Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF117	Gene	0	34.47	37.46	14.52	24.63	19.22	35.80	9.78	36.21	15.10	30.69	13.60	26.85	2.11	76.51	47.29	148.41	57.22	42.62	54.96	157.04	58.36	10.35	8.21	26.50	49.54	16.80	24.39	27.00	19.33
2	487644	Transcript	0	17.42	6.66	18.49	60.45	28.13	12.10	19.83	20.94	4.35	7.58	4.87	9.10	2.03	12.91	19.97	35.03	12.70	11.22	12.49	50.87	10.89	11.03	3.08	3.16	12.13	9.22	13.10	16.22	7.49
3	282869	Transcript	0	48.63	59.73	9.06	35.19	31.31	61.03	12.70	44.42	22.08	52.91	21.46	47.89	3.28	114.18	71.53	249.60	94.48	65.45	101.35	256.22	98.29	10.53	8.95	41.01	91.54	20.94	32.42	31.54	34.19
4	398695	Transcript	0	52.56	72.59	9.05	31.21	42.64	53.73	11.13	52.54	31.30	47.32	15.97	46.41	7.10	119.64	100.96	192.78	120.44	36.38	68.37	237.87	102.25	17.05	11.53	64.33	88.57	23.29	35.70	38.91	30.54
5	ER1a	ExonRegion	0	40.29	14.83	52.54	142.19	81.30	19.07	50.88	51.77	11.71	17.16	13.07	22.83	2.74	23.13	25.09	93.02	31.75	22.42	21.06	98.08	21.88	27.15	6.91	2.67	22.09	24.81	38.27	45.61	21.34
6	E1a_E3a	KnownJunction	0	5.96	0.00	2.07	31.71	0.00	13.20	5.61	9.60	0.00	3.36	0.00	1.84	3.25	6.89	16.94	0.00	0.97	4.62	8.09	24.07	0.00	4.86	2.07	2.21	9.85	2.19	0.00	0.00	0.00
7	Ix	Intron	0	17.42	14.45	9.03	28.29	5.69	14.60	12.65	9.07	13.69	17.89	7.00	13.47	2.11	12.99	19.82	18.97	39.05	20.57	9.47	26.42	8.76	1.91	1.63	10.08	11.32	5.91	3.54	12.86	6.09
8	Ix_AR1	ActiveIntronRegion	0	14.20	17.49	7.58	36.08	5.67	15.78	17.77	9.47	16.42	15.07	9.22	13.55	2.74	8.97	18.90	15.06	30.71	18.99	12.10	28.12	10.14	2.52	2.62	9.17	9.77	4.22	2.02	13.03	4.96
9	Ix_SR1	SilentIntronRegion	0	20.58	12.15	10.48	22.23	5.84	13.91	8.53	8.92	11.66	20.71	5.24	13.71	1.61	16.74	21.06	22.75	47.09	22.38	7.43	25.55	7.77	1.43	0.81	11.09	12.89	7.49	4.93	13.01	7.19
10	E2_Aa	NovelBoundary	1	55.98	57.30	56.91	71.61	6.93	43.32	5.21	73.40	50.86	119.40	58.21	25.63	6.97	122.77	25.91	269.20	82.47	61.13	16.18	117.85	94.10	25.52	33.15	74.11	75.35	51.50	81.75	187.00	84.25
11	ER2a	ExonRegion	1	37.81	35.45	24.60	13.88	4.75	23.16	5.48	40.73	18.77	40.47	14.44	16.74	0.79	89.27	30.41	129.40	52.71	50.57	37.61	89.40	50.46	14.25	16.38	27.92	40.79	23.81	31.36	44.68	26.13
12	E2a_E3a	KnownJunction	0	47.84	32.58	15.82	10.78	6.34	29.47	9.84	88.04	2.59	22.05	22.52	31.38	1.53	93.63	53.22	140.76	49.81	41.61	32.37	106.76	41.88	7.73	13.40	31.40	34.44	15.49	9.00	34.46	10.30
13	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.49
