Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	MTMR9	Gene	0	18.07	35.81	25.26	31.32	28.84	35.79	14.36	14.23	32.53	27.12	36.63	21.45	13.21	33.74	32.96	70.09	42.08	49.38	56.22	25.43	52.70	15.77	54.75	34.45	35.32	23.25	53.92	18.02	31.13
2	221086	Transcript	0	40.38	36.31	58.14	49.87	30.86	35.59	17.88	30.92	20.30	26.77	48.48	29.85	19.95	48.91	36.80	81.09	56.34	80.00	50.45	39.84	51.86	36.61	114.62	27.17	52.41	41.20	59.79	30.58	45.98
3	IG19_AR1	ActiveIntergenicRegion	0	3.00	0.91	3.90	7.05	7.59	5.07	2.51	0.96	2.88	3.00	4.76	2.33	0.84	2.49	3.10	7.29	3.95	5.31	5.80	0.71	1.41	5.99	6.19	3.90	5.78	6.69	9.22	4.99	5.34
4	ER1a	ExonRegion	0	9.85	5.72	9.97	8.56	9.81	11.29	5.90	5.59	2.55	9.00	8.81	6.52	4.52	11.67	3.28	28.50	11.85	35.54	12.34	10.88	12.39	11.79	29.79	4.31	7.87	12.71	9.74	7.33	12.94
5	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.17	3.44	0.00	9.25	0.00	0.00	0.00	0.00	0.00	0.00	1.93	3.35	0.00	3.64	3.60
6	E1a_E2a	KnownJunction	0	47.72	8.43	36.30	0.00	31.98	30.35	28.89	11.10	11.97	26.52	40.84	23.73	19.87	51.56	19.13	100.75	55.91	96.84	32.37	36.88	31.61	37.92	120.17	18.96	40.76	34.46	43.44	34.42	50.87
7	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.09	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
8	ER2a	ExonRegion	0	54.49	36.41	38.40	27.84	18.74	56.71	15.85	23.80	16.16	41.23	74.55	32.72	23.35	47.27	15.83	77.29	54.65	97.10	55.56	34.55	78.16	39.30	141.59	25.73	60.52	30.87	95.07	34.66	48.42
9	E2_Da	NovelBoundary	0	0.00	0.00	1.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.69	0.00	0.00	8.37	0.00	0.00	0.00	8.09	0.00	1.64	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E2a_E3a	KnownJunction	1	85.94	28.79	38.72	19.63	28.00	46.81	4.46	58.87	19.31	30.28	56.09	38.82	26.46	56.21	18.14	68.31	61.95	97.86	24.28	54.58	79.62	57.90	113.23	19.68	67.32	20.21	57.40	27.54	60.25
11	I2	Intron	0	1.27	1.75	0.77	0.93	0.70	1.81	0.44	0.48	2.21	1.31	0.74	0.77	0.07	1.75	1.90	4.54	2.93	2.05	2.77	1.80	2.70	0.10	0.63	0.47	1.30	0.64	1.06	0.85	0.67
12	I2_AR1	ActiveIntronRegion	0	2.03	2.06	1.25	0.00	0.87	2.14	0.36	1.19	2.76	2.37	0.73	1.40	0.17	1.48	2.51	8.15	3.28	2.10	2.31	1.58	2.44	0.05	0.65	0.58	1.53	1.24	1.32	1.39	0.29
13	I2_SR2	SilentIntronRegion	0	1.10	1.48	1.23	2.27	1.29	2.50	0.53	0.61	2.75	1.96	1.26	0.65	0.17	2.68	1.69	4.78	4.00	1.93	3.37	2.24	2.93	0.09	0.57	0.34	2.11	0.92	0.84	1.19	0.60
14	E3_Aa	NovelBoundary	0	2.71	0.00	1.05	0.00	0.00	5.45	4.58	0.00	4.69	5.47	0.00	0.00	0.00	2.10	0.00	14.38	0.00	4.62	0.00	0.00	0.00	2.24	0.00	0.00	3.33	0.00	4.72	2.07	0.00
15	ER3a	ExonRegion	0	56.05	31.23	43.69	40.63	37.36	45.65	19.45	28.51	12.54	28.04	57.21	28.91	17.68	60.23	25.56	85.42	63.32	82.48	49.28	46.91	65.82	41.02	104.95	23.94	59.25	37.48	54.52	36.27	38.00
16	E3_Da	NovelBoundary	0	16.87	8.63	1.25	8.63	0.00	4.53	2.92	2.04	4.66	1.84	1.61	1.54	6.81	5.85	8.37	7.65	10.38	0.00	16.18	11.16	13.96	2.48	4.73	13.64	4.77	0.00	0.00	3.68	14.66
17	E3a_E4a	KnownJunction	0	42.00	39.85	58.77	9.92	7.22	58.05	15.10	25.48	12.58	26.92	59.57	31.81	16.18	52.02	8.37	65.79	45.42	75.77	48.55	55.82	56.60	41.81	114.36	25.54	55.58	36.31	29.92	28.85	53.42
