Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CTGF	Gene	0	246.26	38.67	34.21	43.47	92.64	38.79	17.98	4.17	7.65	24.34	22.70	60.43	9.24	301.77	22.87	113.18	104.58	115.61	61.37	26.56	264.74	8.33	476.18	1163.04	462.81	81.35	184.12	30.49	73.41
2	367976	Transcript	0	277.81	38.77	46.77	47.49	86.19	40.12	18.31	3.70	6.13	25.69	19.85	69.25	11.07	356.09	14.60	131.88	121.55	145.62	56.51	30.37	271.10	14.18	605.84	1114.98	478.35	126.81	146.92	41.18	87.86
3	ER1a	ExonRegion	0	69.82	8.60	0.82	10.96	17.82	11.14	5.81	1.01	2.71	3.26	1.33	8.95	2.26	56.08	0.00	44.98	19.64	35.07	11.70	1.61	67.32	4.99	135.79	143.68	58.49	29.01	4.90	6.96	15.53
4	E1_Da	NovelBoundary	0	5.25	0.00	0.00	0.00	0.00	0.00	4.69	0.00	0.00	3.71	0.00	0.00	0.00	11.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.94	0.00	3.64	4.38	0.00	1.66	0.00
5	E1a_E2a	KnownJunction	0	50.90	4.75	3.91	0.00	0.00	7.79	11.04	1.84	1.19	8.51	3.10	11.14	2.55	84.57	0.00	60.89	44.70	32.24	8.09	4.13	47.93	2.33	299.59	164.61	76.04	52.05	4.87	19.59	25.39
6	E2_Aa	NovelBoundary	0	21.71	4.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.39	2.77	0.00	19.56	0.00	7.19	0.00	4.62	0.00	0.00	0.00	0.00	4.73	2.75	8.90	6.05	0.00	2.29	4.89
7	ER2a	ExonRegion	0	90.01	8.09	22.57	12.92	15.84	14.21	3.49	0.54	1.79	6.10	2.65	27.68	3.39	117.08	6.08	45.71	50.70	65.24	11.10	9.86	66.23	7.61	243.47	252.09	107.28	35.66	25.49	13.48	22.02
8	E2_Da	NovelBoundary	0	21.94	0.00	0.00	0.00	0.00	1.88	2.92	0.00	1.22	0.00	0.00	1.42	0.00	24.79	0.00	6.35	0.00	0.00	0.00	3.39	3.65	0.00	2.22	18.78	21.94	8.37	0.00	0.00	5.15
9	E2a_E3a	KnownJunction	1	214.00	25.11	21.60	38.82	53.94	21.14	5.49	4.58	3.08	15.18	5.60	55.03	7.61	243.99	18.34	115.44	108.40	145.64	48.55	26.13	181.98	16.58	477.43	642.42	285.43	90.42	108.99	36.26	53.02
10	I2	Intron	0	35.31	0.00	0.75	0.00	1.10	4.65	0.91	0.42	0.00	0.33	0.00	1.95	0.00	22.06	2.08	6.41	1.01	3.48	0.72	5.07	1.93	0.41	1.63	22.33	16.77	4.61	0.00	0.00	3.48
11	I2_AR1	ActiveIntronRegion	0	35.61	0.00	0.76	0.00	1.11	4.69	0.92	0.42	0.00	0.33	0.00	1.97	0.00	22.26	2.10	6.46	1.02	3.51	0.73	5.12	1.95	0.41	1.65	22.53	16.92	4.65	0.00	0.00	3.51
12	E3_Aa	NovelBoundary	0	75.86	0.00	11.14	21.14	27.12	5.10	2.92	0.00	1.46	4.87	0.00	13.04	0.00	47.64	0.00	21.19	1.31	9.25	8.09	7.44	17.17	0.00	2.41	60.89	46.07	29.05	2.53	4.00	3.37
13	ER3a	ExonRegion	1	327.79	27.96	51.94	27.68	91.13	37.53	13.44	5.12	5.40	19.76	15.40	101.04	13.77	394.92	16.87	140.01	150.43	190.52	42.44	30.92	244.93	14.30	683.77	1032.84	491.49	127.43	121.10	48.98	80.12
