Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP11-390P2.1	Gene	0	4.21	1.21	2.30	7.48	4.29	6.94	2.36	4.31	1.78	2.89	2.04	3.22	3.38	22.96	11.11	2.51	3.49	5.78	0.40	6.92	2.02	6.03	6.50	21.36	4.66	58.34	0.77	3.41	3.84
2	432673	Transcript	0	1.78	0.04	0.13	2.68	0.02	2.00	0.34	0.25	0.40	1.22	0.60	0.28	1.51	8.78	2.12	0.85	0.49	2.70	0.00	0.03	0.49	2.04	3.67	4.87	0.40	25.11	0.19	2.87	2.18
3	428044	Transcript	0	0.07	0.55	0.93	1.73	0.00	1.48	1.43	0.00	0.67	0.28	0.76	0.93	0.00	3.86	0.31	0.00	1.06	3.20	0.00	0.00	0.96	0.08	0.46	4.15	0.00	5.06	0.00	0.33	0.51
4	458733	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	447494	Transcript	0	3.06	0.00	0.37	0.00	1.08	3.96	0.45	0.02	2.12	1.00	0.04	0.97	0.51	8.65	8.30	0.56	2.19	2.75	0.00	0.02	2.22	0.02	0.88	11.71	1.37	3.72	0.02	0.74	1.20
6	ER1a	ExonRegion	0	0.83	0.00	0.00	0.00	0.00	1.14	0.00	0.00	0.82	3.16	0.27	0.00	1.69	5.11	0.00	1.81	0.00	3.24	0.00	0.00	0.00	0.00	3.38	1.78	1.04	13.94	0.00	3.54	0.98
7	E1_Da	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	1.96	0.00	0.00	0.00	3.91	0.00	1.17	0.00	12.19	0.00	0.00	1.40	0.00	0.00	0.00	2.05	2.04	4.58	0.00	1.93	56.39	0.00	4.04	3.17
8	E1a_E2c	KnownJunction	0	3.01	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	1.49	0.00	1.34	4.23	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	2.51	4.67	0.00	23.47	0.00	4.58	0.00
9	E1a_E3b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.98	0.00	0.00	0.00	6.10	0.00	0.00	0.00	0.00	0.00
10	Ix	Intron	0	1.10	0.24	0.31	1.31	1.43	1.25	0.22	0.40	0.27	0.26	0.13	0.65	0.14	6.13	1.68	0.36	1.85	3.12	0.58	0.30	0.47	0.07	0.73	5.58	0.78	8.72	0.00	0.18	0.29
11	Ix_SR1	SilentIntronRegion	0	1.04	0.00	0.00	1.16	0.00	1.11	0.00	0.00	0.00	0.23	0.00	0.00	0.21	0.80	0.00	0.00	0.00	0.31	0.00	0.00	0.00	0.00	1.17	0.35	0.00	6.07	0.00	0.26	0.22
12	Ix_SR2	SilentIntronRegion	0	1.59	0.48	0.62	2.13	2.90	1.84	0.45	0.82	0.54	0.43	0.27	1.14	0.19	11.19	3.08	0.74	3.57	5.14	1.19	0.61	0.85	0.00	0.94	10.67	1.59	13.50	0.00	0.24	0.50
13	E2_Aa	NovelBoundary	0	2.77	0.00	0.00	0.00	0.00	1.73	0.00	0.00	0.00	2.04	0.00	1.20	0.00	6.71	0.00	0.00	3.11	0.00	0.00	0.00	0.00	0.00	0.00	22.43	1.93	6.01	0.00	2.29	3.96
14	ER2a	ExonRegion	0	0.15	1.09	1.85	3.45	0.00	2.96	0.00	0.00	0.00	0.56	0.00	0.00	0.00	7.72	0.62	0.00	2.13	6.41	0.00	0.00	0.00	0.15	0.93	8.31	0.00	10.13	0.00	0.66	1.03
15	E2_Ab	KnownBoundary	0	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.44	0.00	0.00	1.73	0.00	0.00	0.00	0.00	0.00	2.27	8.08	0.00	5.15	0.00	0.00	1.75
16	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	21.57	0.00	3.49	0.00	0.00	0.00	5.35	0.00	0.00	0.00	11.23	8.17	0.00	1.08	0.00	0.00	0.00	0.00	1.90	0.00	2.75	0.00	0.00	0.00	0.00	0.00
17	ER2b	ExonRegion	0	5.00	3.28	2.24	14.63	0.00	5.50	0.00	0.00	0.00	2.89	1.59	0.00	0.43	15.72	5.60	0.00	3.01	7.28	0.00	0.00	0.00	1.80	2.41	20.08	0.00	11.53	0.00	3.80	1.34
