Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LTV1	Gene	0	90.20	250.68	154.82	419.08	253.13	231.09	232.77	159.07	269.98	183.47	324.52	354.96	151.93	95.24	147.87	152.18	92.21	83.06	415.66	97.44	403.04	108.17	154.29	172.92	168.57	62.01	188.23	170.81	181.18
2	367576	Transcript	0	94.30	271.64	144.35	464.63	279.92	227.92	233.93	156.96	281.75	196.83	344.43	381.65	154.07	100.56	148.01	150.94	98.49	86.40	463.43	106.69	400.41	108.01	161.60	172.69	174.80	58.38	198.68	179.68	199.97
3	IG27_AR1	ActiveIntergenicRegion	0	0.00	2.35	0.00	5.22	0.00	0.00	2.94	1.34	0.00	0.00	0.87	0.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	2.38	4.89
4	ER1a	ExonRegion	1	51.82	61.91	187.79	443.40	289.62	133.68	120.36	95.83	113.87	95.74	86.96	170.09	63.95	32.87	23.34	102.00	63.49	46.22	81.50	30.47	255.21	83.54	97.57	20.43	57.63	132.45	75.59	194.36	175.71
5	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	1.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	0	9.97	44.02	38.54	57.81	33.16	12.51	17.05	52.15	23.94	10.51	14.11	46.20	23.60	14.71	16.54	7.34	9.68	28.51	32.37	32.91	36.30	31.31	6.11	15.13	7.50	3.30	5.07	17.30	46.42
7	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	108.33	126.44	49.29	60.55	46.68	198.22	197.39	213.29	175.91	162.56	185.25	267.84	106.01	70.56	75.44	177.50	75.61	81.65	236.82	75.06	375.12	152.43	145.17	86.40	131.92	174.61	80.82	243.94	247.12
9	E2_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E2a_E3a	KnownJunction	1	59.04	151.15	71.71	75.49	59.10	67.76	124.50	135.81	89.80	127.07	258.49	348.67	98.27	81.16	16.34	67.01	84.63	66.91	218.27	60.95	152.94	65.24	240.73	64.84	122.56	100.16	221.80	297.27	269.62
11	I2	Intron	0	0.32	0.44	0.42	0.00	0.00	0.34	0.61	0.28	0.81	0.00	0.48	0.65	0.00	0.05	0.00	0.37	0.37	0.67	2.08	0.00	3.28	0.00	0.18	0.65	0.00	0.16	0.00	0.41	0.34
12	I2_AR1	ActiveIntronRegion	0	0.32	0.44	0.42	0.00	0.00	0.34	0.61	0.28	0.82	0.00	0.48	0.65	0.00	0.05	0.00	0.37	0.37	0.68	2.08	0.00	3.29	0.00	0.18	0.65	0.00	0.16	0.00	0.41	0.34
13	E3_Aa	NovelBoundary	0	0.00	4.56	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.00	0.00	8.09	0.00	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	1	106.69	141.31	300.10	470.15	350.97	123.05	118.06	209.48	101.65	123.69	241.89	293.01	105.62	103.92	64.79	111.67	67.06	78.08	287.75	100.63	204.91	107.83	160.05	133.62	149.83	53.51	129.73	187.02	140.16
15	E3_Da	NovelBoundary	0	0.00	4.85	1.54	10.78	0.00	1.96	0.00	0.00	5.27	2.00	1.55	0.00	0.00	0.93	0.00	0.00	2.63	0.00	8.09	0.00	4.09	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00
