Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C6orf150	Gene	0	59.27	178.99	48.64	33.43	97.05	111.66	68.27	24.65	84.62	63.75	60.73	18.00	36.81	31.32	88.93	53.09	29.99	66.52	125.87	31.30	195.33	48.79	32.56	60.60	42.72	32.47	68.21	8.36	87.19
2	296913	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	370315	Transcript	0	46.53	252.48	39.48	30.01	97.35	121.51	77.40	25.30	116.54	61.65	53.16	17.84	39.81	30.48	136.26	60.46	28.43	65.23	172.15	35.40	220.84	40.15	27.98	65.72	38.61	30.12	73.23	9.72	87.57
4	370318	Transcript	0	0.32	0.65	0.09	0.00	1.23	1.56	0.71	0.46	1.30	0.36	0.18	0.31	0.00	0.00	0.46	0.13	0.08	0.50	0.48	0.14	0.58	0.00	0.00	1.51	0.22	0.08	0.18	0.08	0.40
5	393269	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	459924	Transcript	0	4.67	14.37	1.28	0.00	3.63	9.10	2.02	0.22	11.14	6.62	4.31	1.87	2.87	1.43	7.55	3.73	6.08	4.53	9.71	1.21	17.54	1.13	1.31	3.53	1.42	0.44	2.99	0.36	4.06
7	IG29_AR1	ActiveIntergenicRegion	0	0.00	1.43	1.27	0.00	0.00	0.52	0.30	0.00	0.00	0.00	0.00	0.00	0.00	0.65	7.61	6.35	6.56	0.72	0.00	1.43	5.22	0.00	0.00	1.79	0.00	3.88	0.00	1.17	0.76
8	ER1a	ExonRegion	0	52.75	11.50	14.46	18.28	35.15	23.98	9.85	12.99	9.55	7.78	4.56	1.44	13.78	4.59	2.49	15.47	5.29	33.51	21.87	4.37	59.04	54.68	13.16	6.57	5.40	14.67	6.51	1.09	22.22
9	ER1b	ExonRegion	0	117.18	22.99	48.62	51.19	76.38	51.32	20.83	38.66	20.60	14.44	7.14	4.54	32.48	10.88	9.33	53.15	12.02	75.51	46.77	10.31	124.10	138.81	27.73	15.78	10.01	28.81	18.93	1.63	61.29
10	ER1c	ExonRegion	0	89.37	52.85	70.49	28.14	85.14	62.57	54.75	28.17	29.06	39.20	22.54	10.91	25.60	27.86	41.04	53.27	26.50	73.23	41.21	24.53	108.52	81.50	37.25	34.06	29.51	37.79	22.01	7.34	68.93
11	E1_Da	NovelBoundary	0	8.91	4.85	1.40	10.57	0.00	7.21	5.44	2.24	5.69	5.11	1.23	3.28	0.00	0.00	0.00	10.10	17.89	22.99	0.00	12.32	11.03	0.00	0.00	0.00	3.86	1.67	0.00	0.00	3.24
12	E1a_E2a	KnownJunction	0	87.48	157.06	104.37	29.33	203.37	147.48	59.50	51.36	53.99	83.61	54.35	30.90	43.28	51.98	33.69	64.79	45.99	61.77	137.57	40.19	206.61	71.52	35.56	57.96	72.59	33.39	101.13	6.25	107.95
13	E1a_E3a	NovelJunction	0	0.00	0.00	2.09	0.00	0.00	3.68	2.57	0.00	0.00	5.15	0.00	1.30	1.40	1.97	0.00	0.00	0.00	4.62	0.00	4.13	7.26	0.00	1.87	0.00	1.93	0.00	0.00	0.00	0.00
14	I1	Intron	0	3.21	4.91	0.64	0.23	1.24	3.37	1.48	0.47	5.16	2.39	1.25	0.29	0.91	0.97	5.91	1.23	3.23	3.53	4.48	0.26	6.45	0.92	0.35	1.85	0.87	0.55	0.53	0.05	2.36
15	I1_SR1	SilentIntronRegion	0	3.21	4.92	0.64	0.23	1.25	3.38	1.48	0.47	5.17	2.40	1.25	0.29	0.91	0.97	5.92	1.23	3.24	3.53	4.48	0.26	6.46	0.92	0.35	1.85	0.87	0.55	0.53	0.05	2.37
16	E2_Aa	NovelBoundary	0	0.00	8.34	0.00	0.00	0.00	3.76	0.00	0.00	7.92	0.00	2.53	0.00	0.00	0.00	0.00	3.06	2.63	0.00	8.09	0.00	1.80	0.00	2.51	2.87	0.00	0.00	0.00	0.00	0.00
17	ER2a	ExonRegion	0	128.98	300.86	128.38	58.39	164.94	173.36	95.09	37.17	80.48	136.01	106.64	32.37	66.31	59.63	79.83	109.83	59.71	112.42	200.79	56.39	314.67	103.39	57.63	103.08	82.88	59.77	104.19	11.07	167.84
