Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	HECA	Gene	0	34.45	216.07	74.80	56.47	59.85	192.49	34.17	21.43	114.01	148.23	236.72	152.93	65.58	169.08	64.95	95.21	130.06	98.99	112.23	67.53	279.19	36.75	108.31	183.02	91.52	96.80	156.18	112.04	130.85
2	367658	Transcript	0	34.90	116.85	100.34	35.60	45.74	92.54	21.24	29.72	36.41	92.49	147.63	130.72	39.13	150.14	26.72	67.13	117.30	83.21	72.36	50.58	144.46	42.50	103.63	70.92	76.35	107.09	73.51	137.40	79.52
3	IG45_SR1	SilentIntergenicRegion	0	0.00	0.00	1.71	0.00	0.00	0.00	0.00	0.00	0.05	1.31	0.62	0.18	0.00	0.00	7.47	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00
4	IG45_AR1	ActiveIntergenicRegion	0	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	1.12	2.41	1.19	1.24	0.00	0.00	11.20	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
5	IG45_SR2	SilentIntergenicRegion	0	0.00	0.00	1.97	6.96	0.00	6.01	0.98	0.89	0.47	3.11	5.59	1.10	0.63	0.00	10.35	0.00	1.45	0.00	0.00	5.35	5.27	0.00	0.88	1.60	0.00	0.76	0.00	0.00	1.62
6	IG45_SR4	SilentIntergenicRegion	0	0.34	0.20	1.78	1.13	0.31	1.85	0.00	2.60	4.80	5.71	4.33	5.54	0.00	0.95	4.52	0.58	5.67	0.06	0.40	1.72	4.52	1.13	0.79	0.27	1.84	0.39	0.98	0.10	2.47
7	IG45_AR3	ActiveIntergenicRegion	0	0.67	0.00	0.50	0.00	0.00	4.11	0.00	1.16	3.88	3.86	4.31	1.56	0.00	0.27	7.12	0.00	2.59	0.00	0.00	1.30	4.67	0.57	0.00	2.03	0.70	0.00	0.86	0.00	4.62
8	IG45_AR4	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER1a	ExonRegion	0	7.43	5.69	4.23	2.46	1.06	12.31	2.63	1.68	0.29	9.61	2.72	6.93	1.43	15.10	2.09	14.70	6.90	13.50	4.38	5.05	11.00	7.74	12.93	6.14	4.85	21.06	1.24	18.99	7.62
10	E1a_E2a	KnownJunction	0	38.05	11.54	58.50	19.84	20.19	32.38	13.85	11.74	4.57	69.23	49.57	34.04	14.36	85.99	7.57	42.30	41.24	64.73	0.00	27.62	64.62	39.23	71.66	8.25	36.98	51.93	16.00	76.29	27.30
11	Ix_SR2	SilentIntronRegion	0	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.80	0.00	3.57	1.24	0.00	0.00	0.00	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E2_Aa	NovelBoundary	0	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	1	48.31	91.72	129.98	30.54	34.69	82.58	17.45	29.77	12.12	92.74	103.22	101.45	29.23	174.09	16.39	57.21	98.07	102.71	49.67	48.63	124.85	53.71	112.11	46.19	63.57	124.36	36.57	133.44	68.02
14	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.04	2.82	0.00	0.00	4.45	0.00	0.00	1.33	0.00	0.00	3.89	7.22	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
15	E2a_E3a	KnownJunction	1	31.38	147.46	160.60	41.20	66.17	105.13	22.77	59.47	28.20	103.86	224.70	184.64	42.89	212.33	26.51	82.31	169.79	87.85	113.29	68.56	143.84	45.80	163.07	58.32	134.68	179.72	105.81	214.73	86.10
16	Ix	Intron	0	0.49	2.63	0.30	2.93	0.00	3.31	0.73	0.59	0.69	2.29	2.70	1.93	0.91	1.72	1.84	1.82	1.08	1.52	2.03	1.47	5.51	1.31	0.90	0.68	1.36	0.86	0.83	3.48	0.91
