Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RGP1	Gene	0	37.55	47.37	78.20	24.11	35.51	60.34	12.33	17.99	29.16	80.45	60.38	73.57	37.05	88.12	20.98	51.85	80.52	69.89	29.63	17.07	70.98	23.64	80.91	65.43	52.29	57.60	49.44	84.94	45.80
2	456972	Transcript	0	0.02	0.00	0.00	0.00	0.00	0.00	0.02	0.01	0.00	0.58	0.02	0.03	0.00	0.00	0.00	0.06	0.02	0.79	0.00	0.00	0.01	0.04	0.00	0.00	0.00	0.09	0.01	0.04	0.01
3	496906	Transcript	0	2.72	0.49	3.28	5.02	9.40	2.12	0.61	0.98	0.26	2.77	0.67	2.47	1.38	4.53	2.33	5.75	2.12	2.98	1.22	1.05	3.29	2.24	3.39	0.76	1.80	1.51	0.20	1.22	0.72
4	378078	Transcript	1	8.49	14.68	4.60	3.41	9.18	15.57	4.84	4.67	23.23	18.14	16.11	14.21	6.12	15.34	7.89	12.80	19.82	19.74	12.63	4.86	28.33	1.92	8.39	17.09	13.05	6.51	16.70	21.59	9.59
5	ER1a	ExonRegion	0	0.03	0.00	0.00	0.00	0.00	0.00	0.03	0.03	0.00	1.15	0.04	0.06	0.00	0.00	0.00	0.12	0.03	1.58	0.00	0.00	0.02	0.08	0.00	0.00	0.00	0.17	0.03	0.08	0.02
6	E1_Da	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	1.84	0.00	0.00	1.49	0.00	0.00	0.00	0.00	2.28	0.00	0.00	0.00	9.25	0.00	3.97	6.10	0.00	2.51	2.93	0.00	0.00	0.00	0.00	0.00
7	E1a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	7.40	0.00	0.00	0.00	2.04	1.61	0.00	0.00	1.06	0.00	11.02	1.13	27.74	0.00	0.00	0.00	2.19	2.31	2.51	0.00	0.00	0.00	0.00	0.00
9	E2_Ab	NovelBoundary	0	2.71	4.85	3.51	37.10	40.67	8.13	0.00	2.44	0.00	9.63	2.66	1.51	0.00	2.81	7.77	26.70	1.33	14.64	0.00	4.13	7.38	6.71	14.04	0.00	1.67	8.07	0.00	3.91	2.87
10	ER2a	ExonRegion	0	1.99	0.00	3.29	14.63	16.72	3.49	0.86	1.58	0.00	3.97	0.55	1.86	0.00	1.33	1.80	11.39	0.00	5.56	0.00	1.00	3.77	2.90	6.07	0.31	0.00	3.99	0.00	1.63	0.58
11	ER2b	ExonRegion	0	15.64	6.45	35.01	62.56	63.01	15.38	9.11	6.82	2.37	15.35	14.79	17.02	12.56	20.02	9.54	53.47	15.71	35.78	3.35	17.07	14.05	16.22	40.45	10.44	5.56	33.44	12.31	43.26	12.33
12	E2_Ac	KnownBoundary	0	30.38	21.04	72.40	102.67	115.83	23.98	16.02	3.88	7.92	26.84	33.09	31.51	26.05	39.66	18.34	89.96	40.40	70.89	8.09	30.93	23.87	27.03	69.49	16.57	17.62	79.78	31.01	99.16	33.34
13	ER2c	ExonRegion	0	32.81	26.55	87.86	89.78	102.95	29.98	18.42	12.58	8.18	45.16	48.83	59.51	23.82	61.70	5.13	70.93	68.23	60.95	20.87	21.08	44.26	28.29	62.84	12.01	16.99	86.31	55.30	122.34	39.33
14	E2a_E3a	KnownJunction	0	20.88	25.98	95.25	72.90	77.37	30.58	18.54	18.07	7.06	48.89	39.61	55.33	18.15	59.91	0.00	55.00	89.45	23.76	24.28	11.83	46.41	25.82	40.58	5.32	15.42	55.19	53.08	88.02	37.04
