Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	FZD6	Gene	0	21.56	54.77	15.66	240.57	248.93	95.47	141.63	65.48	38.93	94.56	29.60	71.58	6.11	22.50	14.97	32.38	26.44	62.93	36.92	11.70	139.76	22.53	17.06	31.92	31.08	6.12	18.30	3.48	22.02
2	358755	Transcript	0	26.81	42.53	18.14	252.68	258.19	87.13	125.03	78.65	25.80	106.18	33.34	67.73	6.01	25.94	12.82	29.00	24.32	64.64	32.26	9.95	126.71	27.68	19.91	28.46	33.69	7.02	17.79	3.41	23.34
3	IG31_AR2	ActiveIntergenicRegion	0	2.14	3.28	0.00	0.00	0.00	0.00	0.00	1.23	0.00	0.00	0.00	1.24	0.00	0.38	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.00
4	IG31_SR1	SilentIntergenicRegion	0	2.14	3.28	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	1.24	0.00	0.91	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	1.63	0.00
5	IG31_AR3	ActiveIntergenicRegion	0	1.55	2.30	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.83	0.00	0.86	0.00	0.00	0.00	0.00	0.00	0.00	1.25	0.00	0.00	0.00	0.00	0.00	0.00	1.47	0.00
6	ER1a	ExonRegion	1	7.05	6.25	6.88	238.66	200.47	16.46	40.62	25.60	1.85	40.87	8.73	22.21	2.59	10.19	3.79	17.72	12.32	36.16	12.74	0.00	37.43	10.44	11.88	6.44	10.48	1.29	3.01	2.01	4.41
7	E1a_E2a	KnownJunction	1	0.00	8.82	0.00	36.88	20.34	6.71	19.57	19.16	0.00	23.77	0.00	7.14	1.56	3.15	0.00	3.06	5.65	9.63	8.09	0.00	16.57	6.66	6.94	2.69	3.71	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	22.14	32.25	10.88	173.41	162.94	73.66	114.36	56.84	6.61	107.37	31.66	56.33	6.19	24.70	7.01	25.16	20.44	51.75	26.38	4.70	116.25	21.63	18.23	23.22	34.28	2.20	11.99	2.56	9.88
9	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	1.76	0.00	0.00	2.69	0.00	0.00	0.00	0.00	0.00
10	E2a_E3a	KnownJunction	0	44.71	27.92	19.28	366.25	220.62	113.91	155.40	84.35	16.44	153.23	39.54	66.66	4.87	29.00	17.14	47.89	19.74	47.65	32.37	3.72	165.33	33.06	16.40	27.81	41.14	7.55	32.75	0.00	20.70
11	I2_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.83	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.42	0.00	2.06	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	I2_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.76	0.00	0.00	0.00	0.00	1.69	0.00	0.65	0.00	0.00	0.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	I2_SR2	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.76	0.00	0.00	0.00	0.00	0.00	0.00	2.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	I2_AR5	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.00	0.59	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	I2_AR6	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.00	2.73	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	I2_AR7	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	I2_AR10	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	I2_AR11	ActiveIntronRegion	0	0.54	2.43	0.00	0.00	1.23	0.87	0.00	0.23	3.24	0.44	0.00	0.70	0.00	0.48	1.16	0.00	0.19	0.73	1.61	0.00	1.28	0.00	0.00	0.00	0.18	0.20	0.00	0.00	0.00
19	I2_AR14	ActiveIntronRegion	0	0.00	0.48	0.00	3.24	0.73	0.62	0.00	0.00	2.74	4.12	0.00	0.52	0.00	0.00	0.00	0.00	0.40	1.22	0.25	0.00	3.60	0.00	0.00	0.32	0.65	0.24	0.83	0.00	0.00
