Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP11-445F6.2	Gene	0	198.78	33.89	17.64	499.24	0.00	123.04	10.35	58.56	31.05	2.74	173.91	3.51	16.22	54.12	212.58	28.98	46.89	90.76	104.64	184.68	82.93	25.15	129.25	79.47	286.73	112.43	58.16	181.64	1.27
2	441249	Transcript	0	317.09	54.51	26.47	991.73	0.00	242.96	19.10	110.11	60.75	4.12	255.03	4.36	29.87	91.59	412.24	43.32	69.85	128.56	192.23	331.13	155.12	37.29	204.83	144.55	545.46	200.22	73.63	247.96	1.73
3	440518	Transcript	0	14.22	0.00	7.18	55.43	0.00	3.45	0.00	6.87	6.36	0.00	6.90	0.00	0.00	5.94	35.48	0.00	5.58	41.61	24.28	19.35	1.85	6.66	15.22	8.19	12.39	0.00	4.47	61.24	0.00
4	ER1a	ExonRegion	0	163.72	40.62	21.73	827.77	0.00	163.90	8.46	48.19	27.17	4.19	202.95	3.86	16.82	44.75	185.06	56.04	41.21	82.63	131.90	251.87	98.70	26.29	129.76	104.09	304.44	93.58	76.35	177.60	1.78
5	E1_Da	NovelBoundary	0	8.43	4.27	0.00	0.00	0.00	7.17	0.00	4.63	2.56	0.00	0.00	0.00	0.00	0.00	9.97	0.00	0.00	0.00	0.00	11.08	3.61	0.00	0.00	0.00	3.30	1.97	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	0	341.35	102.38	7.18	112.16	0.00	505.91	28.15	115.81	83.81	8.87	348.30	3.13	33.40	96.36	719.15	132.65	82.70	202.53	404.62	649.68	351.45	36.27	293.08	246.68	739.25	218.26	69.33	311.69	0.00
7	E2_Aa	NovelBoundary	0	2.24	0.00	0.00	9.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.17	0.00	0.00	1.13	0.00	16.18	3.31	1.68	1.94	0.00	3.05	1.52	16.35	0.00	1.80	0.00
8	ER2a	ExonRegion	0	339.11	57.11	33.31	489.07	0.00	245.39	19.59	112.99	63.22	5.74	358.57	5.73	35.94	106.33	446.06	63.26	87.91	157.76	225.86	378.05	142.11	45.69	273.32	132.84	599.96	223.31	124.43	329.27	2.19
9	E2_Da	NovelBoundary	0	15.81	4.85	0.00	9.06	0.00	3.68	0.00	0.00	5.76	0.00	1.30	0.00	0.00	1.77	19.53	0.00	2.39	9.25	8.09	11.41	3.69	0.00	2.51	5.56	0.00	5.41	0.00	10.15	0.00
10	E2a_E3a	KnownJunction	0	345.01	59.82	47.61	1934.76	0.00	183.55	29.24	131.08	77.04	1.52	215.75	6.11	39.14	138.46	515.44	0.00	100.37	145.38	202.31	323.60	118.04	27.08	181.49	143.08	563.47	208.69	53.72	211.45	3.70
11	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.40	0.00	1.61	0.00	0.00	0.00	0.00	20.96	0.00	0.00	16.18	44.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	Ix	Intron	0	5.34	1.14	0.27	6.03	0.00	5.73	1.01	0.45	4.96	0.00	3.68	0.20	0.30	1.16	12.11	5.69	1.47	2.70	9.30	8.02	7.13	0.23	0.91	2.09	3.95	1.96	1.66	4.38	0.25
13	Ix_SR1	SilentIntronRegion	0	5.34	1.14	0.27	6.03	0.00	5.74	1.01	0.45	4.96	0.00	3.68	0.20	0.30	1.16	12.12	5.69	1.47	2.71	9.30	8.03	7.13	0.23	0.91	2.09	3.95	1.96	1.66	4.38	0.25
14	Ix	Intron	0	2.37	1.27	0.10	0.85	0.00	2.23	0.18	0.27	2.77	0.19	2.27	0.27	0.32	0.63	7.07	2.48	2.27	1.53	4.72	2.69	4.19	0.11	0.75	1.33	3.23	1.49	2.08	3.80	0.09
15	Ix_SR1	SilentIntronRegion	0	2.29	1.28	0.11	0.92	0.00	2.20	0.19	0.29	2.91	0.21	2.41	0.30	0.33	0.59	6.82	2.68	2.31	1.50	5.04	2.89	4.14	0.06	0.72	1.41	3.17	1.46	1.90	3.99	0.08
16	Ix_AR1	ActiveIntronRegion	0	3.39	1.23	0.00	0.00	0.00	2.66	0.00	0.00	1.14	0.00	0.47	0.00	0.26	1.26	10.20	0.00	1.83	1.91	0.76	0.31	4.85	0.72	1.08	0.43	4.01	1.87	4.36	1.47	0.22
