Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	GOPC	Gene	0	33.34	167.76	58.09	97.03	90.06	110.52	49.52	30.63	96.44	111.00	147.96	127.72	44.83	90.30	112.52	137.35	80.00	123.12	382.04	70.86	208.22	26.20	93.55	101.98	88.41	40.01	74.87	73.81	105.13
2	52569	Transcript	1	26.98	57.95	71.92	87.14	97.22	52.40	20.30	18.55	25.30	78.73	80.13	75.33	25.91	56.21	4.88	89.06	45.06	108.02	228.16	50.07	93.13	36.39	92.05	22.65	56.40	43.03	36.62	74.11	49.99
3	368498	Transcript	0	3.32	9.00	20.21	0.00	0.00	6.36	1.30	2.23	5.07	11.88	2.79	19.45	4.21	6.24	5.06	15.56	8.91	4.98	17.08	4.51	4.30	6.64	7.99	8.14	7.37	1.31	1.75	2.52	2.58
4	467125	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER1a	ExonRegion	1	12.91	1.99	21.54	48.75	76.99	11.88	1.87	3.41	1.21	9.03	6.46	8.55	2.97	7.37	0.00	24.82	9.71	34.19	19.78	6.69	13.94	10.79	30.69	3.08	3.53	9.72	7.24	24.34	11.20
6	E1_Ab	KnownBoundary	0	2.83	0.00	13.43	0.00	0.00	8.79	0.00	0.00	0.00	4.79	4.37	1.23	1.91	1.26	0.00	10.71	5.42	13.87	8.09	3.47	2.05	2.38	9.06	5.32	0.00	0.00	2.14	8.27	1.68
7	ER1b	ExonRegion	1	35.39	37.09	78.71	64.84	55.64	41.52	13.11	21.44	8.88	55.10	45.19	47.91	20.28	66.00	8.79	80.12	31.03	117.42	126.75	34.98	76.35	37.41	82.37	21.61	40.04	34.06	16.43	51.15	42.50
8	E1_Da	NovelBoundary	0	2.77	4.07	0.00	0.00	0.00	1.92	2.92	2.24	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	1.40	4.62	0.00	0.00	3.93	2.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E1a_E2a	KnownJunction	0	60.40	79.89	70.53	102.24	99.48	85.02	44.74	56.78	17.78	158.54	111.80	116.65	63.15	119.47	24.72	174.72	43.42	144.87	428.90	73.77	173.12	79.49	160.11	56.94	127.18	85.87	11.08	98.40	78.67
10	E1a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	3.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I1_SR1	SilentIntronRegion	0	0.98	0.33	0.31	1.32	1.79	1.14	3.56	0.68	1.64	1.59	0.44	0.81	0.24	0.40	0.00	1.69	1.02	7.44	8.82	0.51	4.27	0.33	1.00	1.03	0.26	0.86	0.00	0.60	0.86
12	I1_AR2	ActiveIntronRegion	0	2.35	2.56	0.58	5.67	0.00	2.93	1.41	0.00	0.52	0.30	0.96	1.83	0.00	1.05	0.00	0.57	1.08	8.01	9.88	0.64	2.25	0.00	0.83	0.80	1.13	0.00	0.63	0.38	0.23
13	ER2a	ExonRegion	1	56.86	148.86	105.52	73.57	77.17	99.80	31.82	45.48	33.37	149.67	155.01	136.11	42.11	133.72	24.10	162.84	71.50	161.07	305.21	68.41	187.62	63.51	157.20	59.35	137.56	67.32	41.34	91.74	89.62
14	E2_Da	NovelBoundary	0	28.25	0.00	6.73	9.92	0.00	3.64	5.66	3.68	1.52	10.75	0.00	3.10	0.00	8.22	7.37	17.14	5.83	18.49	8.09	0.00	8.94	0.00	0.00	2.81	3.52	6.48	0.00	2.11	0.00
15	E2a_E3a	KnownJunction	0	0.00	8.63	7.10	0.00	0.00	6.29	0.00	0.00	9.53	16.66	1.61	12.62	6.24	4.76	9.57	17.44	9.30	4.62	8.09	4.13	7.90	7.44	5.02	2.69	9.09	0.00	0.00	2.02	1.35
16	E2a_E4a	KnownJunction	1	41.05	113.92	122.31	125.53	117.46	92.93	38.73	33.69	49.39	148.44	153.81	142.11	48.85	105.04	9.77	153.30	80.40	181.86	436.54	93.45	172.31	61.99	153.41	42.23	109.26	76.34	66.00	123.88	88.77
