Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	VTA1	Gene	0	123.39	233.84	133.90	386.41	190.15	216.12	218.96	179.58	170.00	146.64	236.87	196.33	131.63	155.45	220.05	110.27	101.39	114.71	417.35	299.72	367.80	191.00	209.17	177.89	181.00	101.30	134.20	164.91	317.88
2	367630	Transcript	0	104.07	128.78	35.77	120.38	45.88	154.18	158.54	112.69	61.07	141.25	167.20	121.76	85.45	117.93	135.40	130.71	65.85	125.45	283.57	264.58	275.15	167.06	170.52	128.53	170.84	86.41	50.28	99.13	183.39
3	367621	Transcript	0	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.83	4.62	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	452973	Transcript	0	16.04	9.70	10.36	42.28	14.00	10.90	19.34	19.51	7.31	10.11	21.76	7.14	7.55	10.26	0.00	0.00	1.40	23.89	8.09	7.77	25.99	11.28	10.93	8.19	7.84	8.45	5.07	0.00	11.06
5	427932	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	491881	Transcript	0	1.37	2.00	0.93	2.29	0.09	1.44	0.00	0.01	3.22	1.92	0.82	1.02	0.41	0.31	0.07	0.81	0.02	1.84	7.61	0.25	3.05	0.09	0.98	1.58	0.05	0.73	0.08	0.50	0.10
7	ER1a	ExonRegion	0	3.98	9.62	13.71	43.09	62.45	4.57	5.69	6.38	3.73	4.49	7.27	3.67	1.99	3.50	3.20	7.23	2.29	15.89	16.16	16.86	11.92	7.66	14.92	2.38	5.36	12.97	2.62	3.03	7.86
8	ER1b	ExonRegion	0	131.54	130.52	257.03	792.50	401.47	147.49	167.90	174.77	50.95	135.02	235.22	225.71	132.92	136.30	119.78	144.04	142.79	124.35	241.56	239.30	282.83	265.89	316.65	88.94	156.45	152.34	220.11	242.13	336.51
9	E1a_E2a	KnownJunction	0	60.70	84.93	59.22	127.04	42.44	60.01	62.25	78.73	49.09	59.04	47.74	60.21	60.19	70.30	50.23	17.90	39.95	36.86	89.02	143.07	114.27	108.76	67.57	101.27	71.49	35.45	29.92	40.57	140.37
10	E1a_E6a	KnownJunction	0	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.83	4.62	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E2_Aa	NovelBoundary	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER2a	ExonRegion	0	248.51	272.09	39.23	206.14	73.52	315.26	217.45	307.65	101.91	203.31	224.38	158.24	123.71	226.91	185.29	198.41	90.34	205.03	422.47	587.61	601.96	472.39	216.31	233.23	318.95	137.97	51.26	122.97	248.81
13	E2a_E6a	KnownJunction	0	207.16	277.28	66.67	225.61	50.99	391.08	507.32	170.70	150.62	439.40	556.61	386.68	241.38	288.97	438.30	430.00	195.65	368.08	890.17	575.34	647.58	246.49	553.81	305.78	458.41	245.68	167.58	329.08	519.93
14	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER5a	ExonRegion	0	0.00	3.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER6a	ExonRegion	0	213.14	320.82	327.30	621.23	415.34	451.39	404.55	207.77	147.65	361.86	684.94	431.78	260.31	327.83	249.14	197.63	241.88	204.75	602.82	631.52	617.55	272.71	568.74	327.78	409.62	219.49	437.51	461.53	602.15
18	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E6a_E7a	KnownJunction	0	284.90	445.49	648.81	1271.07	676.88	551.04	523.17	277.84	186.00	357.47	588.75	365.35	332.20	417.87	392.66	214.27	224.85	209.21	816.89	882.40	785.20	424.43	513.43	375.16	460.23	201.22	256.84	391.53	672.25
20	I6_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER7a	ExonRegion	0	298.73	443.85	534.14	1452.04	652.71	568.14	487.02	277.52	205.55	380.57	594.07	386.69	285.95	393.09	312.38	216.11	184.71	257.22	733.84	819.75	781.13	394.85	439.93	419.64	501.23	190.44	218.07	321.10	641.66