20	E3_Aa	NovelBoundary	0	2.48	4.46	0.00	10.57	0.00	1.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.93	16.74	0.00	5.87	4.62	0.00	0.00	2.05	0.00	2.51	2.45	0.00	0.00	0.00	0.00	4.16
21	ER3a	ExonRegion	0	35.54	57.71	19.67	279.07	254.74	108.17	171.10	61.70	10.78	157.13	53.26	78.18	5.22	30.84	9.78	48.69	29.89	64.52	44.71	14.65	161.64	28.17	23.61	36.18	41.20	4.95	29.68	5.11	23.87
22	E3_Da	NovelBoundary	0	6.02	0.00	0.00	0.00	0.00	0.00	0.00	1.89	4.72	0.00	0.00	1.42	0.00	2.70	0.00	0.00	1.19	4.62	0.00	0.00	2.01	0.00	0.00	0.00	1.55	4.38	0.00	0.00	0.00
23	E3a_E4a	KnownJunction	0	39.28	67.96	12.88	253.44	296.51	152.89	165.69	122.97	19.49	156.91	52.04	89.67	7.64	38.53	17.94	28.69	32.62	122.52	56.65	26.46	183.63	23.68	25.76	33.86	39.93	6.01	20.77	6.07	54.41
24	E3a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	I3_SR1	SilentIntronRegion	0	0.00	13.53	0.00	0.00	0.00	0.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.43	0.00	0.00	0.00	1.16	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	I3_AR1	ActiveIntronRegion	0	1.52	3.85	0.00	3.53	1.30	1.92	1.14	1.04	2.40	2.63	1.60	1.48	0.39	2.18	2.61	0.70	2.41	0.82	3.09	0.78	2.76	0.02	1.02	0.31	0.52	0.22	0.00	1.85	0.66
27	I3_SR2	SilentIntronRegion	0	1.97	3.19	0.00	0.81	0.13	2.66	0.00	0.00	1.90	3.56	2.23	0.67	0.52	1.09	1.04	0.36	2.78	4.11	4.26	0.00	3.50	0.76	0.00	0.00	1.05	0.34	0.00	1.40	0.00
28	I3_AR2	ActiveIntronRegion	0	2.14	2.87	0.00	0.00	0.00	1.37	0.00	0.00	0.00	3.25	3.57	0.00	0.00	1.70	5.60	2.53	0.00	1.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.20	0.00
29	I3_AR3	ActiveIntronRegion	0	0.37	1.54	0.00	3.74	3.39	2.15	0.96	0.48	1.02	2.45	0.31	2.01	0.14	1.24	0.40	1.29	1.49	3.04	0.83	0.00	2.60	0.00	0.16	0.75	0.37	0.48	0.80	0.35	0.29
30	E4_Aa	NovelBoundary	0	0.00	4.56	0.00	0.00	0.00	0.00	2.80	0.00	2.59	0.00	0.00	1.39	0.00	1.97	0.00	0.00	1.04	0.00	0.00	0.00	4.09	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00
31	ER4a	ExonRegion	0	28.32	59.07	27.89	296.34	260.99	98.04	149.22	91.39	19.53	112.15	38.98	83.98	5.91	26.19	7.66	37.86	28.75	76.45	41.27	13.45	152.66	27.98	23.05	26.52	41.15	9.21	18.63	3.44	22.96
32	E4_Da	NovelBoundary	0	12.09	18.91	0.00	58.88	86.21	25.90	59.22	11.65	8.31	40.66	13.57	14.52	5.35	3.83	0.00	12.47	2.34	0.00	0.00	13.48	38.19	7.58	1.92	11.66	10.84	8.37	5.81	0.00	7.23
33	E4a_E5a	KnownJunction	0	51.61	79.21	34.36	342.52	386.26	109.73	177.65	86.05	44.37	130.02	46.69	80.75	9.17	42.36	8.37	24.79	37.14	90.67	48.55	13.89	179.49	37.73	34.77	39.00	35.73	16.05	25.10	2.25	31.79
34	E4a_E6a	NovelJunction	1	0.00	0.00	1.54	27.82	0.00	1.53	23.69	2.54	0.00	9.51	0.00	6.26	0.00	0.00	0.00	0.00	3.89	0.00	0.00	0.00	6.14	2.48	2.51	0.00	1.44	0.00	0.00	0.00	2.05
35	I4	Intron	0	0.74	2.03	0.05	6.32	1.08	1.56	3.23	0.06	1.15	1.14	0.11	1.69	0.14	0.63	0.58	1.17	0.66	3.18	1.21	0.43	3.10	0.17	0.23	0.54	0.81	0.10	0.92	0.26	0.00
36	I4_AR1	ActiveIntronRegion	0	0.82	2.61	0.08	8.54	1.16	1.57	4.32	0.09	1.10	1.10	0.11	2.38	0.22	0.67	0.44	0.95	0.85	3.99	1.83	0.00	3.40	0.26	0.34	0.72	0.95	0.15	1.40	0.39	0.00
37	I4_SR1	SilentIntronRegion	0	0.60	0.90	0.00	2.00	0.91	1.53	1.12	0.00	1.25	1.21	0.11	0.34	0.00	0.55	0.86	1.61	0.28	1.61	0.00	1.28	2.52	0.00	0.00	0.20	0.53	0.00	0.00	0.00	0.00