16	E3a_E4a	KnownJunction	0	141.09	230.55	189.78	696.25	588.16	185.97	150.02	197.82	198.49	183.31	356.49	378.16	130.53	128.00	144.31	140.07	74.03	90.16	550.29	148.78	358.27	157.13	152.72	163.42	182.11	62.05	129.96	184.26	162.82
17	I3	Intron	0	1.55	2.30	0.78	1.61	0.17	1.99	0.49	0.25	2.47	1.35	1.29	2.63	0.16	1.14	1.08	5.57	2.06	2.99	7.28	0.67	4.70	0.06	0.31	0.52	0.79	0.16	0.76	1.74	0.74
18	I3_AR1	ActiveIntronRegion	0	1.03	2.16	1.20	1.72	0.00	3.56	0.81	0.15	2.63	1.09	1.14	2.28	0.00	1.36	0.88	6.50	1.32	2.17	9.04	0.66	6.07	0.29	0.43	1.20	1.29	0.13	0.15	0.45	0.55
19	I3_SR1	SilentIntronRegion	0	1.70	2.35	0.66	1.58	0.22	1.56	0.40	0.28	2.43	1.42	1.34	2.73	0.20	1.08	1.13	5.32	2.27	3.22	6.80	0.67	4.33	0.00	0.28	0.33	0.65	0.17	0.93	2.10	0.79
20	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	1.22	0.00	0.00	4.31	3.38	1.13	8.97	3.82	2.77	0.00	0.00	0.00	9.71	0.00	2.12	0.00	1.44	0.00	10.14	4.04	0.00
21	ER4a	ExonRegion	0	114.87	250.06	203.30	545.37	325.22	180.99	186.57	231.81	175.89	202.10	365.80	390.07	148.15	135.37	85.60	179.25	96.27	103.00	463.28	148.58	377.49	139.32	206.24	191.04	220.88	76.96	233.06	212.18	163.26
22	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.86	0.00	0.00	0.00	0.00	0.00	0.00	4.09	0.00	0.00	0.00	0.00	0.00	2.48	0.00	1.88
23	E4a_E5a	KnownJunction	0	124.58	336.51	248.88	648.59	204.40	196.94	190.01	205.28	196.88	253.57	394.86	452.34	178.81	125.65	42.06	208.69	122.92	146.03	396.31	163.58	389.63	121.59	240.73	179.45	189.88	77.50	145.02	210.37	182.70
24	E5_Aa	NovelBoundary	0	3.01	3.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	5.66	2.66	9.25	0.00	0.00	5.13	2.48	1.82	0.00	0.00	0.00	0.00	0.00	0.00
25	ER5a	ExonRegion	0	118.90	251.43	233.27	418.52	178.53	214.45	197.94	177.04	204.22	215.54	410.74	448.60	169.83	127.08	91.46	175.23	106.63	90.85	440.15	117.28	403.98	130.88	225.73	200.78	221.00	65.60	188.18	225.19	187.62
26	E5_Da	NovelBoundary	0	29.96	9.70	11.26	0.00	13.26	3.03	26.78	0.00	27.80	21.13	15.22	41.87	2.99	8.82	16.74	18.05	18.53	28.38	40.46	30.02	47.17	3.74	1.87	16.69	5.53	5.49	0.00	17.70	6.34
27	E5a_E6a	KnownJunction	0	111.78	344.27	236.12	496.95	283.98	216.70	194.24	124.32	208.54	206.28	457.53	452.16	158.81	100.61	105.24	171.51	111.35	71.54	550.06	172.01	420.92	165.06	250.09	182.74	191.17	65.92	232.24	224.03	262.59
28	I5	Intron	0	3.46	7.02	1.16	19.85	2.25	7.61	5.12	6.37	10.36	6.00	9.06	11.68	0.75	3.66	4.46	10.72	4.13	13.93	13.27	6.18	12.18	2.08	0.83	2.48	3.96	0.00	1.69	9.40	1.08
29	I5_AR1	ActiveIntronRegion	0	3.49	7.06	1.17	19.97	2.27	7.68	5.16	6.42	10.46	6.05	9.15	11.79	0.75	3.69	4.50	10.82	4.17	14.06	13.39	6.24	12.28	2.10	0.84	2.50	3.99	0.00	1.71	9.48	1.09
