69	10.11	8.65	27.87	16.66	46.24	9.09	0.60	15.92	16.57	10.69	7.53	12.51	20.30	12.03	2.50	6.88
9	I1_AR1	ActiveIntronRegion	0	23.61	21.59	33.63	27.47	1.17	24.38	6.27	3.97	16.25	26.96	13.96	13.88	4.03	11.05	9.47	30.49	18.21	50.59	9.94	0.66	17.42	18.13	11.69	8.24	13.69	22.20	13.16	2.73	7.52
10	E2_Aa	NovelBoundary	0	36.16	27.44	64.78	48.75	0.00	41.13	5.72	9.95	29.42	28.68	47.10	24.31	0.00	25.19	9.97	54.62	52.76	47.01	8.09	0.00	26.27	30.00	4.97	26.32	15.87	30.13	26.09	4.54	37.11
11	ER2a	ExonRegion	0	346.25	145.87	274.27	282.56	25.90	241.10	43.80	54.09	161.08	195.29	116.01	114.93	30.88	118.24	259.43	677.36	376.35	580.90	78.58	10.99	276.22	370.16	132.85	168.68	305.76	310.05	47.35	43.14	188.71
12	E2_Da	NovelBoundary	0	13.74	0.00	1.00	0.00	7.07	8.98	8.75	0.00	0.00	1.96	0.00	1.33	0.00	3.79	9.17	6.12	1.22	88.62	8.09	0.00	3.33	4.91	0.00	2.63	0.00	3.86	0.00	0.00	3.10
13	E2a_E3a	KnownJunction	1	343.53	286.29	271.00	172.77	30.06	511.79	111.17	73.90	282.78	412.76	212.17	176.71	46.33	144.24	209.09	1540.15	535.54	1187.85	193.99	7.03	643.45	362.20	336.57	228.26	678.56	587.07	61.23	32.40	389.13
14	I2	Intron	0	14.26	6.24	1.19	5.46	0.25	10.82	0.31	0.65	2.79	4.77	1.27	0.85	0.79	4.35	15.60	5.08	2.73	78.47	12.33	0.80	10.36	3.66	1.10	7.10	1.96	3.99	1.49	1.57	3.06
15	I2_AR1	ActiveIntronRegion	0	9.73	0.70	0.00	1.56	0.00	2.70	0.00	0.88	0.79	5.06	0.68	0.59	0.45	1.72	8.27	3.54	1.21	48.27	5.93	1.20	6.90	2.39	0.00	2.54	0.58	2.77	0.00	2.09	1.08
16	I2_SR1	SilentIntronRegion	0	15.69	7.96	1.56	6.67	0.32	13.34	0.40	0.59	3.41	4.69	1.45	0.93	0.89	5.16	17.88	5.56	3.20	87.92	14.33	0.68	11.45	4.06	1.44	8.52	2.39	4.38	1.95	1.42	3.67
17	E3_Aa	NovelBoundary	0	49.61	8.34	5.56	28.47	0.00	14.27	0.00	2.04	7.83	20.29	0.00	1.87	2.93	14.16	55.81	14.92	3.35	140.12	16.18	0.00	5.86	9.48	4.33	22.01	10.49	7.90	6.41	1.98	6.67
18	ER3a	ExonRegion	0	416.93	182.09	344.77	225.86	24.57	245.36	76.74	64.42	183.77	256.83	199.25	173.37	44.36	162.97	289.07	790.08	451.23	810.47	117.52	14.44	270.87	443.41	306.66	214.48	487.52	421.39	76.76	43.46	346.20
19	E3_Da	NovelBoundary	0	46.24	0.00	4.14	0.00	0.00	5.68	0.00	4.28	5.66	7.47	0.00	5.06	0.00	8.80	0.00	14.53	9.79	56.25	8.09	0.00	10.67	11.62	0.00	19.32	9.02	7.30	0.00	2.20	6.24
20	E3a_E4a	KnownJunction	0	467.75	155.22	410.57	162.85	36.11	151.13	52.35	52.90	183.60	234.96	118.03	147.11	43.79	171.29	190.35	600.44	404.60	685.05	64.74	32.83	236.77	486.37	207.69	209.47	407.23	311.60	76.14	45.25	239.38