14	E3_Da	NovelBoundary	0	51.08	4.85	8.77	20.71	0.00	7.02	0.00	0.00	0.00	3.52	1.33	4.10	1.34	44.42	0.00	21.27	0.00	0.00	0.00	8.10	7.86	2.48	1.87	55.27	17.96	10.56	0.00	0.00	11.95
15	E3a_E4a	KnownJunction	0	330.38	41.69	95.35	74.41	102.42	41.55	27.98	1.89	7.58	34.23	25.62	116.77	20.95	510.91	28.10	171.89	180.86	221.03	72.83	52.02	273.23	17.84	911.61	1313.91	509.48	179.51	142.04	56.75	133.31
16	I3	Intron	0	42.57	3.44	3.91	5.58	3.80	9.63	3.92	0.00	1.09	1.69	0.46	1.93	0.00	30.69	2.14	14.49	0.58	3.12	2.49	10.60	6.11	0.00	0.00	31.82	31.72	12.85	0.71	0.63	9.90
17	I3_AR1	ActiveIntronRegion	0	43.20	3.49	3.97	5.67	3.86	9.78	3.98	0.00	1.11	1.71	0.47	1.96	0.00	31.16	2.17	14.67	0.59	3.17	2.53	10.74	6.20	0.00	0.00	32.30	32.21	13.05	0.72	0.64	10.05
18	E4_Aa	NovelBoundary	0	144.99	22.20	15.22	10.35	20.04	38.21	5.21	0.00	0.00	7.19	0.00	16.72	1.97	130.17	16.74	63.95	7.32	0.00	0.00	22.25	52.34	4.28	122.53	234.72	111.00	30.98	46.42	7.73	39.32
19	ER4a	ExonRegion	0	555.51	63.03	88.65	53.98	134.36	84.89	36.08	9.52	11.41	57.50	43.83	120.13	19.09	713.17	20.84	220.69	235.33	257.34	71.24	62.06	543.30	21.66	1117.01	2098.16	1006.18	246.94	269.28	81.00	179.46
20	E4_Da	NovelBoundary	0	65.18	4.75	13.85	0.00	0.00	33.30	0.00	0.00	1.67	2.04	4.65	1.14	10.41	58.54	15.95	25.78	2.48	9.25	0.00	4.13	13.00	0.00	7.54	66.45	63.50	12.06	0.00	0.00	4.36
21	E4a_E5a	KnownJunction	0	618.64	122.06	105.12	152.71	246.85	101.60	40.79	4.38	12.67	59.56	52.96	123.43	20.79	785.10	9.77	271.42	202.58	259.56	161.62	58.80	719.22	36.37	1140.48	3000.34	1261.20	315.16	403.00	80.97	206.47
22	I4	Intron	0	69.31	7.41	10.18	1.94	3.30	26.22	12.27	0.00	0.23	4.30	7.24	7.01	2.97	73.47	1.99	13.14	7.27	4.26	1.73	9.21	15.82	0.49	7.82	77.12	69.61	46.14	58.23	7.50	36.37
23	I4_AR1	ActiveIntronRegion	0	69.68	7.45	10.23	1.95	3.32	26.35	12.33	0.00	0.23	4.32	7.28	7.05	2.99	73.86	2.00	13.21	7.31	4.28	1.74	9.26	15.91	0.49	7.86	77.53	69.98	46.38	58.54	7.54	36.56
24	E5_Aa	NovelBoundary	0	78.92	0.00	10.51	0.00	0.00	21.14	2.29	0.00	1.28	1.88	0.00	2.89	0.00	74.91	0.00	19.66	1.40	0.00	16.18	3.06	13.48	0.00	0.00	93.79	72.21	7.47	10.34	4.13	10.53
25	ER5a	ExonRegion	0	243.25	47.61	30.95	55.92	113.32	41.26	20.71	4.38	9.38	27.09	28.15	59.10	9.19	298.95	31.39	115.86	101.28	103.91	80.97	27.83	295.72	5.97	443.40	1386.78	509.61	65.07	242.64	26.68	75.39