17	I2	Intron	0	2.70	7.23	0.60	0.86	0.88	10.21	2.30	1.77	2.52	3.81	1.93	3.03	0.19	2.68	2.65	13.06	8.41	10.26	11.10	5.62	6.76	0.00	0.87	0.51	1.63	0.28	0.00	1.07	1.80
18	I2_SR1	SilentIntronRegion	0	1.82	8.71	0.51	0.00	0.00	6.12	1.91	0.99	1.12	5.75	2.62	1.83	0.21	1.95	1.01	11.70	5.32	9.60	10.61	3.21	4.86	0.00	1.15	0.67	2.02	0.25	0.00	1.82	0.98
19	I2_AR1	ActiveIntronRegion	0	3.27	6.39	0.67	1.40	1.43	12.83	2.56	2.26	3.40	2.65	1.51	3.80	0.19	3.16	3.68	14.02	10.41	10.76	11.54	7.17	8.00	0.00	0.71	0.42	1.41	0.31	0.00	0.61	2.32
20	E3a_E4a	KnownJunction	0	5.84	8.24	28.20	0.00	0.00	6.94	2.63	4.48	0.00	5.75	3.23	21.29	1.94	6.25	0.00	13.31	6.26	4.62	24.28	4.13	0.00	4.38	9.46	11.96	4.93	2.02	2.29	2.29	3.53
21	ER3a	ExonRegion	0	4.11	10.13	25.34	0.00	0.00	5.84	1.26	2.22	5.66	13.23	3.52	24.43	4.44	7.71	5.60	15.92	11.19	5.69	18.86	5.27	4.99	8.11	9.49	9.77	8.10	1.90	2.98	3.26	2.85
22	I3	Intron	0	4.69	4.54	0.86	3.71	0.89	14.38	3.37	1.46	5.45	7.55	2.35	2.83	0.12	3.10	3.02	18.63	10.40	10.75	11.66	6.65	8.85	0.16	0.22	1.77	2.22	0.38	0.28	1.04	1.16
23	I3_AR1	ActiveIntronRegion	0	6.36	3.40	2.22	5.71	1.95	18.42	6.04	1.67	3.95	13.51	3.32	4.59	0.26	4.37	3.50	21.27	12.97	11.71	9.76	5.75	10.35	0.48	0.72	2.01	2.79	0.39	0.00	1.95	0.71
24	I3_SR1	SilentIntronRegion	0	2.62	3.44	0.00	0.00	0.00	4.39	0.70	0.50	0.70	3.69	0.23	0.47	0.00	0.59	2.49	2.53	10.75	6.02	2.95	0.00	4.57	0.00	0.00	0.00	0.64	0.20	0.00	0.00	0.28
25	I3_AR2	ActiveIntronRegion	0	4.29	4.95	0.49	3.28	0.61	13.65	2.68	1.44	6.17	5.90	2.16	2.41	0.08	2.84	2.90	18.65	9.59	10.71	12.72	7.28	8.61	0.07	0.08	1.79	2.12	0.39	0.38	0.81	1.34
26	E4_Aa	NovelBoundary	0	2.48	4.46	3.29	0.00	0.00	3.91	0.00	0.00	11.45	5.15	0.00	4.43	0.00	5.45	8.37	40.85	19.22	23.12	32.37	0.00	7.70	1.94	2.51	5.92	5.80	6.57	0.00	0.00	0.00
27	ER4a	ExonRegion	1	69.08	191.36	163.22	103.83	77.44	123.06	39.42	39.55	43.95	185.09	225.53	174.32	41.57	172.88	32.08	170.06	95.52	175.24	387.55	73.65	215.72	56.93	205.23	76.57	154.36	85.74	65.87	138.78	119.45
28	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E4a_E5a	KnownJunction	1	66.30	114.11	163.24	65.79	65.73	113.07	13.96	26.77	51.89	104.90	118.44	156.80	48.59	160.06	35.08	177.86	95.64	148.98	299.20	54.00	216.19	48.18	159.22	89.66	113.47	90.12	65.00	134.57	120.47
30	I4_SR1	SilentIntronRegion	0	0.74	1.94	0.14	0.00	0.00	1.42	0.00	0.32	0.43	0.00	0.31	0.64	0.33	0.47	0.00	0.43	0.39	1.16	1.65	0.00	2.95	0.00	0.00	0.74	0.49	0.00	0.00	0.84	0.17
31	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.88	0.00	0.00	1.46	1.60	0.00	0.00	0.00	0.00	0.00	2.98	0.00	0.00	0.00	0.00	3.97	2.04	0.00	0.00	0.00	0.00	0.00	4.36	0.00
32	ER5a	ExonRegion	1	90.54	192.33	184.29	99.31	97.70	133.34	14.53	61.11	45.38	167.04	205.81	171.23	53.93	204.92	25.74	197.40	106.93	195.84	393.46	95.74	254.95	65.48	212.50	91.46	180.74	84.01	88.06	138.03	114.21