30	E6_Aa	NovelBoundary	0	8.73	25.79	6.63	19.84	7.37	8.63	8.53	4.88	9.01	11.94	9.40	15.24	1.34	6.60	0.00	13.54	4.50	18.49	16.18	15.55	32.13	4.18	0.00	6.04	3.86	0.00	8.95	5.93	10.07
31	ER6a	ExonRegion	0	129.91	292.32	267.64	563.13	313.10	231.32	230.89	235.03	267.69	229.79	442.10	491.20	185.03	119.50	142.88	159.04	116.82	106.41	457.96	132.68	396.22	183.68	215.22	194.70	252.00	59.94	249.04	212.53	208.37
32	E6_Da	NovelBoundary	0	18.88	3.59	3.64	29.77	6.78	5.22	0.00	17.52	6.09	3.32	7.75	11.93	0.00	11.19	8.57	14.69	10.71	14.64	48.55	38.95	25.15	6.71	16.60	16.87	8.30	0.00	0.00	12.00	3.07
33	E6a_E7a	KnownJunction	0	101.93	282.71	131.53	638.23	478.07	286.80	236.53	176.82	287.50	229.81	426.43	488.27	138.52	123.04	175.20	133.49	112.32	86.43	526.01	106.19	470.62	112.50	181.39	168.08	204.43	31.28	221.80	198.78	190.98
34	E6a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.09
35	I6	Intron	0	5.08	6.64	2.42	10.59	3.00	11.92	6.08	4.13	6.84	7.73	3.59	5.14	1.95	5.70	12.63	16.61	10.65	8.36	20.73	18.57	24.22	2.50	2.50	11.71	5.63	2.18	3.44	12.64	8.61
36	I6_AR1	ActiveIntronRegion	0	8.20	6.72	4.67	10.90	3.67	11.87	3.91	4.96	5.67	9.18	4.51	4.41	1.59	7.70	3.55	14.53	8.72	8.71	13.74	26.22	28.42	2.79	3.90	6.62	7.34	3.38	1.73	11.80	7.34
37	I6_SR1	SilentIntronRegion	0	4.41	3.77	1.45	7.28	1.57	9.04	5.56	4.04	4.44	6.46	2.83	3.87	1.91	4.65	10.60	16.98	7.43	8.09	14.64	16.28	21.11	3.21	1.80	12.06	6.79	2.07	1.14	10.88	7.55
38	I6_AR2	ActiveIntronRegion	0	5.78	8.59	1.82	13.45	4.64	16.95	9.79	4.72	9.84	9.98	4.85	7.51	2.77	6.86	21.14	21.87	16.79	10.89	31.00	22.37	34.17	2.92	3.13	15.58	6.03	2.63	7.59	19.80	12.59
39	I6_AR3	ActiveIntronRegion	0	0.00	0.00	1.00	0.00	0.00	0.92	2.69	2.45	0.00	3.69	1.45	0.00	0.00	1.41	3.73	1.12	1.22	0.61	16.59	2.50	3.96	0.00	0.00	2.15	0.00	0.00	0.00	3.26	0.00
40	I6_SR2	SilentIntronRegion	0	2.16	2.83	3.00	26.79	3.26	12.03	3.11	3.21	3.15	4.16	2.40	3.56	1.18	3.80	7.76	12.53	5.59	4.62	23.39	8.82	8.80	1.82	0.00	18.64	2.09	0.00	2.56	8.20	7.47
41	I6_AR5	ActiveIntronRegion	0	1.02	9.75	1.77	2.73	0.79	6.12	3.33	2.00	8.53	4.23	1.13	4.19	1.14	2.73	14.29	9.46	8.39	4.32	18.65	6.34	7.41	0.00	1.29	7.61	1.40	0.37	1.42	2.73	4.28
42	E7_Aa	NovelBoundary	0	0.00	27.15	0.00	16.39	7.22	9.86	0.00	0.00	6.85	0.00	0.00	5.33	0.00	1.13	9.97	18.67	8.58	4.62	16.18	0.00	1.80	0.00	0.00	4.85	0.00	0.00	0.00	1.93	4.82
43	ER7a	ExonRegion	0	105.90	336.45	150.50	607.75	331.90	323.86	316.41	195.18	391.41	263.29	476.44	469.01	198.90	118.07	204.60	167.17	120.33	105.84	532.10	115.98	503.42	136.88	181.73	227.85	236.73	47.97	321.09	190.55	233.90
