Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	MRPL18	Gene	0	349.42	317.43	269.92	725.71	530.03	377.17	801.04	476.12	352.47	301.19	222.74	290.74	284.63	132.14	606.92	296.19	136.03	301.49	474.21	655.61	497.86	811.14	588.75	276.71	292.45	203.75	324.45	351.94	491.15
2	476826	Transcript	0	4.58	0.79	7.39	32.11	64.10	7.04	25.98	7.75	2.61	1.74	4.43	2.39	11.74	0.96	8.72	4.71	1.94	14.92	12.17	4.16	11.44	11.83	16.11	2.90	2.85	4.85	5.11	7.41	8.59
3	479638	Transcript	0	25.42	16.18	22.75	83.97	91.94	21.81	49.30	22.11	7.90	19.54	3.71	12.37	14.79	4.70	24.55	33.87	5.30	23.59	31.25	40.88	27.46	39.81	30.84	10.21	10.17	17.48	15.20	22.95	19.65
4	367034	Transcript	0	454.09	156.98	192.70	1203.87	532.20	415.17	1065.74	569.68	314.25	224.16	72.91	174.24	164.83	89.53	380.83	409.20	64.84	348.56	281.20	521.08	853.30	1318.78	574.95	186.54	148.40	213.13	180.02	311.65	248.13
5	480842	Transcript	0	0.07	0.00	0.35	0.00	0.00	4.74	2.78	1.90	3.18	1.99	0.00	0.68	1.34	0.94	0.00	10.91	0.10	7.53	0.16	0.00	13.67	5.53	0.00	0.22	1.38	0.00	0.06	1.69	0.23
6	ER1a	ExonRegion	0	6.63	1.58	7.45	53.43	65.56	6.91	27.36	12.96	3.97	1.44	8.85	1.95	8.30	1.06	7.47	5.60	1.27	20.60	8.15	8.32	13.41	11.47	20.54	5.79	3.77	5.85	1.93	12.52	6.39
7	E1_Ab	NovelBoundary	0	0.00	0.00	1.07	0.00	13.26	3.53	8.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.04	6.80	0.00	0.00	4.38	0.00	2.29	0.00
8	E1_Da	NovelBoundary	0	0.00	0.00	2.19	37.31	90.93	5.91	0.00	10.80	1.16	1.52	5.16	1.20	8.22	1.73	38.27	8.72	3.06	4.62	16.18	3.31	6.82	4.28	13.15	0.00	0.00	2.02	2.04	2.11	14.79
9	E1a_E2c	NovelJunction	0	0.00	0.00	1.17	0.00	0.00	0.00	0.00	0.00	1.71	0.00	0.00	0.00	0.00	0.00	9.97	0.00	1.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.74	0.00
10	E1a_E3a	KnownJunction	0	2.54	0.00	7.32	10.78	62.63	7.17	24.60	2.54	1.25	2.04	0.00	2.83	15.19	0.86	9.97	3.82	2.61	9.25	16.18	0.00	9.47	12.20	11.67	0.00	1.93	3.86	8.30	2.29	10.80
11	ER1b	ExonRegion	1	11.79	1.64	10.10	54.84	72.23	11.00	34.27	10.13	3.37	5.05	1.19	3.71	18.19	2.72	8.40	8.86	3.01	12.28	11.31	0.00	27.81	25.24	17.18	2.15	2.14	3.14	7.33	4.89	10.74
12	ER1c	ExonRegion	0	50.83	32.35	44.18	167.94	183.88	43.61	98.61	44.22	15.81	35.20	7.41	22.87	29.58	9.39	49.10	67.74	10.61	47.19	62.49	81.75	54.92	79.61	61.67	20.41	20.34	34.95	30.40	35.35	39.30
13	E1_Db	NovelBoundary	0	0.00	4.36	1.40	0.00	14.15	0.00	0.00	0.00	1.55	0.00	0.00	3.55	0.00	0.00	0.00	0.00	0.00	4.62	0.00	9.43	0.00	0.00	7.44	0.00	0.00	0.00	2.29	4.13	3.63
14	E1b_E2c	KnownJunction	0	0.00	0.00	1.32	0.00	0.00	0.00	0.00	0.00	0.00	3.87	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.56	0.00