33	E5_Ab	KnownBoundary	1	60.87	222.60	183.92	176.44	109.64	139.96	19.05	49.22	36.66	159.78	260.00	180.33	52.19	182.86	43.25	259.87	125.89	224.75	566.02	83.53	266.77	68.99	253.73	87.09	227.31	91.02	107.00	151.15	108.45
34	ER5b	ExonRegion	1	67.02	176.12	175.39	115.24	110.17	137.57	39.15	66.21	39.05	213.46	250.05	221.49	58.16	182.37	39.42	185.89	125.33	202.35	335.39	59.75	208.84	59.99	229.42	68.98	153.46	104.79	97.60	164.56	163.28
35	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	4.09	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00
36	E5a_E6a	KnownJunction	1	64.71	113.53	163.97	104.61	113.33	135.21	32.38	71.41	47.78	147.64	238.75	156.80	42.29	149.22	24.91	172.81	114.37	161.31	291.33	39.28	195.10	17.94	139.03	79.43	133.58	72.83	127.37	126.89	167.31
37	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.14	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	0.00	2.45	0.00	0.00	0.00	0.00	0.00
38	E5a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	7.79	4.24	0.00	0.00	0.86	0.00	0.00	0.00	0.00	0.00	0.00	3.21	0.00	1.87	0.00	1.93	0.00	0.00	3.95	0.00
39	E6_Aa	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	5.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	2.01	0.00	2.51	0.00	0.00	0.00	0.00	0.00	0.00
40	ER6a	ExonRegion	1	72.48	138.38	168.31	108.78	152.66	134.35	20.89	63.50	47.04	153.49	234.39	168.94	49.84	150.70	37.05	178.60	99.99	195.33	308.27	77.88	259.13	39.38	176.06	80.33	178.90	95.18	114.32	137.59	140.55
41	E6_Da	NovelBoundary	0	0.00	15.12	0.00	0.00	0.00	10.82	2.46	0.00	3.81	6.79	3.23	7.11	0.00	6.51	0.00	24.10	12.67	5.39	16.18	3.80	11.83	0.00	4.68	3.05	1.63	0.00	0.00	2.29	0.00
42	E6a_E7a	KnownJunction	1	66.77	162.97	152.83	163.71	115.39	124.23	31.70	61.66	37.12	128.43	257.38	158.31	51.75	140.74	51.42	166.08	83.42	145.38	379.90	66.49	200.55	57.17	190.50	69.74	155.63	84.88	94.92	133.81	114.59
43	E6a_E8a	NovelJunction	0	0.00	4.85	1.20	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	1.14	0.00	1.06	0.00	0.00	0.00	9.25	0.00	0.00	0.00	0.00	2.36	0.00	0.00	0.00	1.84	0.00	0.00
44	I6	Intron	0	1.64	7.30	0.51	3.29	0.37	7.58	1.08	1.41	2.75	2.43	1.64	2.03	0.74	1.83	2.19	9.10	2.74	5.68	18.10	4.74	6.44	0.69	0.28	1.48	1.97	0.36	0.14	0.37	1.89
45	I6_AR1	ActiveIntronRegion	0	1.65	7.32	0.51	3.30	0.38	7.60	1.08	1.41	2.75	2.44	1.65	2.04	0.75	1.84	2.19	9.12	2.75	5.70	18.16	4.75	6.46	0.69	0.28	1.49	1.98	0.36	0.14	0.38	1.90
46	E7_Aa	NovelBoundary	0	2.77	7.85	2.47	0.00	7.22	1.88	0.00	3.98	6.03	1.72	6.45	10.18	0.00	3.15	8.37	14.38	2.81	18.49	16.18	11.25	3.17	9.04	4.88	2.93	3.52	1.97	9.34	0.00	3.43
47	ER7a	ExonRegion	1	56.99	162.99	160.80	113.01	99.33	133.70	33.99	47.56	41.80	184.93	248.62	169.61	55.43	132.17	44.36	152.49	100.82	179.08	332.20	71.25	252.59	34.97	173.41	74.60	142.61	79.75	92.59	128.29	131.49
48	E7a_E8a	KnownJunction	1	39.87	255.17	105.27	150.12	158.13	164.67	27.92	53.65	56.00	200.73	352.69	213.07	78.75	170.65	48.24	197.14	101.81	201.89	712.14	103.13	305.92	57.85	181.88	120.17	190.45	67.72	180.25	118.21	140.01
