Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	FBXO5	Gene	0	40.01	133.07	38.68	180.31	57.98	134.05	125.46	104.68	81.45	70.17	89.29	81.30	57.69	39.10	77.51	55.78	24.86	41.15	178.49	79.65	253.80	102.74	96.99	58.69	51.77	21.22	64.22	36.79	84.99
2	367241	Transcript	0	20.91	16.45	41.05	41.63	36.37	41.21	35.26	53.08	8.23	24.47	30.85	15.42	10.76	20.82	7.80	19.72	12.35	16.69	40.37	54.25	35.52	37.22	14.73	23.21	14.45	9.16	7.48	12.13	19.66
3	229758	Transcript	0	48.90	23.73	10.49	78.02	8.73	29.35	34.58	75.18	7.12	15.77	14.62	27.34	19.94	19.85	4.93	25.33	8.43	13.59	66.72	33.21	92.27	168.46	55.86	17.64	18.23	15.62	26.85	6.17	19.92
4	477822	Transcript	0	5.78	9.66	1.13	9.54	3.75	10.41	4.24	2.82	5.48	4.30	1.79	3.79	0.87	2.12	7.85	5.52	2.20	6.02	23.59	2.48	11.56	0.74	0.91	2.14	2.56	1.73	1.31	2.11	1.41
5	IG9	Intergenic	0	1.93	0.00	1.50	12.90	1.47	0.82	0.60	0.55	0.00	1.30	0.00	0.00	0.00	0.68	0.00	0.00	0.00	1.16	0.96	2.48	0.43	1.08	0.00	0.00	2.14	0.00	0.00	0.98	0.40
6	IG9_AR1	ActiveIntergenicRegion	0	1.95	0.00	1.52	13.06	1.48	0.83	0.61	0.56	0.00	1.31	0.00	0.00	0.00	0.69	0.00	0.00	0.00	1.17	0.97	2.51	0.43	1.09	0.00	0.00	2.17	0.00	0.00	0.99	0.41
7	ER1a	ExonRegion	0	14.04	18.35	29.57	34.72	22.04	32.51	42.14	68.54	9.03	21.73	20.67	19.46	9.43	17.51	15.60	29.89	14.58	14.89	32.19	47.55	31.74	46.92	19.71	16.15	15.04	13.94	7.86	21.97	26.70
8	E1_Da	NovelBoundary	0	2.95	0.00	8.30	0.00	19.75	5.10	0.00	4.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.08	0.00	0.00	3.23	10.19	0.00	0.00	0.00	0.00	0.00	0.00	4.54	0.00
9	E1a_E3a	KnownJunction	0	27.78	14.54	52.52	48.53	50.70	49.92	28.38	37.62	7.43	27.20	41.03	11.39	12.10	24.13	0.00	9.56	10.13	18.49	48.55	60.95	39.31	27.52	9.75	30.27	13.87	4.38	7.11	2.29	12.61
10	I1	Intron	0	2.54	0.00	4.36	11.90	1.16	2.93	3.35	3.06	0.40	3.08	0.85	0.59	0.77	2.69	0.00	3.79	1.06	4.65	3.79	2.89	5.08	2.15	2.57	0.51	1.36	1.12	0.43	1.16	1.27
11	I1_AR1	ActiveIntronRegion	0	1.61	0.00	2.57	13.66	0.00	2.00	0.00	1.19	0.00	1.38	0.00	0.53	0.00	3.25	0.00	1.60	0.06	3.69	3.93	4.01	0.57	0.19	0.00	1.11	0.13	0.00	0.00	0.00	0.14
12	I1_SR1	SilentIntronRegion	0	2.30	0.00	6.94	9.72	0.00	3.86	5.43	2.90	0.67	4.54	0.74	1.10	0.92	2.19	0.00	0.90	2.03	2.53	1.60	2.64	5.39	3.52	3.53	0.42	1.67	2.07	0.22	1.09	3.11
13	I1_AR2	ActiveIntronRegion	0	3.95	0.00	3.08	13.23	3.95	2.84	4.29	5.35	0.48	3.12	1.93	0.00	1.42	2.81	0.00	10.04	0.92	8.58	6.61	2.10	9.69	2.55	4.19	0.00	2.31	1.12	1.19	2.54	0.15