15	E1b_E3a	NovelJunction	0	53.68	22.10	52.37	116.47	221.50	20.49	80.84	41.90	11.82	14.78	12.94	14.55	42.32	14.09	34.08	17.67	4.95	19.26	48.55	96.34	52.38	68.94	44.03	22.67	11.10	22.27	36.58	29.07	84.12
16	I1	Intron	0	2.43	1.22	2.53	2.71	3.08	3.81	1.52	0.00	2.54	4.18	0.60	2.41	0.65	1.08	3.13	0.94	1.13	1.46	3.62	6.89	1.80	3.18	2.50	2.17	1.98	0.20	1.15	0.62	1.94
17	I1_AR1	ActiveIntronRegion	0	2.40	1.75	2.99	2.37	3.08	4.99	1.79	0.00	3.24	5.71	0.65	3.12	0.94	1.39	4.23	0.90	1.20	1.63	3.80	8.57	2.59	4.09	2.73	2.34	2.75	0.29	1.66	0.64	2.70
18	I1_SR1	SilentIntronRegion	0	2.57	0.00	1.51	3.57	3.13	1.15	0.93	0.00	0.98	0.74	0.50	0.82	0.00	0.38	0.65	1.05	0.99	1.08	3.29	3.16	0.00	1.15	2.02	1.81	0.22	0.00	0.00	0.55	0.22
19	E2_Aa	NovelBoundary	0	29.14	7.66	20.08	202.10	130.13	37.52	124.90	35.93	32.13	63.83	7.56	24.01	22.58	7.44	41.26	90.27	6.60	84.76	64.74	72.53	51.46	70.25	87.42	16.81	25.00	32.92	40.75	71.08	55.30
20	ER2a	ExonRegion	0	329.77	194.13	364.48	2201.11	903.77	607.50	1756.73	438.57	301.64	319.30	125.83	272.33	216.99	85.58	521.07	552.33	96.40	520.27	481.48	471.87	1055.69	1006.34	1009.64	123.65	149.50	339.11	303.44	537.16	323.46
21	E2_Ab	KnownBoundary	0	654.21	325.95	858.49	4319.45	1504.51	1188.28	3221.65	864.18	716.61	651.91	227.58	476.23	429.80	155.38	540.95	1009.94	230.02	209.47	250.64	681.85	2114.06	1973.09	1924.19	232.44	261.60	557.11	488.82	811.19	691.47
22	ER2b	ExonRegion	0	282.27	109.02	385.74	877.10	475.41	299.03	630.29	339.00	171.16	161.95	82.56	123.77	144.93	70.51	238.03	207.64	93.64	161.71	139.48	326.68	482.55	776.39	426.44	109.73	104.83	166.34	116.93	202.85	320.91
23	E2_Da	KnownBoundary	0	0.00	0.00	1.20	0.00	0.00	1.50	0.00	0.00	2.31	0.00	0.00	0.00	0.00	0.00	0.00	20.96	0.00	0.00	0.00	3.80	3.93	4.42	0.00	0.00	1.89	0.00	0.00	4.31	0.00
24	E2a_E3a	KnownJunction	0	578.41	119.83	20.93	206.63	160.63	222.84	374.76	700.80	326.85	129.02	19.99	76.14	112.67	93.48	240.58	266.06	33.29	176.85	80.92	570.29	650.91	1631.21	140.26	249.43	147.30	87.16	56.61	86.13	172.79
25	E2a_E4a	NovelJunction	0	2.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	7.33	5.26	2.54	3.14	3.91	0.00	0.00	1.91	1.13	0.00	0.00	0.00	18.49	0.00	0.00	20.86	4.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER2c	ExonRegion	0	0.07	0.00	0.35	0.00	0.00	4.74	2.78	1.90	3.18	1.99	0.00	0.68	1.34	0.94	0.00	10.91	0.10	7.53	0.16	0.00	13.67	5.53	0.00	0.22	1.38	0.00	0.06	1.69	0.23
28	ER2d	ExonRegion	0	2.94	5.82	3.55	0.00	0.00	2.97	3.29	1.39	6.72	8.14	3.17	7.39	2.64	0.42	14.17	1.51	1.06	4.79	1.41	0.14	6.64	4.71	1.95	0.05	0.68	1.40	0.03	8.22	1.96
29	E2_Db	NovelBoundary	0	0.00	0.00	2.57	10.57	0.00	1.96	0.00	0.00	0.00	3.91	0.00	1.39	5.22	0.95	0.00	3.82	1.15	0.00	16.18	0.00	2.97	0.00	0.00	0.00	5.23	0.00	0.00	6.25	0.00