21	I3	Intron	0	25.06	5.89	4.96	7.46	0.91	7.39	1.43	2.66	3.78	5.00	2.77	2.30	0.30	3.73	7.62	10.09	6.55	37.15	9.00	0.60	12.65	4.63	1.17	6.62	7.52	6.59	1.09	0.95	2.48
22	I3_SR1	SilentIntronRegion	0	25.36	5.89	4.79	7.91	0.86	7.66	1.51	2.72	3.68	5.11	2.71	2.34	0.31	3.85	7.68	10.17	6.63	38.45	9.08	0.64	12.86	4.76	1.17	6.74	7.68	6.56	1.15	0.97	2.44
23	I3_AR1	ActiveIntronRegion	0	20.22	5.93	7.79	0.00	1.77	2.99	0.00	1.66	5.57	3.31	3.87	1.67	0.00	1.79	6.57	8.82	5.35	16.20	7.74	0.00	9.37	2.61	1.17	4.81	4.92	7.10	0.00	0.59	3.02
24	E4_Aa	NovelBoundary	0	18.29	9.31	2.52	0.00	0.00	1.92	0.00	6.32	5.54	3.95	5.95	1.39	0.00	2.08	33.49	22.11	9.30	4.62	24.28	0.00	20.94	6.90	2.46	8.31	5.23	10.21	19.93	2.25	1.72
25	ER4a	ExonRegion	0	444.61	192.07	509.66	182.59	34.42	205.97	56.78	71.30	153.19	217.70	122.17	151.29	44.80	164.88	226.15	593.23	458.61	700.73	102.72	18.23	246.94	524.54	173.18	215.70	380.31	337.23	37.05	36.68	258.18
26	E4_Da	NovelBoundary	0	7.90	0.00	7.23	0.00	0.00	0.00	2.12	0.00	0.00	3.71	3.76	0.00	1.72	0.00	0.00	12.62	4.64	18.49	8.09	0.00	14.04	0.00	2.36	5.26	3.60	3.52	0.00	0.00	4.56
27	E4a_E5a	KnownJunction	0	394.67	231.81	560.51	283.20	43.92	231.13	51.32	76.04	195.08	190.18	127.74	146.50	50.00	160.64	256.92	675.71	491.02	802.95	161.85	17.70	270.18	457.73	165.97	186.09	382.53	311.13	29.07	51.99	280.25
28	I4	Intron	0	17.19	1.89	1.38	0.00	1.00	4.52	0.41	1.14	6.73	5.64	0.73	2.10	0.13	0.61	3.68	10.50	2.00	15.58	3.94	0.00	12.03	1.11	0.56	3.32	2.94	6.30	1.51	1.01	4.19
29	I4_SR1	SilentIntronRegion	0	17.26	1.90	1.38	0.00	1.01	4.54	0.42	1.14	6.76	5.66	0.74	2.11	0.13	0.61	3.70	10.54	2.00	15.65	3.95	0.00	12.08	1.12	0.56	3.34	2.95	6.33	1.51	1.01	4.21
30	E5_Aa	NovelBoundary	0	10.09	0.00	1.02	0.00	0.00	3.76	0.00	0.00	7.16	9.79	4.21	2.95	0.00	1.91	0.00	9.49	3.85	13.87	15.74	0.00	24.79	0.00	0.00	2.21	3.33	0.00	0.00	2.11	0.00
31	ER5a	ExonRegion	0	446.23	186.39	455.91	199.24	18.97	204.93	66.51	63.75	196.08	212.46	149.76	182.45	45.67	177.85	275.29	683.56	473.64	807.90	115.03	18.91	273.05	549.37	227.42	216.42	491.29	429.10	65.46	47.08	269.54
32	E5_Da	NovelBoundary	0	27.55	0.00	4.29	0.00	0.00	0.00	0.00	0.00	7.80	5.83	5.98	7.92	1.43	2.19	7.77	12.70	19.79	32.75	0.00	0.00	8.70	0.00	2.51	2.69	7.05	3.43	0.00	2.29	1.68