22	E7_Da	NovelBoundary	0	0.00	3.68	0.00	0.00	0.00	1.65	0.00	0.00	4.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.01	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00
23	E7a_E8a	KnownJunction	0	373.85	447.33	451.73	1466.06	615.57	668.25	478.77	476.91	302.97	409.92	626.08	446.53	306.22	410.43	304.96	212.59	192.61	372.83	784.97	793.99	864.26	563.81	463.19	456.51	509.71	220.79	192.53	379.72	617.88
24	E7a_E9a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.76	2.63	2.44	0.00	0.00	3.23	0.00	0.00	2.13	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.00	0.00	0.00	6.43	1.75
25	I7_SR2	SilentIntronRegion	0	0.15	0.88	0.00	0.00	0.00	0.41	0.14	0.00	2.69	0.30	0.77	0.41	0.13	0.50	1.26	1.02	0.31	0.66	0.44	0.60	1.64	0.25	0.00	0.11	0.68	0.29	0.00	0.90	0.60
26	I7_SR3	SilentIntronRegion	0	0.20	0.99	0.31	0.00	0.22	0.79	0.00	0.42	3.10	0.86	2.05	1.10	0.33	0.64	2.21	0.91	1.16	0.99	1.17	1.23	3.35	0.00	0.58	1.79	1.12	0.23	1.01	1.80	1.04
27	I7_SR4	SilentIntronRegion	0	0.91	0.50	0.18	0.36	0.00	0.42	1.23	0.00	0.80	0.51	0.85	0.53	0.00	0.82	1.31	0.88	0.42	1.17	1.46	0.00	3.19	0.27	0.37	0.22	0.15	0.00	1.49	0.41	0.34
28	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.15	0.00	0.00	4.43	0.00	0.00	0.00	3.82	2.61	0.00	0.00	0.00	0.00	0.00	2.51	0.00	5.46	0.00	0.00	1.75	0.00
29	ER8a	ExonRegion	0	373.16	443.19	341.03	911.20	323.39	578.69	585.58	482.36	229.13	444.32	693.53	448.25	300.16	457.41	299.66	225.75	269.48	290.79	763.62	728.33	835.91	562.04	662.65	387.34	561.32	308.50	330.36	516.89	749.44
30	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	I8_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	2.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.95	0.00	0.00	2.85	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
32	ER9a	ExonRegion	0	427.76	361.71	483.18	799.27	299.74	425.58	497.69	718.34	248.55	331.53	504.24	419.74	311.21	387.88	264.75	213.80	235.78	296.25	677.44	602.47	684.14	750.78	596.49	316.78	501.84	344.37	224.14	470.15	766.86
33	E9_Da	KnownBoundary	0	8.26	0.00	2.87	0.00	0.00	3.68	0.00	0.00	1.46	5.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	3.56	1.76	0.00	2.46	2.27	0.00	3.91	0.00	0.00	0.00
34	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E9a_E11a	KnownJunction	0	16.04	9.70	10.36	42.28	14.00	10.90	19.34	19.51	7.31	10.11	21.76	7.14	7.55	10.26	0.00	0.00	1.40	23.89	8.09	7.77	25.99	11.28	10.93	8.19	7.84	8.45	5.07	0.00	11.06
36	ER9b	ExonRegion	0	1.37	2.00	0.93	2.29	0.09	1.44	0.00	0.01	3.22	1.92	0.82	1.02	0.41	0.31	0.07	0.81	0.02	1.84	7.61	0.25	3.05	0.09	0.98	1.58	0.05	0.73	0.08	0.50	0.10
37	E9_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.41	1.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00
38	E10_Aa	NovelBoundary	0	2.36	3.97	0.00	0.00	0.00	5.64	0.00	0.00	4.66	2.04	5.95	4.82	0.00	0.82	0.00	3.37	2.12	4.62	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	2.11	4.09
39	ER10a	ExonRegion	0	403.45	429.27	506.95	1226.36	453.57	421.97	568.42	699.27	244.62	369.07	517.27	403.93	306.10	362.25	311.01	271.10	233.66	286.43	713.85	576.71	742.50	685.22	744.94	328.17	490.83	374.30	222.41	583.55	786.48