49	ER8a	ExonRegion	1	49.75	187.97	143.56	156.60	100.07	151.63	38.40	37.23	51.68	174.94	287.18	175.47	53.60	142.15	47.50	141.29	104.13	152.94	401.80	80.78	292.05	39.06	148.07	92.24	128.97	66.06	94.94	115.47	123.78
50	E8_Da	NovelBoundary	0	0.00	4.75	0.00	0.00	12.97	5.52	0.00	0.00	0.00	7.91	0.00	0.00	0.00	0.93	0.00	3.82	2.25	28.51	16.18	0.00	9.15	4.96	0.00	2.51	3.86	0.00	0.00	0.00	1.35
51	E8a_E9a	KnownJunction	1	34.03	209.70	154.80	222.38	224.45	178.75	39.71	32.35	45.10	220.14	350.80	173.16	57.16	124.01	16.54	157.59	115.99	178.39	687.86	71.78	393.96	37.82	120.07	76.98	117.14	73.43	140.35	169.44	187.95
52	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	Ix	Intron	0	2.86	17.83	1.45	7.24	4.23	6.54	8.00	2.12	3.22	5.00	2.66	2.83	0.05	2.54	6.80	7.70	8.35	6.30	40.67	8.45	10.39	0.33	0.26	2.64	3.09	0.68	0.79	1.82	1.47
54	Ix_SR2	SilentIntronRegion	0	1.50	7.36	0.04	0.00	0.00	1.64	3.13	1.08	3.56	1.76	6.51	0.00	0.00	1.06	1.22	3.61	1.84	4.05	30.54	6.07	15.82	0.00	0.00	0.00	0.16	0.00	1.01	1.16	0.00
55	Ix_AR2	ActiveIntronRegion	0	2.19	25.56	0.87	4.70	5.12	5.40	9.08	1.45	1.48	5.29	1.66	3.24	0.00	1.84	8.88	9.24	11.13	6.97	56.00	12.79	14.78	0.47	0.24	0.28	1.84	0.41	1.21	1.24	1.84
56	Ix_SR1	SilentIntronRegion	0	3.43	16.40	1.91	9.43	4.47	7.86	8.41	2.63	4.10	5.45	2.86	3.07	0.07	3.13	6.78	7.82	8.19	6.55	37.08	7.23	8.48	0.31	0.31	4.06	4.09	0.90	0.63	2.24	1.53
57	E9_Aa	NovelBoundary	0	10.03	8.92	8.40	8.84	0.00	17.96	5.84	1.94	2.77	9.23	6.80	4.19	3.06	4.34	0.00	22.80	14.59	13.87	24.28	3.47	7.62	2.43	0.00	5.26	9.40	0.00	0.00	9.53	1.68
58	ER9a	ExonRegion	0	29.56	212.36	36.36	111.52	104.07	132.25	67.61	31.73	140.40	117.55	161.24	146.42	54.18	89.83	168.21	159.43	94.15	128.56	489.32	86.66	251.83	21.84	83.80	137.43	91.64	35.12	92.90	72.47	125.36
59	Ix_SR2	SilentIntronRegion	0	0.65	0.57	0.40	0.00	0.59	0.52	0.00	0.56	0.00	0.41	0.72	0.02	0.00	0.85	0.00	0.82	0.15	2.22	0.00	0.00	3.76	0.00	1.10	0.26	0.54	0.00	1.02	0.00	0.81
60	Ix_AR1	ActiveIntronRegion	0	0.10	0.90	0.32	0.00	0.00	0.64	0.00	0.60	0.00	1.84	2.00	0.33	0.00	0.79	0.00	1.16	0.16	2.43	0.00	0.00	2.76	0.00	0.68	0.20	0.65	0.00	2.98	0.00	0.25
61	Ix_SR2	SilentIntronRegion	0	1.59	3.64	1.01	0.00	0.99	0.28	0.00	1.07	0.25	0.86	0.00	0.62	0.13	1.39	0.00	1.92	1.57	9.91	1.60	0.00	2.90	0.00	0.62	0.43	1.81	0.48	0.18	0.66	0.00
62	Ix_AR1	ActiveIntronRegion	0	2.56	5.13	0.00	0.00	1.52	0.43	0.00	0.86	1.36	1.82	0.19	0.38	0.00	1.43	2.56	3.36	1.76	8.81	0.50	0.00	1.08	0.28	0.73	0.67	1.17	0.24	0.28	0.51	1.25
63	Ix_AR1	ActiveIntronRegion	0	3.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.20	0.00	0.00	2.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	I9_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.53	0.00
66	Ix_SR2	SilentIntronRegion	0	0.00	0.00	0.00	7.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
70	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
71	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00