Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CITED2	Gene	0	82.17	90.44	57.97	67.18	50.73	94.69	43.44	126.87	31.10	60.46	72.86	53.30	61.84	127.85	54.67	54.04	63.62	71.54	56.02	46.66	61.78	120.80	107.81	259.03	137.03	83.94	97.24	121.36	35.77
2	367651	Transcript	0	107.26	131.74	65.72	72.81	39.37	146.15	73.67	147.34	42.82	109.12	110.73	82.45	95.89	189.18	82.95	118.79	89.66	132.04	95.64	67.92	83.58	138.62	143.33	340.31	215.75	140.65	71.06	180.66	56.11
3	392312	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.23	2.05	0.00	0.00	0.00	0.00
4	IG50_AR5	ActiveIntergenicRegion	0	0.47	0.85	0.00	4.74	0.00	0.91	0.18	0.16	0.91	0.00	0.84	0.05	0.11	0.22	3.61	0.66	0.26	0.17	5.53	1.23	1.38	0.32	1.19	0.95	2.52	0.35	2.66	1.87	0.00
5	IG50_AR4	ActiveIntergenicRegion	0	0.00	0.96	0.00	0.00	0.00	0.00	0.66	0.00	2.40	0.00	0.69	0.00	0.00	0.37	0.00	0.82	0.00	0.00	1.58	0.00	1.58	0.00	0.30	0.35	0.24	0.26	0.06	0.28	0.00
6	IG50_AR2	ActiveIntergenicRegion	0	5.70	2.25	0.15	22.94	0.00	5.97	1.33	0.73	2.88	0.02	20.88	0.00	0.44	5.91	22.40	4.85	3.87	1.91	57.16	22.56	4.77	1.70	26.11	6.13	17.07	5.06	0.00	12.53	0.00
7	IG50_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	4.06	0.00	0.46	0.00	0.00	0.00	0.00	0.00	0.23	0.00	0.00	0.00	1.59	0.00	0.00	0.00	0.00	0.00	0.00	1.34	0.00	3.02	0.29	0.00	1.33	0.00
8	ER1a	ExonRegion	1	104.95	89.81	57.76	70.84	64.02	95.43	28.39	132.24	25.72	58.01	62.53	56.83	64.78	159.40	48.25	59.08	63.79	86.43	47.54	72.35	56.41	133.34	80.17	295.73	140.28	115.30	95.21	168.54	44.41
9	E1_Da	NovelBoundary	0	2.54	0.00	1.54	0.00	0.00	3.76	2.46	0.00	1.55	1.96	6.45	1.54	1.62	7.82	25.91	3.21	2.50	0.00	0.00	0.00	0.00	0.00	4.73	16.33	5.00	0.00	0.00	0.00	0.00
10	E1a_E2a	KnownJunction	0	174.01	242.57	96.07	99.43	32.27	266.35	144.01	240.67	82.80	211.95	212.11	145.42	183.26	339.99	156.86	254.43	174.63	226.81	194.22	116.36	137.26	234.48	250.83	629.92	429.58	235.64	88.31	289.09	103.96
11	I1	Intron	0	10.22	3.01	6.86	6.36	11.37	5.64	3.13	3.06	1.12	3.84	1.45	1.30	1.01	10.24	10.59	5.07	2.48	0.85	3.19	7.25	4.74	3.20	1.20	23.37	4.75	3.14	1.83	6.33	1.56
12	I1_SR1	SilentIntronRegion	0	2.72	1.09	3.25	4.11	2.18	4.44	2.02	4.18	0.61	0.78	0.00	2.22	1.22	4.14	0.00	0.37	1.77	0.63	3.02	1.99	3.92	3.08	0.00	9.14	0.77	5.93	2.52	3.12	1.68
13	I1_AR1	ActiveIntronRegion	0	5.23	6.04	12.17	1.68	19.58	4.47	1.07	5.50	0.28	5.63	0.21	1.52	2.08	15.04	12.15	4.13	2.87	0.68	4.48	3.71	2.88	2.36	1.23	23.38	5.16	3.63	2.53	14.51	1.03
14	I1_SR2	SilentIntronRegion	0	13.73	2.44	6.40	8.59	11.23	6.78	4.40	2.50	1.70	4.44	2.46	1.29	0.75	10.68	11.35	5.98	2.67	1.11	2.70	10.62	6.04	3.98	1.64	27.46	5.99	2.38	1.24	4.91	1.92
15	I1_AR2	ActiveIntronRegion	0	9.21	1.89	2.12	6.38	4.56	3.19	1.67	0.00	0.22	0.00	0.00	0.00	0.00	4.21	14.30	7.05	1.45	0.06	3.47	1.55	2.52	0.84	0.00	15.97	1.22	3.61	3.00	0.35	0.57
16	E2_Aa	NovelBoundary	0	5.84	0.00	1.42	0.00	7.37	0.00	0.00	4.43	1.80	3.52	3.23	1.54	4.97	5.49	18.14	7.57	0.00	0.00	0.00	0.00	0.00	1.90	0.00	11.42	0.00	2.19	1.89	3.91	0.00
17	E2_Ab	NovelBoundary	0	70.43	70.29	72.60	50.69	53.05	97.15	97.55	105.55	27.92	89.00	90.10	91.47	75.25	153.46	40.66	119.72	93.71	36.99	32.15	16.29	46.93	69.96	124.55	225.15	111.46	131.96	37.32	161.84	62.79