40	E10_Da	NovelBoundary	0	2.36	0.00	0.00	0.00	0.00	1.96	0.00	0.00	1.55	2.04	4.56	1.42	0.00	0.00	9.97	0.00	1.35	0.00	8.09	3.64	3.37	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00
41	E10a_E11a	KnownJunction	0	396.09	375.00	452.63	782.10	415.88	297.85	483.58	623.57	224.19	298.39	525.36	294.90	294.21	292.78	324.49	130.66	164.12	183.91	565.57	574.35	589.46	563.38	555.49	326.23	467.84	227.45	248.93	436.64	643.10
42	I10	Intron	0	0.55	3.26	0.17	1.52	0.33	2.31	0.65	0.21	1.63	1.16	0.53	1.02	0.15	0.78	2.88	1.13	0.85	1.14	3.53	0.82	3.29	0.22	0.18	0.94	0.46	0.16	0.18	0.36	0.48
43	I10_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	3.37	2.17	2.01	1.16	0.00	0.00	0.00	0.00	0.00	0.00	4.53	0.00	1.43	0.00	0.00	0.00	0.18	0.00	0.00	0.00	0.00
44	I10_AR2	ActiveIntronRegion	0	0.27	2.63	0.28	0.91	0.62	2.73	0.33	0.00	3.83	2.43	1.28	1.11	0.00	0.88	3.15	0.63	0.19	0.73	3.46	0.35	3.19	0.46	0.23	0.55	0.48	0.40	0.00	0.21	0.00
45	I10_AR3	ActiveIntronRegion	0	0.00	6.93	0.00	0.83	0.00	2.12	0.51	0.00	1.17	0.74	0.28	1.21	0.00	1.48	1.48	0.29	0.35	0.97	3.54	0.00	3.27	0.00	0.00	1.09	0.00	0.34	0.00	0.00	0.46
46	I10_AR4	ActiveIntronRegion	0	0.00	3.28	0.00	0.00	0.00	0.00	4.03	0.00	5.62	0.00	0.00	2.57	0.00	1.81	0.00	1.75	0.00	0.00	0.00	0.00	7.13	0.00	0.00	0.00	0.00	0.73	0.00	0.00	0.00
47	I10_SR3	SilentIntronRegion	0	0.43	2.31	0.05	1.76	0.00	1.71	2.11	0.00	0.46	2.14	0.00	0.90	0.47	0.38	1.35	1.11	1.10	0.55	0.78	0.58	3.72	0.00	0.00	0.00	0.54	0.00	0.00	0.00	0.44
48	I10_AR5	ActiveIntronRegion	0	0.93	2.68	0.28	1.42	0.43	3.41	0.36	0.00	0.80	2.17	0.42	0.11	0.23	0.77	2.94	2.42	0.79	2.21	6.36	1.50	3.06	0.16	0.32	1.33	0.94	0.00	0.00	0.14	0.80
49	I10_SR4	SilentIntronRegion	0	0.35	4.58	0.00	3.16	0.49	2.34	0.40	0.56	1.06	0.65	0.18	0.50	0.46	0.70	3.05	1.09	1.20	1.80	2.97	0.91	4.80	0.18	0.00	1.30	0.65	0.32	0.74	0.33	0.80
50	E11_Aa	NovelBoundary	0	2.60	4.27	0.00	8.20	0.00	0.00	0.00	1.99	2.80	1.64	0.00	1.11	0.00	1.13	0.00	0.00	0.00	0.00	8.09	2.98	0.00	0.00	0.00	2.51	0.00	7.51	0.00	0.00	0.00
51	ER11a	ExonRegion	0	222.67	463.84	244.61	673.43	318.41	388.17	384.65	297.08	303.71	262.15	434.13	322.85	233.89	262.88	375.36	165.45	178.69	198.15	788.83	519.65	670.81	311.13	343.31	325.53	336.47	184.22	267.41	299.25	633.13
52	E11_Da	KnownBoundary	1	89.66	390.13	13.75	472.58	330.11	313.50	300.84	89.18	320.97	119.88	175.54	213.64	153.52	124.90	375.32	148.10	85.49	126.25	752.60	428.96	603.10	78.91	145.09	121.07	91.99	44.33	121.41	92.15	428.05
53	ER11b	ExonRegion	0	32.82	151.21	21.54	159.58	100.04	110.46	113.28	63.10	148.38	58.93	97.86	113.19	67.73	69.97	190.69	66.23	46.70	51.14	285.05	150.46	208.20	48.57	65.58	106.93	56.61	24.24	60.17	46.80	143.12
54	ER11c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	IG14_AR1	ActiveIntergenicRegion	0	0.00	2.25	0.44	1.25	3.41	4.31	0.00	0.00	1.12	1.51	4.26	5.53	1.18	1.50	1.44	0.00	0.91	1.18	2.51	1.13	4.23	0.47	1.26	2.44	1.12	1.10	3.83	0.99	0.41
56	IG14_SR2	SilentIntergenicRegion	0	0.37	3.67	0.43	1.24	7.82	2.38	0.35	0.80	0.90	1.75	3.40	3.50	2.37	1.84	1.43	1.60	1.03	1.70	5.58	1.43	5.87	0.94	2.49	6.14	1.61	1.36	4.12	0.99	0.52
57	IG14_AR2	ActiveIntergenicRegion	0	0.54	3.47	0.28	0.60	1.84	2.64	0.17	0.62	2.27	1.69	4.08	3.02	3.23	2.15	2.39	1.75	1.12	2.25	2.36	0.46	3.39	0.90	2.13	2.88	0.84	1.05	1.38	0.37	0.56