14	E2_Aa	NovelBoundary	0	40.58	49.25	41.13	431.17	117.60	65.22	103.96	63.90	26.92	35.39	35.68	74.85	27.35	14.62	16.74	22.49	17.89	36.99	104.98	20.34	110.78	172.25	205.77	14.24	18.87	23.39	76.48	69.01	73.06
15	ER2a	ExonRegion	0	20.93	10.52	14.01	108.38	10.09	24.68	35.34	38.78	4.22	9.46	15.80	17.85	15.42	9.56	9.85	9.44	7.13	13.31	20.14	11.68	65.16	59.86	44.09	5.31	7.55	13.77	10.96	10.50	26.00
16	E2_Da	NovelBoundary	0	2.54	0.00	0.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.75	0.00	5.14	0.00	0.00	0.00	0.00	0.00	0.00	1.48	1.63	0.00	2.29	0.00
17	E2a_E3a	KnownJunction	0	76.86	36.94	6.98	47.67	7.37	34.03	33.81	111.58	10.02	22.09	13.44	36.84	24.46	30.13	0.00	41.23	9.72	13.87	113.29	54.75	119.37	277.07	67.62	29.97	28.91	17.47	42.74	1.84	13.83
18	I2	Intron	0	1.74	4.06	0.60	1.65	0.98	5.20	0.48	0.55	1.05	1.57	1.33	2.05	0.07	1.16	1.45	3.18	1.40	2.45	8.05	1.17	4.65	0.43	0.29	0.77	0.70	0.25	0.29	0.65	0.41
19	I2_SR1	SilentIntronRegion	0	1.27	1.41	0.43	0.80	0.63	4.07	0.41	0.17	0.94	1.15	1.28	1.35	0.00	0.91	0.79	2.33	0.91	2.23	6.49	0.81	4.05	0.25	0.34	0.32	0.42	0.06	0.20	0.45	0.21
20	I2_AR1	ActiveIntronRegion	0	1.67	7.38	0.73	1.05	0.41	6.75	0.82	0.15	0.76	1.09	0.84	1.55	0.00	1.02	5.91	2.42	1.25	2.39	10.11	1.74	4.79	0.23	0.00	1.44	0.84	0.79	0.77	0.68	0.73
21	I2_SR2	SilentIntronRegion	0	1.44	2.04	0.63	0.92	2.32	9.62	1.92	0.00	0.03	0.00	0.75	0.84	0.00	2.33	3.26	7.47	0.80	1.56	11.47	1.26	3.85	0.00	0.00	0.00	0.33	0.00	2.72	0.00	0.00
22	I2_AR2	ActiveIntronRegion	0	2.14	6.57	0.00	0.00	1.66	8.25	2.02	0.00	0.00	0.00	1.19	1.24	0.00	1.81	5.60	0.00	1.00	2.73	9.05	0.00	4.75	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00
23	I2_AR3	ActiveIntronRegion	0	1.92	6.57	0.00	0.00	0.00	10.13	0.42	0.00	0.00	0.00	1.25	1.82	0.00	1.43	5.01	0.00	2.00	2.59	9.05	0.00	4.28	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00
24	I2_AR4	ActiveIntronRegion	0	4.37	3.60	0.81	0.87	1.18	5.84	0.00	1.12	2.38	2.62	1.56	3.57	0.00	1.30	0.56	8.03	2.22	3.32	7.74	2.00	3.95	0.66	1.10	1.04	1.39	0.38	0.00	0.99	0.00
25	I2_AR5	ActiveIntronRegion	0	0.00	0.00	0.43	0.00	0.00	0.22	0.00	7.95	0.00	2.40	1.68	0.96	0.00	0.64	0.00	1.67	0.11	0.00	5.55	0.00	0.00	3.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	I2_SR3	SilentIntronRegion	0	2.01	9.11	0.88	4.47	1.96	6.55	0.54	1.25	1.15	2.61	1.69	3.62	0.32	1.71	0.82	3.57	2.46	2.86	10.61	1.47	6.55	0.84	0.08	1.53	1.08	0.42	0.16	1.09	0.95