30	E2b_E3a	KnownJunction	0	0.00	4.85	5.18	0.00	0.00	0.00	7.50	0.00	4.75	9.83	4.56	9.40	0.00	2.22	24.91	0.00	3.15	0.00	0.00	0.00	1.68	0.00	2.51	0.00	0.00	0.00	0.00	12.36	0.00
31	I2	Intron	0	2.88	0.00	1.12	7.22	0.00	6.00	2.03	3.71	1.51	2.91	2.00	2.90	0.44	0.00	0.00	3.93	0.50	4.09	5.36	0.92	6.22	10.28	2.43	0.00	2.88	3.16	3.07	6.02	0.45
32	I2_AR1	ActiveIntronRegion	0	2.92	0.00	1.14	7.31	0.00	6.08	2.06	3.76	1.53	2.95	2.02	2.94	0.44	0.00	0.00	3.98	0.51	4.15	5.43	0.94	6.30	10.42	2.46	0.00	2.92	3.21	3.11	6.10	0.46
33	E3_Aa	NovelBoundary	0	5.49	0.00	3.36	0.00	14.74	3.84	0.00	0.00	1.28	4.75	0.00	2.53	1.75	2.84	0.00	9.64	1.94	0.00	0.00	0.00	3.77	8.46	3.74	0.00	1.86	0.00	3.78	0.00	2.64
34	ER3a	ExonRegion	0	540.88	315.83	381.11	555.37	472.21	708.13	1685.44	745.46	423.31	516.92	297.36	399.02	399.27	180.61	805.98	541.20	196.81	489.48	555.66	944.63	888.59	1330.09	1137.37	297.35	384.78	444.13	471.30	696.27	702.49
35	E3_Da	NovelBoundary	0	13.45	7.56	7.15	28.47	13.41	3.80	0.00	0.00	0.00	3.60	3.16	1.42	1.56	3.15	0.00	3.60	5.69	13.87	8.09	3.89	9.35	6.95	1.97	0.00	1.63	0.00	0.00	6.29	7.63
36	E3a_E4a	KnownJunction	0	460.97	277.96	1064.09	2254.41	1508.35	393.15	1376.19	782.97	430.99	481.94	296.99	428.34	438.24	213.90	942.38	372.24	228.85	410.33	525.56	849.82	550.07	967.24	845.37	325.99	454.77	289.67	481.27	670.24	815.04
37	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.52	0.00	1.67	0.00	0.00	0.00	0.00	0.00	0.00	3.75	1.40	4.62	0.00	0.00	3.65	0.00	2.27	0.00	0.00	0.00	0.00	2.16	1.32
38	I3	Intron	0	4.28	8.21	1.59	3.18	2.32	8.54	3.38	0.99	4.08	5.08	2.53	4.77	1.56	2.17	8.51	8.74	6.35	12.28	15.08	4.10	8.63	0.40	0.69	3.88	2.22	0.90	3.13	2.89	2.71
39	I3_AR1	ActiveIntronRegion	0	6.43	7.73	2.34	2.87	0.98	3.85	2.42	2.21	0.90	4.62	2.62	3.58	1.03	2.27	10.50	5.32	4.48	12.52	7.03	4.25	3.14	1.08	1.81	1.29	1.72	1.57	0.73	4.56	2.81
40	I3_SR1	SilentIntronRegion	0	3.88	8.32	1.45	3.25	2.58	9.45	3.57	0.76	4.69	5.17	2.51	5.00	1.66	2.15	8.15	9.40	6.71	12.26	16.63	4.08	9.69	0.27	0.48	4.38	2.32	0.77	3.59	2.58	2.70
41	E4_Aa	NovelBoundary	0	7.61	0.00	4.21	0.00	0.00	9.90	5.38	0.00	4.54	7.71	0.00	7.44	8.53	4.96	7.97	16.91	11.32	14.64	24.05	0.00	9.59	2.04	0.00	10.71	3.86	0.00	2.14	14.74	2.74
42	ER4a	ExonRegion	0	696.10	411.31	741.01	2444.97	1713.61	574.61	1203.20	1109.44	480.56	465.11	396.85	535.28	450.78	239.50	962.02	396.98	226.56	466.29	666.83	1053.67	708.13	1578.62	890.80	502.27	553.38	314.75	579.77	543.36	738.27