17	Ix_SR1	SilentIntronRegion	0	0.49	2.64	0.30	2.94	0.00	3.31	0.73	0.59	0.69	2.30	2.71	1.93	0.91	1.73	1.84	1.82	1.09	1.52	2.03	1.47	5.52	1.31	0.90	0.69	1.37	0.86	0.83	3.49	0.91
18	Ix	Intron	0	1.48	2.78	0.79	0.78	0.80	3.07	0.07	0.13	1.44	2.31	1.88	1.30	0.11	1.95	0.75	1.25	2.82	1.76	1.62	0.81	4.22	0.59	0.39	1.52	0.80	1.23	0.60	1.98	0.10
19	Ix_SR1	SilentIntronRegion	0	1.48	2.79	0.79	0.78	0.80	3.07	0.07	0.13	1.44	2.31	1.88	1.30	0.11	1.96	0.75	1.25	2.82	1.76	1.63	0.81	4.22	0.59	0.39	1.52	0.81	1.23	0.60	1.98	0.10
20	E3_Aa	NovelBoundary	0	0.00	4.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.75	1.54	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	5.37	0.00	0.00	0.00	0.00	0.00	0.00	2.07	0.00
21	ER3a	ExonRegion	1	46.52	118.17	145.54	40.15	54.67	89.74	22.41	48.07	19.03	93.54	184.77	201.06	48.96	201.36	29.45	76.26	187.38	115.14	71.51	59.62	141.85	61.63	140.69	61.72	92.58	186.03	77.26	224.06	94.50
22	E3_Da	NovelBoundary	0	0.00	3.88	4.43	0.00	0.00	1.53	0.00	0.00	2.86	0.00	0.00	3.19	0.00	3.08	0.00	3.75	1.08	0.00	8.09	0.00	2.01	0.00	0.00	5.38	1.89	2.19	0.00	6.16	1.42
23	E3a_E4a	KnownJunction	1	38.52	159.58	136.31	43.14	68.09	73.47	25.86	36.33	29.02	93.11	159.98	201.02	51.75	173.49	16.54	79.33	163.64	88.87	121.39	62.60	160.12	54.06	105.25	65.56	90.28	89.82	63.76	179.14	106.11
24	Ix	Intron	0	3.11	4.52	0.92	1.04	1.13	6.05	0.70	0.27	0.83	3.14	2.86	2.04	0.06	2.98	0.29	4.28	3.50	4.32	4.07	1.68	4.46	0.26	0.52	2.81	1.24	1.00	0.58	3.54	0.56
25	Ix_SR1	SilentIntronRegion	0	2.70	5.05	0.66	1.43	0.65	7.97	1.00	0.37	0.82	3.97	1.94	1.81	0.00	2.79	0.00	5.08	2.85	4.64	5.22	2.02	5.21	0.19	0.36	3.27	1.52	0.33	1.10	3.57	0.42
26	Ix_AR1	ActiveIntronRegion	0	4.32	5.97	1.85	1.77	1.81	6.65	0.37	0.45	1.31	3.09	4.23	2.79	0.00	3.31	0.00	4.23	5.31	4.41	3.61	1.18	4.77	0.52	0.31	1.65	1.00	0.97	0.00	5.59	0.44
27	Ix_SR2	SilentIntronRegion	0	1.59	0.04	0.00	0.00	0.00	1.51	0.00	0.00	0.00	4.51	4.22	3.60	0.00	3.29	0.00	3.22	4.56	1.31	4.02	0.94	2.59	0.00	1.83	1.22	0.86	1.73	0.00	2.13	1.26
28	Ix_AR2	ActiveIntronRegion	0	2.13	3.58	0.52	0.00	2.03	3.89	0.70	0.00	0.22	1.10	3.45	1.96	0.27	2.54	1.02	3.33	2.36	3.68	2.65	1.90	3.29	0.25	0.75	3.54	1.15	1.84	0.51	1.73	0.68
29	Ix_SR3	SilentIntronRegion	0	5.08	2.18	1.19	0.00	0.00	1.41	0.40	0.00	1.63	3.23	1.46	0.25	0.00	4.14	1.12	3.04	4.01	5.87	2.61	1.12	3.66	0.00	0.74	2.70	0.69	2.28	0.00	2.87	1.00
30	E4_Aa	NovelBoundary	0	3.01	14.54	0.00	0.00	0.00	3.91	0.00	0.00	0.00	0.00	0.00	6.20	0.00	3.08	0.00	2.91	0.00	4.62	8.09	0.00	6.46	0.00	0.00	2.81	0.00	4.38	0.00	9.57	0.00
31	ER4a	ExonRegion	0	34.11	283.81	67.24	71.90	75.31	252.18	43.69	20.95	161.66	185.35	308.48	185.89	85.28	188.60	88.51	117.80	154.11	109.64	146.25	81.94	364.91	35.36	119.71	250.23	111.49	96.69	213.90	115.17	166.98