15	E2a_E4a	NovelJunction	0	2.77	0.00	4.11	0.00	12.08	0.00	0.00	0.00	3.20	0.00	1.17	1.87	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00	0.00
16	E3_Aa	NovelBoundary	0	0.00	0.00	1.30	0.00	0.00	0.00	0.00	4.78	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	3.11	0.00	0.00	0.00	3.61	0.00	1.87	0.00	0.00	0.00	0.00	2.11	1.58
17	ER3a	ExonRegion	0	25.32	13.16	35.74	5.85	12.55	36.16	6.27	16.30	10.16	38.18	22.78	21.11	11.78	64.38	8.92	41.20	39.62	53.98	7.84	22.61	41.26	23.68	26.40	23.97	16.11	21.11	8.00	29.99	22.68
18	E3a_E4a	KnownJunction	0	55.15	19.49	24.29	10.57	13.26	49.49	10.13	22.84	11.15	47.81	26.76	21.51	34.68	104.36	28.50	79.79	28.14	89.52	16.18	22.49	68.79	28.34	44.72	44.14	29.93	46.30	0.00	28.67	32.09
19	E3a_E5a	NovelJunction	0	0.00	3.97	0.00	0.00	0.00	3.68	0.00	2.34	0.00	1.80	0.00	0.00	0.00	1.22	0.00	0.00	0.97	4.62	0.00	0.00	3.65	0.00	0.00	0.00	3.11	0.00	0.00	0.00	0.00
20	ER4a	ExonRegion	0	53.60	48.36	55.87	19.43	23.34	72.22	19.70	21.41	14.78	88.86	58.78	71.39	36.47	112.08	18.64	64.49	87.04	86.16	20.05	37.03	63.50	27.88	88.42	33.43	42.12	72.40	29.06	85.94	49.18
21	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E4a_E5a	KnownJunction	0	92.37	62.15	126.47	77.86	62.19	77.27	8.53	26.23	24.03	85.32	51.66	66.60	38.44	169.25	15.95	92.87	115.88	121.24	16.18	7.77	77.09	50.12	99.98	51.38	65.43	80.08	27.98	70.90	38.16
23	ER5a	ExonRegion	0	95.74	47.24	136.17	43.88	58.12	84.67	14.85	24.88	17.76	102.61	64.80	67.15	41.80	165.28	14.87	74.36	84.35	98.67	20.20	37.88	76.19	56.68	106.99	81.56	49.16	62.23	32.75	71.43	48.01
24	E5_Da	KnownBoundary	0	5.90	0.00	4.61	0.00	14.74	1.69	7.27	0.00	0.00	2.04	2.97	4.94	0.00	4.43	0.00	9.41	3.65	0.00	0.00	0.00	3.65	4.62	4.48	5.38	5.34	0.00	0.00	9.93	0.00
25	E5a_E5b	KnownJunction	0	114.49	68.93	99.71	32.14	55.26	101.87	19.05	45.59	13.67	128.90	73.99	72.32	46.24	153.39	0.00	66.71	62.58	111.73	8.09	46.56	78.18	59.31	106.77	68.13	44.74	55.02	62.42	75.40	55.53
26	E5a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.82	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.31	0.00
28	ER5b	ExonRegion	0	6.17	1.46	6.55	0.44	11.47	2.86	0.98	1.38	0.78	4.33	1.45	2.75	4.15	12.26	5.20	5.85	6.37	3.39	3.66	2.16	6.09	3.82	4.09	1.98	5.41	0.54	0.59	2.03	1.57
29	E5_Ab	KnownBoundary	0	12.03	4.85	11.01	0.00	6.78	5.45	0.00	0.00	0.00	7.71	0.00	1.66	0.00	11.26	0.00	2.98	3.26	4.62	0.00	11.25	8.66	3.79	0.00	3.05	1.48	0.00	0.00	0.00	0.00