18	ER2c	ExonRegion	0	7.93	1.56	0.87	9.97	3.23	7.91	5.34	3.65	0.74	2.89	6.99	4.07	4.03	30.79	14.66	2.51	4.52	14.80	2.12	13.93	2.06	3.52	10.33	21.12	6.56	77.80	1.09	5.59	4.30
19	E2_Da	NovelBoundary	0	0.00	0.00	4.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.05	0.00	3.44	2.45	0.00	0.00	0.00	0.00	2.29	0.00	5.32	0.00	3.60	0.00	2.20	7.13
20	E2a_E3b	KnownJunction	0	0.00	0.00	1.97	0.00	0.00	4.95	0.00	4.23	0.00	3.91	6.39	2.68	5.64	33.94	32.69	3.67	3.87	4.62	0.00	3.56	1.97	4.33	19.50	7.90	0.00	59.91	0.00	6.29	6.11
21	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	9.49	0.00	5.52	0.00	0.00	1.49	0.00	0.00	1.57	0.00	8.40	7.97	0.00	1.40	9.25	0.00	0.00	0.00	0.00	1.82	5.44	1.48	1.97	0.00	0.00	0.00
22	ER3a	ExonRegion	0	3.06	0.00	0.37	0.00	1.08	3.96	0.45	0.02	2.12	1.00	0.04	0.97	0.51	8.65	8.30	0.56	2.19	2.75	0.00	0.02	2.22	0.02	0.88	11.71	1.37	3.72	0.02	0.74	1.20
23	E3_Ab	KnownBoundary	0	2.89	0.00	0.00	0.00	0.00	6.37	0.00	0.00	2.80	0.00	0.00	0.00	1.27	10.59	16.74	0.00	3.08	5.39	0.00	0.00	0.00	0.00	0.00	10.35	1.59	3.35	0.00	0.00	4.62
24	ER3b	ExonRegion	0	7.45	0.00	3.95	22.22	17.59	7.91	6.47	4.92	1.96	6.35	2.98	6.28	7.34	41.70	21.80	1.75	5.27	10.45	1.03	12.67	3.07	15.13	11.54	39.62	10.83	94.08	1.32	7.74	6.76
25	E3_Da	KnownBoundary	0	0.00	0.00	3.04	10.78	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	11.30	7.77	7.04	2.79	0.00	0.00	0.00	0.00	2.24	0.00	5.92	1.63	41.11	0.00	1.89	1.68
26	E3a_E3c	KnownJunction	0	14.10	0.00	3.99	9.49	14.74	13.89	7.32	6.77	0.00	1.88	0.00	5.63	12.20	30.13	0.00	2.91	4.14	0.00	0.00	7.61	0.00	0.00	13.35	30.92	3.45	68.36	2.39	1.80	6.34
27	E3a_E3d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.86	0.00	1.34	0.00	1.52	1.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER3c	ExonRegion	0	1.51	0.11	0.38	8.05	0.07	3.24	1.01	0.76	0.37	0.52	0.03	0.84	1.50	16.99	6.36	0.74	1.47	0.24	0.00	0.08	1.48	6.13	5.12	8.17	0.14	37.92	0.58	0.50	5.55
29	E3_Ac	KnownBoundary	0	0.00	0.00	0.00	10.78	0.00	1.88	0.00	0.00	0.00	0.00	0.00	1.87	1.97	19.63	8.17	0.00	3.44	4.62	0.00	0.00	0.00	0.00	6.65	5.62	0.00	10.34	0.00	1.75	0.00
30	ER3d	ExonRegion	0	9.13	6.43	4.51	8.35	4.17	16.27	1.86	10.85	1.11	5.38	3.25	6.04	9.87	47.08	25.87	8.66	8.14	3.89	0.00	13.56	2.57	8.33	12.93	49.92	8.23	119.92	3.62	3.33	5.54
31	E3_Ad	KnownBoundary	0	5.60	4.56	0.97	0.00	13.26	18.07	0.00	16.02	3.78	7.11	0.00	7.68	5.22	40.50	0.00	6.04	4.66	0.00	0.00	15.46	3.81	4.57	10.83	54.55	3.86	97.93	6.11	2.20	7.10
32	ER3e	ExonRegion	0	11.59	3.18	2.59	0.00	2.02	22.51	2.46	13.75	3.16	8.08	1.08	8.85	6.86	46.49	8.75	1.58	6.86	6.14	0.00	15.81	3.74	7.04	14.07	49.95	6.52	132.85	2.06	9.32	10.61
33	E3_Db	KnownBoundary	0	11.56	7.56	3.01	7.98	0.00	16.92	5.09	6.72	0.00	7.59	9.68	6.51	4.87	38.53	16.74	0.00	6.19	14.38	0.00	11.25	5.94	9.87	20.64	47.01	9.24	174.53	2.24	13.21	10.43
34	ER3f	ExonRegion	0	1.99	1.69	4.88	7.00	4.77	8.00	2.06	9.06	3.59	2.88	2.19	4.31	2.92	20.70	8.75	4.53	3.37	4.58	0.00	9.66	2.22	9.59	6.15	21.74	6.07	79.82	0.26	3.52	3.28