27	E3_Aa	NovelBoundary	0	2.77	0.00	0.00	0.00	0.00	9.94	2.80	0.00	0.00	0.00	0.00	4.16	1.46	2.06	8.57	9.87	2.12	4.62	8.09	0.00	3.93	0.00	0.00	0.00	1.78	0.00	0.00	0.00	0.00
28	ER3a	ExonRegion	0	96.17	232.09	105.36	389.93	127.15	311.86	279.02	251.37	115.00	172.56	256.71	181.56	120.37	97.65	92.81	116.43	52.67	86.74	316.83	175.41	601.42	260.95	259.55	130.46	128.52	58.35	178.85	94.20	196.24
29	E3_Da	NovelBoundary	0	11.80	34.32	2.59	21.57	0.00	7.33	5.61	0.00	0.00	5.75	10.60	1.20	3.03	0.00	0.00	9.87	0.00	0.00	16.18	0.00	16.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E3a_E4b	KnownJunction	0	94.49	233.07	85.71	368.62	97.71	342.09	335.39	241.56	189.96	161.86	199.99	206.05	163.30	74.76	132.75	124.77	59.42	104.80	444.86	205.09	801.93	221.06	282.69	152.53	152.49	45.23	252.86	75.26	198.41
31	E3a_E4c	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	0.00	0.00	1.93	0.00	0.00	2.29	0.00
32	I3	Intron	0	2.66	7.12	0.14	4.75	1.62	5.81	2.50	2.44	1.21	1.79	0.89	1.58	0.59	1.83	1.98	3.17	0.25	1.91	9.26	0.46	5.67	0.75	0.60	1.61	1.42	0.13	0.00	0.67	0.11
33	I3_SR1	SilentIntronRegion	0	2.67	7.15	0.14	4.76	1.62	5.83	2.51	2.45	1.21	1.80	0.89	1.59	0.59	1.84	1.99	3.18	0.25	1.92	9.29	0.46	5.69	0.75	0.60	1.61	1.42	0.13	0.00	0.68	0.11
34	E4_Aa	NovelBoundary	0	0.00	0.00	1.20	0.00	0.00	0.00	2.35	0.00	1.52	1.72	4.40	3.31	0.00	0.97	0.00	9.64	1.26	4.62	0.00	3.80	3.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.29
35	ER4a	ExonRegion	0	7.04	5.71	1.70	7.67	2.74	9.72	2.65	3.26	4.20	5.87	1.91	4.14	1.31	1.97	6.35	5.25	2.06	7.66	20.18	2.65	10.32	1.02	1.08	2.20	3.97	3.14	1.28	3.63	2.04
36	E4_Ab	KnownBoundary	0	0.00	4.17	0.00	19.41	0.00	3.57	2.57	0.00	3.17	7.07	0.00	2.44	2.42	1.02	0.00	0.00	1.17	10.02	8.09	0.00	12.59	0.00	0.00	3.05	9.24	1.93	5.96	1.71	3.47
37	ER4b	ExonRegion	0	85.24	213.23	70.87	464.76	117.12	250.88	248.07	220.44	135.15	151.85	228.28	195.06	137.32	78.16	108.53	100.81	51.46	78.24	306.00	185.16	491.25	218.09	237.93	146.21	140.85	38.66	152.44	79.20	153.96
38	E4_Da	KnownBoundary	0	13.57	26.18	0.00	20.71	0.00	7.48	5.38	0.00	9.53	0.00	2.91	0.00	0.00	3.41	9.97	0.00	2.41	5.27	24.28	0.00	23.95	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00