18	I3	Intron	0	1.53	2.49	0.40	0.43	2.32	2.37	2.16	0.22	3.27	2.06	2.62	1.03	0.42	0.81	4.05	5.37	4.53	3.95	7.98	1.38	4.41	0.11	1.18	2.05	1.78	0.65	3.70	0.39	0.24
19	I3_SR1	SilentIntronRegion	0	7.24	0.65	0.00	0.00	6.86	7.30	4.96	0.69	5.73	5.40	9.44	4.06	1.96	4.42	3.86	3.11	5.34	10.60	9.94	0.32	7.58	1.51	2.49	4.20	0.91	2.71	19.82	0.00	0.00
20	I3_AR1	ActiveIntronRegion	1	3.39	3.28	0.00	0.00	2.57	5.72	5.79	1.66	3.55	5.68	8.29	2.51	0.42	3.34	8.67	5.06	8.24	9.33	5.55	2.81	12.52	0.00	1.05	2.15	2.17	1.57	13.65	0.00	0.00
21	I3_SR2	SilentIntronRegion	0	1.01	2.62	0.45	0.48	1.97	1.86	1.80	0.12	3.09	1.66	1.86	0.73	0.30	0.42	3.91	5.61	4.34	3.23	7.96	1.42	3.86	0.00	1.09	1.89	1.84	0.45	2.03	0.44	0.27
22	E4_Aa	NovelBoundary	0	2.71	0.00	0.00	9.71	7.37	1.96	0.00	0.00	2.44	7.87	1.52	1.51	1.56	3.35	9.97	6.66	12.09	0.00	0.00	0.00	7.86	0.00	0.00	2.87	0.00	1.89	0.00	2.29	0.00
23	ER4a	ExonRegion	1	42.59	29.38	58.88	39.46	35.84	42.49	13.18	33.22	13.62	37.55	53.51	31.41	17.12	54.59	20.83	89.03	56.74	108.54	48.48	43.65	50.60	44.93	142.73	27.35	60.34	49.01	67.00	36.56	42.38
24	E4a_E5a	KnownJunction	1	36.45	30.25	52.10	77.65	27.41	27.85	7.32	20.30	9.68	19.53	47.07	22.53	7.87	48.86	36.87	91.03	62.94	65.37	72.83	40.94	52.95	35.39	139.97	31.16	72.21	44.16	74.10	38.15	32.85
25	E5_Aa	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	1.48	0.00	1.13	0.00	3.37	0.90	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	0	47.55	35.44	69.04	48.57	27.01	32.59	19.41	41.18	15.99	26.77	49.09	26.85	14.02	58.06	43.21	93.34	63.56	112.48	55.08	44.52	53.81	55.84	137.50	29.67	69.20	60.95	57.81	40.47	51.52
27	E5_Da	NovelBoundary	0	3.01	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55
28	E5a_E6a	KnownJunction	0	58.87	46.15	91.19	75.71	34.34	17.42	24.32	35.78	17.02	43.34	69.98	38.13	24.17	52.27	86.11	83.61	74.89	138.83	97.11	52.35	60.17	49.40	178.58	23.75	84.18	51.37	61.48	41.97	62.96
29	ER6a	ExonRegion	0	45.77	39.70	75.42	62.56	28.08	37.49	20.01	42.56	17.21	27.90	52.25	33.50	17.67	61.07	38.96	96.82	64.32	106.44	57.16	45.80	51.12	57.78	127.29	32.57	57.19	52.62	54.09	45.19	52.75
30	E6_Da	NovelBoundary	0	2.24	0.00	0.95	0.00	0.00	1.69	0.00	0.00	0.00	0.00	0.00	1.51	0.00	0.93	0.00	7.04	3.13	0.00	0.00	3.31	1.97	0.00	2.22	0.00	0.00	2.19	0.00	0.00	0.00
31	E6a_E7a	KnownJunction	0	38.22	61.27	92.04	79.59	14.74	32.23	13.27	33.64	20.74	25.05	43.05	25.48	15.16	37.27	50.03	91.65	69.24	42.77	32.37	59.13	45.45	35.78	130.22	29.25	40.65	58.84	34.69	15.59	23.47
32	I6	Intron	0	2.00	2.18	0.42	3.27	1.21	3.30	0.33	0.50	2.13	1.41	0.91	0.93	0.13	1.40	2.43	6.18	3.59	5.30	3.37	0.94	4.17	0.30	0.34	0.80	1.69	0.59	0.99	1.05	1.15
33	I6_SR1	SilentIntronRegion	0	2.00	2.18	0.42	3.27	1.21	3.30	0.33	0.50	2.14	1.41	0.91	0.94	0.13	1.41	2.44	6.19	3.59	5.30	3.38	0.94	4.17	0.30	0.34	0.80	1.69	0.59	0.99	1.05	1.15
34	E7_Aa	NovelBoundary	0	2.89	0.00	1.42	0.00	0.00	1.80	0.00	0.00	1.43	1.96	0.00	1.27	0.00	2.42	8.57	35.19	8.87	9.25	0.00	3.23	7.78	0.00	0.00	0.00	5.19	0.00	0.00	4.36	4.79