43	E4_Da	KnownBoundary	0	817.89	670.80	360.54	1684.34	1193.86	645.65	1340.31	1005.87	580.00	681.95	601.47	558.33	471.65	264.70	1337.43	680.69	225.34	547.75	1269.62	1375.20	807.86	1600.92	1128.31	565.26	711.94	390.13	710.72	502.29	803.32
44	ER4b	ExonRegion	0	750.54	621.80	368.94	969.50	838.69	597.71	1328.86	1246.70	596.50	598.14	485.08	617.39	523.01	283.93	1156.18	485.99	295.90	541.64	930.57	1162.93	717.58	1817.38	1148.05	528.63	633.96	434.03	651.48	703.99	1030.81
45	E4_Db	NovelBoundary	0	10.15	13.48	2.96	0.00	0.00	5.41	10.87	4.48	9.47	3.32	0.00	4.67	1.50	2.22	50.43	18.05	10.80	18.49	32.37	2.98	12.63	9.92	6.85	10.05	5.42	3.78	4.27	0.00	12.48
46	E4b_E5a	KnownJunction	0	454.78	550.87	486.84	719.55	653.44	543.36	1455.09	807.45	476.09	607.61	456.99	638.75	562.59	236.81	1311.52	436.73	260.70	466.33	1099.90	1013.15	653.48	1012.36	1052.91	400.76	441.63	347.91	546.52	548.79	1046.26
47	I4	Intron	0	6.25	9.97	0.00	2.61	4.45	6.76	4.04	1.01	7.35	5.52	1.73	5.84	0.71	2.63	7.88	12.85	4.62	8.60	16.29	5.24	6.50	1.31	0.66	10.58	2.60	0.29	0.00	2.38	0.73
48	I4_AR1	ActiveIntronRegion	0	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	I4_AR2	ActiveIntronRegion	0	7.64	0.00	0.00	0.00	3.47	0.00	0.00	1.76	0.00	0.00	1.76	3.07	0.00	0.00	3.90	5.72	0.00	4.27	6.10	0.00	6.64	1.18	0.00	1.50	0.00	0.00	0.00	2.69	0.00
50	I4_SR1	SilentIntronRegion	0	6.98	0.00	0.00	0.00	4.84	0.00	0.00	1.53	0.00	0.00	2.31	3.39	0.00	0.00	4.16	7.09	0.00	8.42	5.30	0.00	4.97	1.85	0.00	2.15	0.00	0.00	0.00	2.98	0.00
51	I4_AR3	ActiveIntronRegion	0	6.16	13.11	0.00	3.43	4.68	8.89	5.31	0.88	9.66	7.26	1.71	6.79	0.93	3.46	9.26	15.11	6.08	9.46	19.89	6.89	6.83	1.29	0.87	13.39	3.42	0.38	0.00	2.34	0.96
52	E5_Aa	NovelBoundary	0	2.54	13.57	0.00	9.06	0.00	6.64	17.11	8.51	13.46	6.95	0.00	6.14	0.00	7.09	9.97	22.18	11.95	13.87	40.46	19.10	10.67	4.38	6.60	11.19	6.74	0.00	4.08	4.22	0.00
53	ER5a	ExonRegion	0	502.17	737.80	264.53	607.42	462.47	584.77	1021.54	601.65	754.82	486.88	429.16	518.28	544.80	243.42	1148.81	451.32	243.55	468.78	981.26	1208.64	731.68	1083.32	822.37	569.96	522.04	226.05	564.37	490.66	904.57
54	E5_Da	KnownBoundary	0	245.56	436.57	338.32	401.19	295.92	190.03	295.00	139.34	408.03	207.16	140.30	220.93	285.23	93.04	686.46	228.81	68.07	197.40	501.73	466.42	254.78	366.28	253.09	267.61	215.04	32.31	258.43	119.34	378.93
55	ER5b	ExonRegion	0	153.16	283.86	214.97	661.47	648.98	166.15	303.67	94.40	345.76	189.25	139.57	175.35	212.09	70.61	574.31	153.84	60.77	212.74	428.19	586.61	291.57	218.89	231.30	262.07	254.83	54.52	260.21	163.08	316.01
56	IG34_AR1	ActiveIntergenicRegion	0	0.68	1.37	1.24	3.80	3.11	3.36	1.50	0.78	6.71	2.90	3.66	1.44	3.42	2.11	6.05	3.54	1.90	1.70	5.08	4.65	6.13	3.63	1.92	2.74	1.36	0.34	6.41	3.28	2.29