14	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	1.68	0.00	0.00	0.00	2.42	0.00	0.00	2.68	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER3a	ExonRegion	0	82.31	49.59	22.73	15.18	8.65	57.13	12.64	142.28	13.61	42.47	27.28	45.98	1.36	138.36	74.11	251.07	89.09	75.84	83.71	344.49	77.22	27.37	12.82	35.19	97.39	36.44	32.58	43.78	23.73
16	E3a_E4a	KnownJunction	0	81.81	42.17	39.96	36.24	19.60	67.83	14.30	127.60	14.07	28.08	24.61	48.61	1.21	124.61	102.85	218.79	96.81	71.92	72.83	309.21	69.59	12.06	17.19	61.25	114.49	34.20	47.46	56.66	17.56
17	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4a	ExonRegion	0	77.34	43.15	71.79	25.21	75.76	60.64	27.70	101.66	15.37	37.67	26.79	42.65	4.68	143.53	62.42	224.63	96.96	65.41	60.96	331.57	90.62	22.85	10.81	45.26	87.68	25.60	35.79	47.70	18.19
19	E4_Da	KnownBoundary	0	3.01	0.00	3.94	8.63	6.04	1.69	5.61	2.54	0.00	0.00	0.00	0.00	0.00	10.48	0.00	6.58	2.18	9.25	24.28	18.77	1.64	0.00	0.00	3.05	3.37	0.00	0.00	6.78	1.65
20	E4a_E5a	KnownJunction	0	60.05	51.29	57.18	40.12	98.30	80.30	13.10	66.94	17.66	49.49	40.52	42.14	0.00	116.10	70.76	301.94	70.88	79.76	56.65	352.30	94.14	22.90	6.50	25.00	69.22	29.52	19.63	32.67	26.05
21	ER4b	ExonRegion	0	6.00	5.15	0.84	7.45	3.10	4.01	3.00	1.44	1.33	2.21	1.53	2.64	0.11	8.71	17.88	12.06	5.40	6.61	8.32	30.46	10.80	1.07	0.25	4.60	4.45	0.66	1.02	3.05	1.12
22	E4_Db	NovelBoundary	0	10.44	4.46	0.00	0.00	0.00	8.90	0.00	0.00	2.74	1.96	0.00	2.74	0.00	3.46	7.77	17.75	3.29	0.00	8.09	7.03	7.42	0.00	0.00	0.00	9.51	0.00	0.00	2.29	0.00
23	I4	Intron	0	3.96	3.40	0.22	1.89	1.29	3.09	1.33	0.49	1.63	1.53	0.63	1.55	0.00	2.39	1.94	17.48	1.58	2.80	4.22	9.52	5.28	0.00	0.48	0.85	1.32	0.42	0.00	0.43	1.76
24	I4_SR1	SilentIntronRegion	0	4.00	3.46	0.22	1.92	1.31	3.14	1.35	0.49	1.66	1.55	0.64	1.57	0.00	2.43	1.97	17.72	1.60	2.84	4.29	9.63	5.36	0.00	0.49	0.87	1.34	0.42	0.00	0.44	1.79
25	E5_Aa	NovelBoundary	0	8.55	4.36	1.54	10.78	0.00	0.00	0.00	0.00	1.52	3.79	0.00	0.00	0.00	5.58	8.37	13.85	1.15	0.00	7.87	11.99	14.44	0.00	0.00	2.45	0.00	0.00	0.00	1.93	0.00
26	ER5a	ExonRegion	0	53.10	66.46	18.84	40.97	31.86	77.72	14.45	54.05	26.84	44.65	23.42	49.09	3.56	129.39	67.20	303.69	101.52	68.67	104.53	312.76	113.23	13.70	11.23	35.82	79.83	24.97	34.10	32.77	23.64
27	E5_Da	KnownBoundary	0	145.16	160.45	40.81	147.32	99.62	170.81	153.11	82.81	120.71	158.42	73.58	126.32	70.92	275.25	194.34	383.11	321.32	90.54	185.68	511.25	246.24	57.95	33.83	162.58	243.07	88.88	106.30	137.45	148.76