35	ER7a	ExonRegion	0	40.77	42.22	86.21	101.19	60.13	41.62	24.15	48.67	21.38	31.32	58.56	40.85	20.01	51.82	38.73	90.30	66.90	95.10	70.50	37.65	54.89	51.35	135.28	31.10	57.40	59.62	63.94	36.23	54.57
36	E7a_E8a	KnownJunction	1	28.02	30.05	74.69	48.53	35.07	21.45	13.33	46.53	15.96	16.42	23.63	47.92	27.55	43.80	43.65	82.70	51.61	80.14	16.18	45.07	38.99	18.52	86.43	19.68	29.51	42.70	52.88	50.50	51.83
37	E8_Aa	NovelBoundary	0	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.37	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.70	0.00	0.00	0.00	0.00
38	ER8a	ExonRegion	0	22.05	29.64	63.90	51.82	28.51	24.84	20.53	28.89	16.96	20.40	40.85	32.24	18.14	34.78	34.77	62.81	49.67	58.93	33.07	24.48	38.85	20.37	99.73	21.84	37.03	38.54	59.35	19.51	35.38
39	E8_Da	NovelBoundary	0	4.84	0.00	0.95	0.00	0.00	1.96	0.00	0.00	3.17	0.00	0.00	3.73	0.00	4.32	0.00	0.00	0.00	13.87	8.09	0.00	4.09	0.00	6.30	2.51	0.00	0.00	0.00	2.29	0.00
40	E8a_E9a	KnownJunction	0	38.75	61.08	62.81	112.59	28.00	43.20	32.04	37.52	45.28	24.65	50.93	35.60	38.25	76.53	74.55	106.10	73.94	85.02	80.92	34.82	47.57	29.95	136.72	58.14	60.73	56.48	123.00	23.68	74.02
41	E9_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.69	0.00	0.00	0.00	0.00	0.00	1.78	0.00	6.12	0.00	2.75	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	1.67	4.38	0.00	0.00	0.00
42	ER9a	ExonRegion	0	24.89	37.97	78.88	87.17	58.21	34.61	19.35	23.84	25.60	14.83	34.29	24.89	22.71	39.47	35.22	56.49	45.58	42.00	37.10	21.47	39.45	26.74	73.77	26.45	49.95	29.43	60.57	16.63	39.31
43	E9_Da	NovelBoundary	0	0.00	14.15	1.02	0.00	0.00	0.00	2.29	0.00	1.89	1.72	0.00	1.87	0.00	0.00	0.00	7.65	2.57	9.25	16.18	4.13	3.45	2.43	2.51	2.45	0.00	0.00	7.60	0.00	2.77
44	E9a_E10a	KnownJunction	0	33.50	57.10	56.16	28.47	46.72	33.53	29.01	31.50	51.83	29.96	64.63	24.40	35.35	59.56	69.76	98.91	56.36	57.02	72.83	43.25	70.15	29.71	123.37	27.63	52.74	47.94	80.46	31.77	58.83
45	Ix	Intron	0	3.10	3.16	0.58	3.21	0.73	3.08	1.51	0.37	2.68	1.87	1.48	0.55	0.77	1.87	1.84	8.74	5.35	5.79	11.62	1.57	4.83	0.00	0.45	0.86	0.78	1.49	2.46	2.60	0.43
46	Ix_SR1	SilentIntronRegion	0	3.40	2.45	0.11	6.39	1.09	2.14	1.42	1.08	2.07	1.61	1.48	0.28	0.12	1.85	2.05	8.09	5.22	8.02	9.96	1.49	3.92	0.00	0.00	0.48	1.50	1.42	6.93	3.94	1.04
47	Ix_AR1	ActiveIntronRegion	0	4.49	2.76	0.69	3.18	0.54	2.45	1.98	0.28	2.91	2.48	1.07	0.95	1.19	1.53	2.05	6.67	4.06	5.88	10.74	2.30	4.53	0.00	0.60	0.93	0.52	2.43	1.80	3.19	0.22
48	Ix_SR2	SilentIntronRegion	0	0.98	4.23	0.77	1.10	0.75	4.62	0.93	0.00	2.80	1.21	2.06	0.21	0.64	2.35	1.41	12.11	7.26	4.16	14.03	0.62	5.90	0.00	0.55	1.02	0.66	0.24	0.33	0.87	0.31
49	E10_Aa	NovelBoundary	0	0.00	19.39	3.09	36.67	7.37	0.00	5.26	0.00	3.93	6.11	0.00	4.76	0.00	0.00	0.00	9.87	18.77	0.00	40.46	0.00	3.45	0.00	2.17	2.81	1.78	0.00	0.00	0.00	0.00
50	ER10a	ExonRegion	0	13.70	39.27	17.40	27.63	29.18	37.97	14.17	10.43	39.33	28.94	36.26	20.77	12.92	32.17	36.18	71.93	41.61	41.82	62.45	24.24	57.17	10.04	42.06	39.38	33.44	19.04	56.62	15.68	29.80