30	ER5c	ExonRegion	0	101.49	63.30	99.39	45.79	45.80	76.78	21.62	41.17	16.45	114.73	75.42	99.05	43.11	159.82	21.84	90.39	87.65	104.68	31.98	31.84	68.23	68.09	127.15	68.74	59.12	79.18	40.15	89.67	54.27
31	E5_Db	NovelBoundary	0	2.83	0.00	1.15	0.00	0.00	7.56	0.00	0.00	0.00	0.00	1.20	0.00	0.00	0.93	0.00	0.00	3.15	5.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E5b_E6a	KnownJunction	0	132.42	78.63	101.08	35.59	28.88	90.16	22.31	42.70	9.99	106.06	91.08	90.93	47.00	187.78	27.90	117.27	90.55	93.75	64.74	15.30	84.67	80.56	158.44	71.12	43.57	73.17	31.36	88.25	55.69
33	I5	Intron	0	4.75	0.00	0.93	0.00	0.90	1.52	0.00	0.34	0.31	0.53	1.54	0.00	0.00	1.34	0.00	0.00	0.83	1.78	2.36	1.02	1.05	0.33	0.33	0.79	0.26	0.00	0.00	2.41	0.00
34	I5_SR1	SilentIntronRegion	0	4.79	0.00	0.93	0.00	0.91	1.54	0.00	0.34	0.31	0.54	1.55	0.00	0.00	1.35	0.00	0.00	0.83	1.79	2.35	1.03	1.06	0.34	0.34	0.80	0.27	0.00	0.00	2.43	0.00
35	E6_Aa	NovelBoundary	0	2.42	0.00	3.59	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	2.26	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	1.97	6.10	0.00	0.00	0.00	0.00	0.00
36	ER6a	ExonRegion	0	75.24	62.64	100.93	32.78	26.30	92.94	19.61	36.88	12.85	80.83	62.56	86.41	31.51	124.60	16.88	92.02	79.52	89.21	36.76	33.50	88.85	51.11	118.58	64.56	34.57	57.41	27.52	71.85	39.44
37	E6_Da	NovelBoundary	0	18.46	4.85	11.24	0.00	0.00	18.26	2.46	2.54	1.55	3.60	1.33	11.20	0.00	10.79	0.00	15.91	18.07	9.89	8.09	11.25	5.66	2.24	0.00	10.77	1.67	2.06	0.00	11.55	2.58
38	E6a_E7a	KnownJunction	0	40.58	56.33	127.39	43.14	47.16	89.74	27.63	29.86	8.89	77.69	76.65	99.15	32.90	110.54	0.00	49.19	73.45	74.87	48.55	17.20	59.32	36.66	133.96	55.27	53.34	62.23	52.18	80.25	58.83
39	E6a_E9a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.92	0.00	0.00	0.00	0.00	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	I6	Intron	0	24.52	5.93	7.97	10.25	2.33	17.04	4.80	3.51	0.80	11.01	7.94	6.03	0.77	8.63	4.61	8.54	15.65	13.47	7.61	5.25	10.54	4.73	2.59	7.18	4.43	3.00	2.18	11.65	1.76
41	I6_SR1	SilentIntronRegion	0	24.75	5.98	8.05	10.35	2.35	17.20	4.85	3.54	0.81	11.11	8.02	6.09	0.78	8.70	4.65	8.62	15.80	13.59	7.69	5.30	10.64	4.77	2.61	7.24	4.47	3.02	2.20	11.75	1.77
42	E7_Aa	NovelBoundary	0	42.29	4.85	4.96	0.00	0.00	19.45	0.00	5.92	1.40	6.03	8.70	15.06	1.97	15.55	0.00	5.97	35.25	13.87	7.87	4.13	13.60	0.00	2.51	5.56	6.90	4.38	0.00	12.58	0.00