28	E5a_E6a	KnownJunction	0	67.07	73.88	11.41	37.53	43.03	56.21	10.47	59.82	40.68	54.85	18.60	36.14	5.48	138.63	73.15	216.57	142.64	22.99	40.24	235.11	134.09	21.73	17.73	61.85	83.99	24.38	19.38	48.12	29.32
29	ER5b	ExonRegion	0	48.63	59.73	9.06	35.19	31.31	61.03	12.70	44.42	22.08	52.91	21.46	47.89	3.28	114.18	71.53	249.60	94.48	65.45	101.35	256.22	98.29	10.53	8.95	41.01	91.54	20.94	32.42	31.54	34.19
30	E5_Db	NovelBoundary	0	32.91	61.27	5.11	29.98	47.45	91.43	13.39	39.61	30.76	55.80	6.01	51.60	0.00	116.43	118.79	270.27	96.72	81.68	48.55	316.41	118.25	6.66	9.31	40.32	60.31	15.92	25.15	22.42	25.92
31	E6_Aa	NovelBoundary	0	16.63	67.96	5.16	0.00	7.37	78.77	19.68	39.02	26.83	61.52	32.90	33.73	17.48	90.80	105.24	179.54	100.93	32.36	64.74	247.52	71.40	12.15	10.00	56.17	58.31	9.10	67.74	30.69	39.65
32	ER6a	ExonRegion	0	38.05	71.30	6.69	24.89	42.25	51.25	11.80	45.27	21.91	39.79	13.33	56.67	8.72	100.64	128.78	168.98	98.23	49.76	96.51	240.63	70.41	12.38	5.32	66.82	93.15	22.21	52.01	29.69	31.76
33	IG17_AR11	ActiveIntergenicRegion	0	16.18	51.71	12.37	26.26	21.45	32.62	4.96	27.66	22.20	20.23	8.81	36.48	2.89	34.26	107.48	151.09	40.06	30.60	84.17	223.13	60.99	6.11	4.32	37.11	34.69	15.13	27.81	13.94	24.82
34	IG17_AR10	ActiveIntergenicRegion	0	20.11	46.49	2.43	17.60	28.75	49.97	7.66	12.14	20.36	14.09	5.25	30.66	2.06	35.35	105.95	151.79	26.83	30.13	83.04	173.42	69.69	1.56	3.06	58.91	29.82	3.63	28.67	5.65	19.71
35	IG17_AR9	ActiveIntergenicRegion	0	8.37	28.60	0.96	11.43	12.43	25.92	6.06	8.28	15.11	8.48	1.64	14.71	3.61	17.69	53.48	86.07	18.07	16.92	49.30	94.83	33.87	3.40	2.08	22.73	13.36	4.37	8.57	3.32	9.99
36	IG17_SR6	SilentIntergenicRegion	0	1.12	4.96	0.11	2.78	5.64	6.21	2.39	1.53	3.72	2.62	1.66	7.15	1.06	4.43	10.56	14.56	7.66	2.87	17.22	20.41	13.47	0.28	0.28	4.78	4.51	1.17	6.71	3.48	3.35
37	IG17_AR8	ActiveIntergenicRegion	0	3.63	6.54	0.36	2.76	4.60	7.00	2.75	3.33	4.07	3.63	1.54	8.96	0.57	3.70	15.70	18.27	6.78	2.38	10.28	20.61	9.47	1.92	0.62	6.88	5.51	0.83	8.80	2.53	3.50
38	IG17_SR2	SilentIntergenicRegion	0	2.04	1.54	0.00	0.00	0.00	2.29	0.96	0.00	2.40	1.03	0.00	1.62	0.00	0.43	2.62	1.18	2.85	0.99	6.09	1.97	0.34	0.00	0.00	0.00	0.00	1.12	0.00	0.00	0.00
39	IG17_AR2	ActiveIntergenicRegion	0	0.60	1.22	0.00	1.40	0.95	1.61	2.28	0.54	0.46	1.18	0.00	1.26	0.82	1.55	1.90	0.97	3.18	0.60	1.25	1.00	1.25	0.00	0.35	0.84	0.27	0.15	1.07	0.16	0.78
40	IG17_AR1	ActiveIntergenicRegion	0	0.00	2.45	1.27	5.46	3.72	5.22	1.53	0.70	2.78	10.44	2.26	6.10	0.00	1.20	5.93	6.61	3.41	1.47	55.93	6.73	5.43	0.00	0.69	1.64	0.54	1.79	0.00	0.62	0.76