33	E5a_E6a	KnownJunction	0	476.13	181.88	602.09	225.61	0.00	208.80	54.47	79.23	226.66	263.08	161.53	224.97	61.71	205.59	304.76	683.52	655.97	795.11	88.79	11.41	328.74	635.62	240.44	260.86	565.97	550.76	98.60	63.35	347.30
34	I5	Intron	0	19.10	2.31	1.56	3.04	0.83	2.92	0.68	1.72	5.28	3.92	0.71	1.73	0.93	2.61	7.18	7.86	4.81	17.74	6.51	0.00	10.65	0.61	0.15	5.11	3.88	9.07	0.93	0.14	2.84
35	I5_SR1	SilentIntronRegion	0	19.22	2.32	1.57	3.06	0.83	2.93	0.69	1.73	5.31	3.95	0.71	1.74	0.94	2.63	7.22	7.91	4.85	17.86	6.55	0.00	10.71	0.62	0.15	5.15	3.91	9.13	0.94	0.14	2.86
36	E6_Aa	NovelBoundary	0	14.16	0.00	5.78	0.00	0.00	5.41	0.00	1.94	4.20	0.00	3.13	2.59	1.69	4.21	9.97	0.00	3.40	28.00	16.18	0.00	8.06	0.00	0.00	5.38	3.86	0.00	0.00	0.00	3.17
37	ER6a	ExonRegion	0	516.42	228.69	665.07	243.45	28.04	293.69	99.37	78.66	282.67	301.42	213.73	320.06	72.34	229.29	340.10	827.62	821.52	932.93	136.64	26.73	391.56	682.38	291.17	273.28	593.11	633.91	102.74	76.46	395.98
38	E6_Da	NovelBoundary	0	16.57	3.49	9.79	0.00	0.00	3.38	0.00	4.58	9.26	5.55	4.62	0.00	0.00	3.99	0.00	7.65	5.72	36.99	8.09	0.00	5.37	4.96	2.46	6.10	3.22	12.10	0.00	0.00	0.00
39	E6a_E7a	KnownJunction	0	535.23	250.81	501.39	186.14	12.08	298.96	110.14	83.36	349.47	353.00	211.45	331.02	66.05	226.57	347.61	990.35	816.01	856.76	113.29	37.13	497.05	780.60	248.51	298.66	631.17	691.95	114.06	110.49	387.22
40	I6	Intron	0	22.66	4.11	4.85	1.86	0.51	4.70	0.52	1.62	4.88	4.27	1.42	2.78	0.34	2.74	3.43	11.23	7.27	24.90	5.63	0.57	9.54	2.06	1.41	4.01	6.59	7.66	0.47	0.59	4.20
41	I6_SR1	SilentIntronRegion	0	22.71	4.11	4.86	1.86	0.51	4.71	0.52	1.63	4.89	4.27	1.42	2.78	0.34	2.75	3.43	11.25	7.29	24.94	5.64	0.57	9.56	2.06	1.41	4.02	6.61	7.67	0.48	0.59	4.20
42	E7_Aa	NovelBoundary	0	29.49	15.71	9.79	10.57	0.00	3.64	0.00	2.49	5.97	5.55	6.17	10.15	0.00	3.86	0.00	9.87	18.93	36.99	0.00	0.00	19.53	2.19	2.17	18.48	11.82	20.47	0.00	0.00	7.26
43	ER7a	ExonRegion	0	514.56	264.18	529.20	203.23	34.80	307.92	92.75	84.29	331.88	289.13	213.14	329.66	73.53	236.79	354.87	805.57	809.40	966.25	157.52	17.73	387.36	714.04	289.01	303.74	667.42	670.76	90.22	70.21	426.24
44	E7_Da	NovelBoundary	0	8.49	14.06	9.59	9.49	0.00	0.00	0.00	10.90	5.21	2.04	1.36	2.77	0.00	5.32	0.00	16.60	10.31	33.13	24.28	0.00	3.77	6.42	0.00	5.50	12.39	8.33	0.00	1.75	1.98
45	E7a_E8a	KnownJunction	0	482.09	232.78	719.12	400.97	42.89	262.13	85.59	97.84	414.25	338.82	219.39	330.63	94.99	247.27	425.95	829.63	959.75	855.73	97.11	48.30	331.15	738.69	313.38	355.06	658.82	759.75	90.25	73.24	600.09