43	ER7a	ExonRegion	1	80.85	80.30	161.62	60.73	48.26	134.30	45.46	38.32	18.06	119.53	105.71	111.68	42.41	170.74	15.71	97.33	124.89	109.34	40.94	42.36	119.20	65.17	155.35	98.47	54.45	91.33	67.92	122.38	52.96
44	E7_Da	NovelBoundary	0	10.68	0.00	0.00	0.00	0.00	2.84	2.40	0.00	2.53	3.60	0.00	1.69	0.00	0.91	0.00	0.00	1.37	5.39	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E7a_E8a	KnownJunction	0	79.87	106.55	174.75	72.47	35.52	172.42	55.78	56.68	16.69	173.96	135.78	119.76	44.01	162.94	15.35	96.69	131.54	147.18	16.18	50.78	140.03	65.63	146.86	83.32	54.44	98.70	52.28	151.87	96.83
46	E7a_E9a	NovelJunction	0	3.01	0.00	1.54	0.00	0.00	1.57	0.00	0.00	0.00	1.96	1.61	2.95	0.00	1.11	0.00	0.00	2.25	9.25	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	0.00
47	I7	Intron	0	4.35	0.00	0.85	0.00	2.48	1.05	0.00	0.00	0.29	0.37	0.00	0.63	0.00	0.80	0.00	0.00	2.65	0.57	0.81	0.70	0.00	0.91	0.00	0.55	0.00	0.00	0.00	2.48	0.00
48	I7_SR1	SilentIntronRegion	0	4.39	0.00	0.86	0.00	2.50	1.06	0.00	0.00	0.28	0.37	0.00	0.63	0.00	0.81	0.00	0.00	2.68	0.58	0.82	0.71	0.00	0.92	0.00	0.55	0.00	0.00	0.00	2.51	0.00
49	E8_Aa	NovelBoundary	0	7.73	4.85	2.62	0.00	0.00	1.96	0.00	0.00	3.93	2.04	0.00	0.00	0.00	2.24	9.77	0.00	2.45	4.62	0.00	0.00	0.00	0.00	3.84	0.00	0.00	0.00	0.00	0.00	0.00
50	ER8a	ExonRegion	0	67.43	75.38	132.88	43.53	31.15	104.16	40.95	38.60	20.51	118.81	71.11	120.53	59.65	172.51	20.28	84.27	150.87	130.04	33.37	34.35	114.42	59.67	123.85	77.75	61.44	94.02	49.21	132.11	81.46
51	E8_Da	NovelBoundary	0	2.24	0.00	0.00	0.00	0.00	3.53	0.00	0.00	4.32	3.67	0.00	1.54	0.00	2.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	1.74	0.00	0.00	2.07	1.68
52	E8a_E9a	KnownJunction	0	30.67	87.64	96.57	57.37	53.94	90.89	36.05	27.52	30.48	103.22	56.75	93.49	52.70	167.92	7.57	73.29	151.62	106.85	32.37	27.54	111.39	52.12	103.13	99.83	51.75	99.99	40.75	116.24	48.89
53	ER9a	ExonRegion	0	54.33	71.66	151.21	54.60	45.42	97.19	29.33	33.16	21.91	129.09	69.35	104.77	54.30	167.49	23.03	82.60	145.41	120.19	31.62	30.68	135.01	49.62	113.67	78.38	61.87	86.45	59.44	132.42	79.14
54	E9_Da	KnownBoundary	0	52.50	78.92	164.14	48.32	14.00	109.19	29.24	21.80	24.82	157.35	90.54	129.40	58.91	169.14	26.71	61.66	173.07	123.55	56.65	21.83	165.82	34.57	138.24	101.99	52.28	107.89	77.98	171.14	30.34
55	E9a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	ER9b	ExonRegion	0	50.43	62.51	127.70	33.63	46.93	114.96	21.16	24.76	23.66	126.44	103.68	90.92	38.16	130.45	19.96	78.18	115.06	105.10	45.30	28.26	123.64	30.78	119.06	85.31	69.77	84.28	76.97	114.19	53.77