44	E7_Da	NovelBoundary	0	2.95	4.46	0.00	0.00	13.26	15.92	2.46	4.73	2.31	0.00	2.97	4.64	0.00	2.75	8.57	10.71	9.16	4.62	32.37	0.00	9.15	0.00	2.51	4.49	0.00	3.69	0.00	4.09	4.89
45	E7a_E8a	KnownJunction	0	95.73	376.65	110.87	636.72	411.17	357.85	307.93	98.88	387.96	272.47	528.93	440.29	213.33	108.41	247.16	153.30	101.31	109.29	727.87	141.42	621.87	103.41	133.76	248.23	242.16	34.63	298.63	151.60	255.13
46	I7	Intron	0	3.03	9.94	3.15	3.75	5.88	7.05	5.70	4.34	8.83	4.54	4.24	6.33	1.76	3.58	11.50	12.96	8.52	3.24	13.05	4.06	10.31	1.98	1.14	11.04	4.49	1.32	0.19	3.50	2.24
47	I7_SR1	SilentIntronRegion	0	0.47	5.58	0.74	0.00	3.22	1.56	1.79	0.52	6.62	1.29	0.52	1.17	0.91	0.96	4.06	3.23	0.69	3.89	11.39	0.61	5.71	1.62	0.00	4.27	2.29	1.73	0.00	1.43	0.06
48	I7_AR2	ActiveIntronRegion	0	4.43	12.87	4.52	5.70	7.37	9.70	7.84	6.39	11.01	6.30	6.15	9.08	2.34	5.01	15.98	17.70	12.68	3.06	15.17	5.73	13.46	2.42	1.72	15.03	5.98	1.37	0.29	4.53	3.37
49	E8_Aa	NovelBoundary	1	0.00	35.87	2.52	20.92	22.11	24.02	40.85	8.96	31.40	9.51	19.17	9.82	8.28	9.66	48.83	19.51	16.52	4.62	24.28	7.69	28.08	0.00	2.46	14.06	3.86	2.19	0.00	2.29	9.31
50	ER8a	ExonRegion	0	79.06	349.58	170.35	625.23	325.08	315.28	317.22	141.34	384.49	217.10	406.52	405.77	159.10	102.74	150.38	172.43	114.10	87.82	503.92	89.76	513.14	91.46	144.00	205.13	185.93	43.64	247.51	163.97	190.62
51	E8_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.48	0.00	6.45	3.37	0.00	1.02	0.00	3.60	0.00	0.00	0.00	0.00	8.70	0.00	0.00	2.63	0.00	0.00	0.00	1.98	1.62
52	E8a_E9a	KnownJunction	0	71.73	300.35	105.24	676.41	329.82	311.12	407.66	127.30	547.26	199.65	316.95	418.67	183.04	86.28	182.18	145.96	140.73	65.88	533.88	100.64	505.91	66.36	101.26	149.12	154.19	39.61	356.63	144.72	265.82
53	E8a_E10a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
54	I8	Intron	0	0.72	2.15	0.28	3.60	0.00	1.61	1.69	0.31	3.66	1.93	0.00	2.06	0.00	0.60	1.69	4.75	2.25	1.45	2.67	0.00	6.20	0.60	0.00	1.80	0.72	0.00	0.00	0.82	1.00
55	I8_SR1	SilentIntronRegion	0	0.73	2.16	0.28	3.60	0.00	1.63	1.71	0.31	3.71	1.96	0.00	2.09	0.00	0.61	1.71	4.81	2.28	1.47	2.71	0.00	6.28	0.61	0.00	1.82	0.72	0.00	0.00	0.82	1.02
56	E9_Aa	NovelBoundary	0	0.00	9.50	1.25	0.00	0.00	5.76	0.00	4.18	11.91	1.96	0.00	3.37	0.00	2.35	0.00	6.58	1.26	4.62	8.09	0.00	5.25	0.00	0.00	7.90	0.00	0.00	0.00	0.00	3.73
57	ER9a	ExonRegion	0	107.58	385.88	80.75	651.38	409.24	355.05	381.62	147.88	505.69	262.85	399.09	451.25	230.10	114.87	244.10	193.72	127.20	83.27	586.31	121.39	608.45	110.72	151.86	249.41	231.98	42.55	261.36	195.51	294.57