17	E3_Aa	NovelBoundary	0	7.61	0.00	0.00	0.00	0.00	3.07	0.00	2.54	0.00	0.00	1.39	0.00	1.59	0.00	0.00	0.00	1.73	0.00	0.00	0.00	3.61	0.00	0.00	0.00	0.00	4.16	0.00	5.84	1.65
18	E3_Ab	NovelBoundary	1	122.75	15.32	12.28	422.33	0.00	53.64	16.13	22.64	26.52	3.04	60.90	2.29	17.96	54.75	148.49	0.00	46.68	18.37	0.00	49.04	40.95	7.29	57.87	29.13	148.02	65.10	13.12	65.15	1.25
19	ER3a	ExonRegion	0	648.94	58.31	48.53	2561.26	0.00	343.32	28.22	244.86	111.23	3.61	392.44	6.18	53.58	156.01	583.86	2.53	96.92	163.07	183.30	366.09	201.12	86.53	344.02	229.63	1048.06	446.74	115.84	437.26	2.68
20	ER3b	ExonRegion	0	583.06	81.84	28.72	2212.26	0.00	310.37	17.87	203.30	88.05	4.26	463.60	7.90	49.89	156.09	627.08	0.09	103.23	264.64	231.12	357.81	202.26	94.60	402.32	229.59	988.42	435.74	139.10	467.57	2.48
21	E3_Da	NovelBoundary	0	18.82	0.00	0.00	10.14	0.00	5.14	0.00	2.24	0.00	0.00	0.00	0.00	0.00	4.59	25.11	0.00	2.79	0.00	8.09	6.29	0.00	0.00	0.00	0.00	7.31	0.00	0.00	10.20	0.00
22	E3a_E4a	KnownJunction	0	287.20	55.46	23.84	1061.85	0.00	165.10	7.61	81.52	14.83	3.91	350.19	10.36	25.92	103.38	410.00	0.00	90.08	180.32	64.74	305.33	136.38	48.37	243.64	152.05	434.13	205.69	102.08	249.95	3.24
23	Ix	Intron	0	8.51	1.51	0.26	2.74	0.25	3.53	0.26	0.84	1.42	0.55	3.00	0.28	0.28	1.60	13.14	0.22	2.09	3.73	5.44	2.29	8.02	0.28	1.61	1.81	3.02	2.32	0.56	5.47	0.25
24	Ix_AR1	ActiveIntronRegion	0	4.12	1.14	0.00	0.00	0.00	2.02	0.00	0.85	0.55	0.00	0.55	0.00	1.27	2.22	24.34	0.00	2.18	4.75	3.13	1.27	6.99	0.00	1.77	0.00	6.31	6.17	1.66	4.00	0.00
25	Ix_SR1	SilentIntronRegion	0	8.75	1.53	0.27	2.89	0.26	3.62	0.27	0.84	1.47	0.58	3.13	0.30	0.23	1.56	12.53	0.23	2.08	3.68	5.57	2.35	8.08	0.29	1.60	1.91	2.84	2.11	0.50	5.56	0.27
26	E4_Aa	NovelBoundary	1	13.57	0.00	2.22	0.00	0.00	3.76	0.00	0.00	10.96	0.00	1.46	1.36	1.56	2.04	9.97	0.00	6.51	0.00	8.09	7.53	22.22	0.00	2.41	0.00	0.00	1.72	0.00	13.57	4.52
27	ER4a	ExonRegion	1	162.31	25.32	20.35	476.33	0.00	70.99	3.68	32.47	8.79	3.53	149.65	3.75	11.22	50.73	156.53	6.33	47.25	56.18	37.22	131.62	58.24	22.07	101.61	73.14	179.23	110.01	54.69	158.23	0.42
28	E4_Da	KnownBoundary	1	103.76	17.26	0.00	31.71	7.37	17.69	0.00	11.69	4.54	12.10	7.81	1.54	0.00	5.65	53.62	18.05	5.72	37.63	0.00	43.67	30.40	2.04	0.00	28.53	13.75	4.33	4.77	19.37	0.00
29	E4a_E4b	KnownJunction	0	14.22	0.00	7.18	55.43	0.00	3.45	0.00	6.87	6.36	0.00	6.90	0.00	0.00	5.94	35.48	0.00	5.58	41.61	24.28	19.35	1.85	6.66	15.22	8.19	12.39	0.00	4.47	61.24	0.00
30	ER4b	ExonRegion	0	64.44	8.82	0.47	25.39	0.00	15.69	0.95	7.71	2.01	0.80	12.21	1.12	0.35	7.63	23.85	5.44	9.99	19.96	5.36	17.46	19.30	1.87	7.30	10.95	17.56	10.74	2.10	20.48	0.00
31	E4_Ab	KnownBoundary	0	95.73	12.51	2.39	40.12	0.00	10.78	0.00	13.93	3.23	1.68	19.55	0.00	1.62	18.94	30.70	6.43	30.75	47.78	24.28	54.17	36.06	4.72	16.15	13.76	32.01	22.01	0.00	26.64	0.00
32	ER4c	ExonRegion	0	100.06	14.93	7.58	106.86	0.00	23.80	8.31	20.78	14.35	0.05	34.24	1.71	2.12	20.82	65.00	7.86	24.35	47.77	28.83	46.27	35.77	5.03	24.51	22.24	33.81	18.42	6.22	87.71	0.69