18	ER2a	ExonRegion	0	180.29	232.86	105.97	91.00	54.80	260.88	150.96	236.27	76.90	217.53	211.18	161.07	182.58	349.31	150.59	229.45	169.74	264.43	173.99	107.74	144.86	229.35	273.25	561.93	392.59	278.35	84.05	333.98	108.42
19	ER2b	ExonRegion	0	167.82	152.18	116.64	98.74	91.45	178.60	99.60	248.74	54.72	114.75	115.71	111.53	123.71	263.35	118.87	112.21	150.92	148.29	90.94	88.52	108.04	267.41	230.32	456.17	219.86	173.70	120.28	249.73	71.06
20	E2_Da	KnownBoundary	0	82.52	68.45	71.61	60.61	44.80	111.80	61.05	176.22	38.49	66.59	23.31	47.05	43.72	116.65	96.27	48.42	53.62	69.61	56.65	27.62	127.27	93.05	102.00	219.04	109.79	93.17	23.21	135.69	33.21
21	E2a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.23	2.05	0.00	0.00	0.00	0.00
22	ER2c	ExonRegion	0	62.71	62.32	49.34	69.06	27.09	81.66	33.55	98.38	18.34	38.27	33.71	34.45	29.95	73.61	46.56	37.30	25.11	67.07	39.31	33.06	59.90	74.94	79.24	136.92	62.39	55.20	32.34	82.61	13.32
23	E2_Ac	KnownBoundary	0	151.71	165.79	102.43	182.91	132.19	198.32	79.47	227.68	62.03	76.54	128.28	78.61	81.49	181.95	198.92	57.91	68.47	156.30	121.39	90.22	123.18	150.42	137.75	381.44	201.66	101.36	117.48	157.17	30.41
24	ER2d	ExonRegion	0	179.75	245.46	99.53	144.27	109.74	216.32	74.71	307.46	89.27	135.45	197.61	100.16	132.66	291.72	104.30	101.39	103.61	123.04	149.19	97.48	155.13	251.72	205.09	708.56	391.58	150.19	316.42	209.16	76.03
25	E2_Db	KnownBoundary	0	150.65	174.51	23.64	26.53	26.67	163.71	40.34	243.85	81.06	76.02	72.92	59.88	78.62	156.20	93.28	51.18	58.52	91.96	89.02	70.46	100.80	135.45	102.98	513.28	285.28	67.76	35.93	91.17	63.65
26	ER2e	ExonRegion	0	14.34	31.14	19.45	33.71	18.65	26.41	11.42	29.13	10.34	19.83	34.11	14.47	18.90	23.58	12.48	13.67	15.03	15.46	23.11	10.09	19.47	20.99	33.16	77.08	53.91	18.73	55.39	29.09	10.44
27	IG49	Intergenic	0	3.43	2.75	0.74	12.56	0.23	9.39	0.74	2.02	3.89	0.32	15.87	0.31	0.74	1.86	19.73	6.10	5.33	2.52	7.70	16.19	15.85	1.01	3.89	3.62	20.51	5.35	6.19	6.36	0.16
28	IG49_AR3	ActiveIntergenicRegion	0	1.89	10.10	1.73	23.73	0.00	15.69	2.19	4.66	12.99	3.04	42.30	0.84	3.26	2.56	65.72	13.49	8.86	2.35	11.75	33.79	40.09	3.09	5.29	19.09	43.11	21.63	8.20	18.52	0.00
29	IG49_SR3	SilentIntergenicRegion	0	5.26	30.61	0.36	7.65	0.00	34.24	0.00	1.42	23.75	2.69	40.63	2.47	4.25	3.34	83.75	13.00	9.65	6.70	24.27	25.30	39.42	3.20	1.81	28.94	38.27	8.79	22.31	6.22	1.28
30	IG49_AR2	ActiveIntergenicRegion	0	0.83	2.47	0.39	25.03	0.00	23.81	1.98	1.44	10.43	1.89	31.98	0.67	3.11	2.30	63.52	12.01	7.26	2.64	18.39	26.88	38.42	4.24	1.26	11.46	35.71	12.14	12.35	7.21	0.92
31	IG49_SR2	SilentIntergenicRegion	0	0.30	3.17	0.59	19.27	0.66	33.11	0.31	2.75	5.40	0.49	56.49	0.71	3.97	1.55	71.21	14.51	15.98	6.96	16.38	39.72	58.47	2.45	0.85	11.40	57.79	9.92	19.89	12.16	0.27
32	IG49_AR1	ActiveIntergenicRegion	0	1.07	6.86	0.07	20.84	0.49	29.04	1.02	1.71	5.59	0.29	32.08	1.23	3.26	1.44	43.91	14.36	12.57	4.98	25.31	35.71	53.61	1.78	1.37	7.85	37.64	5.59	14.27	4.79	0.40
33	IG49_SR1	SilentIntergenicRegion	0	3.71	2.45	0.78	11.59	0.21	7.32	0.70	2.00	3.49	0.25	13.20	0.24	0.44	1.87	15.43	5.25	4.59	2.27	6.33	14.17	12.05	0.82	4.15	2.81	17.98	4.88	5.20	6.12	0.13