57	E9_Ab	KnownBoundary	0	72.73	54.58	141.22	8.84	5.75	88.86	12.30	24.29	29.11	119.00	76.08	143.16	68.53	121.51	17.34	68.70	162.65	116.10	24.28	32.17	152.34	38.89	99.04	98.64	73.61	103.94	44.83	118.62	58.04
58	ER9c	ExonRegion	0	43.68	48.71	109.83	27.08	47.87	80.65	14.66	27.65	31.31	107.81	97.86	110.96	57.47	109.43	20.79	66.12	118.65	81.43	26.90	16.57	99.00	25.91	111.83	68.73	57.80	100.04	66.72	132.48	67.28
59	E9_Db	KnownBoundary	1	51.55	36.16	71.80	46.59	6.34	39.10	5.44	12.19	21.99	50.69	57.26	83.04	37.03	74.96	18.34	50.80	91.05	50.86	8.09	7.77	50.90	20.61	84.46	48.39	25.27	36.43	13.72	114.08	30.24
60	ER9d	ExonRegion	0	31.52	48.25	69.81	20.45	36.46	46.70	7.51	14.61	37.40	75.60	55.12	76.81	41.88	76.37	25.74	44.24	76.89	62.52	30.43	11.88	60.09	18.38	77.09	72.45	58.51	54.71	51.85	85.98	48.46
61	E9_Dc	KnownBoundary	0	3.01	48.09	17.57	8.84	7.07	22.64	19.34	7.17	52.41	57.24	31.00	15.90	11.75	26.28	56.61	50.80	13.98	0.00	8.09	18.19	23.54	6.47	48.17	31.10	37.17	13.60	60.48	60.97	30.57
62	ER9e	ExonRegion	0	8.49	14.68	4.60	3.41	9.18	15.57	4.84	4.67	23.23	18.14	16.11	14.21	6.12	15.34	7.89	12.80	19.82	19.74	12.63	4.86	28.33	1.92	8.39	17.09	13.05	6.51	16.70	21.59	9.59
63	IG24	Intergenic	0	2.53	4.52	1.16	1.63	1.72	2.97	1.52	1.89	6.03	5.74	3.38	4.17	2.10	4.49	3.75	3.17	7.81	3.06	3.53	1.62	7.48	0.57	2.31	3.85	3.06	1.57	3.35	7.37	2.52
64	IG24_AR1	ActiveIntergenicRegion	0	6.13	8.03	2.68	2.88	4.72	8.86	1.84	3.60	11.40	13.58	9.64	8.98	6.85	10.56	5.46	7.19	14.41	9.01	9.52	2.56	16.51	1.31	9.90	11.90	9.62	5.90	9.49	21.63	8.76
65	IG24_SR1	SilentIntergenicRegion	0	6.40	9.06	2.92	2.50	4.19	7.01	2.64	5.28	14.20	12.91	12.16	12.13	7.25	13.65	10.84	9.44	21.52	7.94	7.56	3.28	19.96	1.73	6.52	8.85	9.88	4.81	12.32	21.79	6.37
66	IG24_AR2	ActiveIntergenicRegion	0	5.56	19.97	4.34	6.20	8.44	10.69	2.32	4.51	33.50	9.78	9.43	13.41	7.36	15.62	30.09	14.56	17.63	12.86	11.05	1.48	13.77	2.60	7.82	17.05	10.91	3.86	13.72	16.20	11.74
67	IG24_SR3	SilentIntergenicRegion	0	1.00	2.14	0.47	1.00	0.08	1.07	0.66	0.86	3.18	2.65	0.50	2.19	0.43	0.71	1.13	0.97	4.28	0.76	1.24	0.71	3.33	0.17	0.31	1.11	0.56	0.20	0.29	2.11	0.65
68	IG24_SR4	SilentIntergenicRegion	0	1.26	2.82	0.51	1.18	0.84	1.06	1.54	0.95	2.47	3.35	0.66	1.37	0.15	1.91	1.26	1.00	3.76	1.00	1.83	1.44	3.76	0.16	0.16	1.32	0.54	0.27	0.47	2.37	0.49