39	E4a_E4c	KnownJunction	0	88.83	235.98	61.14	484.66	124.09	225.49	266.62	250.97	169.10	137.53	168.80	186.95	170.34	81.00	103.85	121.10	57.06	46.23	267.05	115.37	534.47	283.44	216.94	130.52	153.09	29.74	154.36	84.34	190.65
40	ER4c	ExonRegion	0	4.53	13.61	0.55	11.40	4.76	11.09	5.84	2.38	6.76	2.73	1.66	3.43	0.43	2.27	9.35	5.78	2.34	4.37	26.99	2.32	12.80	0.45	0.75	2.07	1.15	0.32	1.34	0.59	0.78
41	E4_Ac	KnownBoundary	0	2.95	16.09	0.00	9.92	6.48	11.63	2.92	4.38	9.93	0.00	0.00	1.45	0.00	0.00	26.71	0.00	2.52	0.00	0.00	3.23	5.70	0.00	0.00	8.73	0.00	0.00	0.00	4.58	0.00
42	ER4d	ExonRegion	0	109.82	287.57	91.81	519.68	163.32	251.61	287.23	299.85	193.28	198.43	231.42	224.33	173.19	92.73	129.61	124.76	56.43	89.93	362.59	172.39	562.73	281.94	275.37	169.04	167.84	44.09	182.84	106.58	245.83
43	E4_Db	NovelBoundary	0	0.00	3.88	0.00	18.12	0.00	1.80	0.00	0.00	4.32	0.00	0.00	1.45	0.00	1.00	0.00	0.00	0.00	4.62	0.00	0.00	7.90	0.00	2.51	0.00	0.00	0.00	0.00	0.00	1.68
44	E4b_E5a	KnownJunction	0	107.35	292.01	96.10	630.90	198.21	245.25	329.96	295.56	273.92	184.71	204.90	233.76	156.45	84.13	149.49	168.07	58.82	57.02	444.64	155.97	481.32	264.53	251.32	144.99	150.86	36.31	126.48	76.83	232.51
45	I4	Intron	0	1.48	9.65	0.11	2.71	1.85	4.76	0.89	0.23	1.80	0.55	0.82	1.28	0.00	0.48	4.40	1.43	0.19	2.43	13.07	0.17	4.13	0.34	0.46	2.57	0.54	0.00	0.00	0.10	0.08
46	I4_SR1	SilentIntronRegion	0	1.49	9.69	0.11	2.72	1.85	4.78	0.89	0.23	1.81	0.55	0.83	1.29	0.00	0.49	4.41	1.44	0.19	2.43	13.12	0.17	4.15	0.34	0.46	2.58	0.54	0.00	0.00	0.10	0.08
47	E5_Aa	NovelBoundary	0	4.60	0.00	0.00	0.00	14.44	1.88	2.23	2.04	1.34	0.00	1.55	0.00	0.00	0.00	0.00	0.00	2.63	0.00	0.00	0.00	3.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05
48	ER5a	ExonRegion	0	44.72	282.51	39.70	261.04	85.87	215.62	202.62	126.27	192.36	89.67	93.48	121.27	94.23	50.94	201.68	88.58	37.39	62.60	355.25	123.13	401.51	122.10	110.99	87.59	59.04	20.30	72.54	38.43	124.55
49	IG8	Intergenic	0	0.00	0.19	0.00	0.00	0.00	0.34	0.17	0.00	0.00	0.36	0.00	0.00	0.00	0.22	0.00	0.00	0.00	0.32	0.53	0.00	5.65	0.30	0.30	1.07	0.12	0.39	0.00	0.00	0.11
50	IG8_AR1	ActiveIntergenicRegion	0	0.00	2.92	0.00	0.00	0.00	0.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	IG8_SR1	SilentIntergenicRegion	0	0.00	0.15	0.00	0.00	0.00	0.34	0.17	0.00	0.00	0.37	0.00	0.00	0.00	0.23	0.00	0.00	0.00	0.32	0.54	0.00	5.75	0.30	0.30	1.08	0.12	0.40	0.00	0.00	0.11