38	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.65	2.57	0.00	1.89	5.51	0.00	8.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER5a	ExonRegion	1	33.27	44.86	30.93	364.60	309.99	115.92	139.09	102.24	36.47	138.89	48.01	89.74	6.64	33.40	12.18	31.22	25.55	70.79	36.66	8.11	174.60	32.10	26.94	40.19	54.33	12.90	38.28	7.99	37.44
40	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	22.11	0.00	5.84	0.00	2.68	3.99	5.73	1.87	0.00	3.79	0.00	3.82	0.00	0.00	0.00	0.00	2.05	0.00	0.00	2.69	1.59	0.00	0.00	0.00	0.00
41	E5a_E6a	KnownJunction	1	27.13	49.83	30.22	223.67	243.90	80.30	111.45	73.90	44.67	94.71	46.76	74.67	5.29	31.17	8.37	24.94	25.84	98.89	32.37	13.48	118.97	33.01	29.60	21.65	46.67	6.14	11.83	5.84	26.51
42	I5_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	1.36	0.56	0.00	0.00	0.31	1.12	0.00	0.67	0.00	0.00	0.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	6.48	1.96	2.17	2.54	0.00	2.04	0.00	1.48	0.00	1.26	0.00	0.00	0.86	0.00	8.09	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER6a	ExonRegion	1	30.20	46.05	25.80	287.42	330.18	82.66	129.22	128.13	36.77	125.46	30.93	87.58	9.50	29.27	8.23	30.89	29.97	74.79	33.30	11.52	125.00	44.99	26.49	40.52	44.50	12.60	20.52	6.74	35.97
45	E6_Da	NovelBoundary	0	0.00	0.00	0.00	10.57	20.19	0.00	12.99	15.78	1.43	3.75	0.00	5.93	0.00	0.00	0.00	3.82	4.34	4.62	8.09	3.14	3.57	1.90	2.41	0.00	0.00	0.00	0.00	2.07	0.00
46	E6a_E7a	KnownJunction	0	16.52	9.31	12.61	234.46	434.89	69.45	101.56	136.91	31.91	76.30	17.43	79.97	7.93	21.80	40.86	26.24	22.17	42.25	8.09	6.29	73.40	48.08	6.35	36.13	26.71	9.31	2.09	0.00	15.58
47	I6	Intron	0	1.01	1.29	0.22	4.34	9.19	4.06	6.91	1.48	1.69	4.75	0.16	2.19	0.35	0.70	1.36	3.62	1.00	4.21	3.22	0.37	6.80	0.00	1.09	1.45	0.96	0.32	0.49	0.33	0.45
48	I6_AR1	ActiveIntronRegion	0	0.90	0.81	0.28	4.23	10.29	4.06	7.47	1.55	1.18	4.38	0.20	2.44	0.44	0.65	1.70	4.33	1.01	4.11	2.96	0.23	7.70	0.00	0.91	1.45	1.08	0.00	0.62	0.27	0.56
49	I6_SR1	SilentIntronRegion	0	2.87	1.72	0.00	5.63	10.88	1.48	5.09	0.31	3.99	7.37	0.00	1.73	0.00	1.06	0.00	0.00	0.46	4.45	4.46	0.00	4.19	0.00	2.45	0.00	1.12	0.10	0.00	0.00	0.00
50	I6_AR2	ActiveIntronRegion	0	0.37	4.38	0.00	4.20	0.46	6.15	4.47	1.93	3.59	5.49	0.00	0.88	0.00	0.79	0.00	1.45	1.40	4.77	4.06	1.58	2.72	0.00	1.35	2.52	0.00	2.69	0.00	0.96	0.00
51	E7_Aa	NovelBoundary	0	8.14	0.00	2.57	43.14	13.85	0.00	2.57	0.00	2.83	1.64	0.00	0.00	0.00	5.14	0.00	0.00	2.34	9.25	16.18	0.00	7.46	0.00	0.00	2.99	1.70	0.00	0.00	0.00	0.00
52	ER7a	ExonRegion	0	12.79	63.68	4.46	188.06	234.71	104.73	150.47	33.18	66.44	63.56	19.34	63.63	5.65	16.57	25.26	29.87	26.02	54.29	38.24	13.02	142.30	12.31	8.84	35.82	18.08	3.02	16.66	2.30	19.93
53	IG32_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	4.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.73	0.00	2.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	IG32_SR2	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	3.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	2.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	IG32_AR5	ActiveIntergenicRegion	0	3.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.05	0.20	0.00	0.89