46	I7	Intron	0	9.07	8.04	7.30	6.99	0.82	7.85	2.44	4.02	17.87	7.86	3.00	5.12	1.46	5.31	19.54	15.37	15.75	20.42	7.30	0.34	11.88	9.33	3.22	10.55	17.48	30.89	1.66	1.48	20.59
47	I7_SR1	SilentIntronRegion	0	9.08	8.05	7.31	6.99	0.82	7.86	2.44	4.03	17.89	7.87	3.00	5.12	1.46	5.31	19.56	15.39	15.77	20.45	7.31	0.34	11.90	9.34	3.22	10.57	17.50	30.93	1.66	1.48	20.62
48	E8_Aa	NovelBoundary	0	15.40	0.00	3.66	0.00	0.00	0.00	0.00	0.00	12.55	6.91	0.00	2.83	5.16	0.00	0.00	10.63	11.52	9.25	8.09	0.00	9.15	6.86	0.00	2.75	0.00	7.90	0.00	0.00	4.16
49	ER8a	ExonRegion	0	334.13	243.43	500.45	201.76	24.34	263.12	68.48	79.42	366.23	274.58	183.38	215.61	72.78	184.01	353.77	677.90	563.68	593.79	172.74	22.62	354.20	555.93	201.82	385.83	679.75	578.73	107.27	54.04	518.81
50	IG15	Intergenic	0	3.51	5.39	4.70	2.76	0.60	5.75	1.40	1.47	9.43	5.78	2.78	2.73	1.12	3.27	9.78	8.26	13.95	8.57	6.32	0.23	11.28	4.23	1.68	7.81	13.66	22.60	1.51	1.04	14.11
51	IG15_SR5	SilentIntergenicRegion	0	8.27	20.36	16.83	7.03	1.93	19.09	4.90	4.55	32.87	19.28	10.05	9.74	3.89	8.75	27.12	25.87	33.54	27.39	19.42	0.68	34.89	15.29	6.00	22.75	52.09	72.88	5.42	2.73	45.84
52	IG15_AR5	ActiveIntergenicRegion	0	0.60	0.00	1.30	0.00	0.00	8.37	0.00	0.00	0.63	0.72	0.49	0.04	0.00	1.73	12.19	7.82	4.21	6.94	1.06	0.00	1.36	5.41	0.00	3.95	2.46	10.96	0.00	0.00	7.50
53	IG15_SR4	SilentIntergenicRegion	0	1.68	0.66	1.12	1.02	0.00	2.62	0.34	0.22	1.74	2.06	0.72	0.35	0.26	2.19	2.74	3.02	5.90	3.55	2.44	0.00	5.27	1.29	0.39	2.48	2.32	8.28	0.31	0.35	4.80
54	IG15_AR4	ActiveIntergenicRegion	0	2.41	0.00	1.88	0.81	0.00	2.63	0.23	0.62	4.73	2.93	0.94	0.14	0.51	2.04	12.93	2.51	10.92	4.81	2.52	0.00	10.76	0.81	0.61	5.57	1.29	10.61	0.00	0.18	8.06
55	IG15_SR3	SilentIntergenicRegion	0	0.96	0.67	1.18	1.04	0.36	1.15	0.15	0.70	2.57	1.52	0.74	0.54	0.10	1.78	5.88	2.06	10.74	3.62	5.13	0.00	4.53	0.55	0.46	4.60	1.65	9.20	0.47	0.71	7.48
56	IG15_AR3	ActiveIntergenicRegion	0	0.72	0.00	0.84	0.00	0.00	2.01	0.18	0.26	2.63	1.31	0.00	0.00	0.44	2.14	6.46	0.65	8.71	2.01	3.45	0.50	2.68	0.77	0.16	3.76	1.86	8.01	0.33	1.04	7.16
57	IG15_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	20.13
58	IG15_AR1	ActiveIntergenicRegion	0	7.21	0.72	0.94	1.61	1.09	0.67	0.68	1.24	2.39	1.17	0.67	2.42	0.43	2.76	7.48	3.32	16.08	3.95	0.72	0.00	2.29	0.81	0.00	5.84	1.98	1.66	0.41	1.84	0.15