58	E9_Da	NovelBoundary	0	0.00	4.56	1.54	0.00	0.00	6.91	0.00	0.00	2.77	0.00	0.00	3.73	0.00	0.00	0.00	7.34	8.46	0.00	24.28	0.00	13.68	4.23	0.00	0.00	0.00	0.00	0.00	1.84	2.05
59	E9a_E10a	KnownJunction	0	84.00	313.54	64.98	462.23	278.38	246.55	294.94	116.90	427.80	257.45	416.15	435.78	166.67	115.21	292.80	196.30	101.29	93.88	792.84	94.94	434.92	64.22	163.76	233.28	201.78	18.07	182.69	173.93	193.00
60	I9	Intron	0	2.88	5.21	0.00	1.93	0.00	1.85	1.09	0.50	3.32	0.00	0.00	0.00	0.00	0.36	1.24	3.35	2.82	1.56	3.45	0.00	6.16	0.00	0.00	1.16	0.77	0.00	0.00	0.00	0.00
61	I9_SR1	SilentIntronRegion	0	2.92	5.28	0.00	1.97	0.00	1.88	1.11	0.50	3.38	0.00	0.00	0.00	0.00	0.37	1.26	3.40	2.85	1.58	3.50	0.00	6.20	0.00	0.00	1.18	0.78	0.00	0.00	0.00	0.00
62	E10_Aa	NovelBoundary	0	0.00	8.43	0.00	18.98	6.19	3.03	4.92	0.00	8.50	0.00	0.00	0.00	1.97	0.00	0.00	3.29	5.67	4.62	0.00	0.00	3.77	0.00	0.00	2.57	1.86	0.00	0.00	0.00	5.02
63	ER10a	ExonRegion	0	79.32	392.75	83.56	414.53	294.28	288.98	345.58	126.40	455.00	218.09	386.45	473.44	220.22	117.43	218.95	189.10	132.17	99.87	662.62	107.66	512.82	73.77	145.62	248.57	182.14	35.53	234.12	156.06	197.75
64	E10_Da	NovelBoundary	0	0.00	0.00	0.00	8.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.20	0.00	0.00	0.83	0.00	0.00	4.13	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.40
65	E10a_E11a	KnownJunction	0	127.17	511.03	62.26	344.46	201.90	304.68	353.82	205.98	502.68	267.08	407.99	475.99	228.71	124.94	364.16	195.07	135.30	114.30	768.33	105.94	460.75	119.02	152.58	298.36	205.41	32.96	215.49	113.90	211.98
66	I10	Intron	0	0.84	1.26	0.00	0.00	0.00	0.00	0.00	0.00	0.88	0.00	0.00	0.00	0.00	0.71	0.00	1.95	2.34	1.51	3.76	0.00	6.16	0.00	0.00	0.84	0.00	0.00	0.00	0.64	0.00
67	I10_SR1	SilentIntronRegion	0	0.86	1.29	0.00	0.00	0.00	0.00	0.00	0.00	0.90	0.00	0.00	0.00	0.00	0.73	0.00	1.99	2.40	1.55	3.85	0.00	6.28	0.00	0.00	0.86	0.00	0.00	0.00	0.65	0.00
68	ER11a	ExonRegion	0	50.79	225.53	44.89	224.09	145.61	234.45	223.76	81.69	270.10	135.61	253.82	217.88	128.22	61.27	220.72	123.89	54.96	58.56	383.35	73.74	405.72	51.95	97.36	165.92	99.48	27.66	142.48	75.72	119.27
69	IG28	Intergenic	0	0.70	0.53	0.00	0.00	0.00	0.68	0.33	0.60	1.33	1.06	1.66	2.07	0.11	0.41	1.20	2.03	0.98	0.95	3.40	0.45	3.27	0.00	0.00	1.58	0.12	0.00	0.60	0.53	0.77
70	IG28_SR1	SilentIntergenicRegion	0	0.84	0.71	0.00	0.00	0.00	0.91	0.44	0.81	1.42	1.43	2.16	2.67	0.14	0.55	1.62	2.73	0.98	1.27	3.86	0.61	4.00	0.00	0.00	2.13	0.16	0.00	0.81	0.72	0.88
71	IG28_AR1	ActiveIntergenicRegion	0	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.25	0.00	1.19	2.47	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00