18	E2_Ab	KnownBoundary	0	114.25	396.92	136.46	48.32	124.38	193.91	154.54	45.09	129.88	184.03	126.29	37.14	74.71	71.99	136.73	147.57	58.07	153.86	258.96	76.66	364.12	101.90	64.96	113.17	83.61	49.57	68.33	14.29	205.94
19	ER2b	ExonRegion	0	102.90	321.63	85.72	57.99	184.79	243.99	143.71	34.58	147.73	134.84	136.27	42.73	83.76	71.73	104.34	111.58	49.64	119.56	203.86	63.03	396.14	81.19	69.74	122.31	89.01	55.53	144.49	15.74	178.23
20	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.89	0.00	0.00	2.12	0.00	0.00	0.00	3.53	3.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E2a_E3a	KnownJunction	0	104.82	425.32	78.88	49.39	177.29	223.38	141.03	47.87	198.73	189.10	123.06	46.66	72.80	69.08	214.67	142.98	75.45	145.25	339.66	35.89	342.30	70.40	52.75	89.54	83.39	55.40	186.37	21.88	241.79
22	E2a_E4a	NovelJunction	0	2.48	12.60	2.62	0.00	0.00	3.61	2.46	0.00	1.55	1.96	0.00	0.00	1.66	0.97	0.00	3.29	1.04	9.25	0.00	4.13	10.51	0.00	0.00	0.00	0.00	0.00	7.40	0.00	0.00
23	I2	Intron	0	4.15	6.68	2.10	0.00	3.98	4.85	2.53	3.00	9.42	3.97	2.46	1.03	3.05	1.04	8.55	1.89	6.03	4.67	3.25	0.75	12.34	2.88	1.60	3.28	2.23	2.35	3.54	0.88	4.99
24	I2_SR1	SilentIntronRegion	0	4.15	6.69	2.10	0.00	3.98	4.86	2.53	3.00	9.43	3.97	2.47	1.03	3.05	1.05	8.56	1.89	6.04	4.68	3.26	0.75	12.36	2.88	1.60	3.29	2.23	2.35	3.55	0.89	5.00
25	E3_Aa	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	1.96	2.35	0.00	11.82	0.00	0.00	1.33	3.34	0.00	0.00	11.09	4.97	0.00	0.00	0.00	13.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.89
26	ER3a	ExonRegion	0	159.49	328.10	99.10	97.69	217.40	210.06	134.69	69.81	170.39	162.65	157.32	48.73	80.62	74.33	163.10	98.97	63.74	146.02	231.10	60.83	364.53	119.52	74.79	156.70	132.20	78.30	156.99	15.61	199.76
27	E3_Da	KnownBoundary	0	17.11	19.87	0.00	0.00	29.47	17.84	2.17	0.00	4.84	10.99	1.30	1.54	6.62	1.97	0.00	7.65	8.58	9.25	8.09	0.00	15.24	2.24	2.46	0.00	0.00	2.19	0.00	0.00	5.58
28	E3a_E4a	KnownJunction	0	104.11	320.81	123.90	92.53	259.67	218.81	115.80	35.43	125.59	142.81	134.73	51.72	68.59	69.39	147.50	87.74	79.82	209.85	298.75	63.10	308.13	111.92	65.11	166.83	150.33	98.53	195.16	13.79	196.79
29	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	3.91	0.00	0.00	0.00	0.00	0.00	1.14	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	0.00	2.48	3.94	0.00	0.00	0.00	0.00	0.00	0.00
30	ER3b	ExonRegion	0	4.67	14.37	1.28	0.00	3.63	9.10	2.02	0.22	11.14	6.62	4.31	1.87	2.87	1.43	7.55	3.73	6.08	4.53	9.71	1.21	17.54	1.13	1.31	3.53	1.42	0.44	2.99	0.36	4.06
31	E3_Db	NovelBoundary	0	8.08	13.09	0.00	0.00	14.15	5.14	2.35	0.00	14.65	9.51	7.21	1.27	4.94	1.20	15.75	3.06	7.50	9.25	24.28	0.00	16.08	0.00	2.27	2.51	3.45	0.00	11.83	0.00	2.05
32	I3	Intron	0	2.47	5.78	0.46	0.18	0.86	4.55	0.81	0.69	4.46	2.32	1.37	0.23	0.83	0.69	3.35	1.96	1.61	2.10	4.89	0.60	6.52	0.27	0.59	1.35	0.90	0.43	0.74	0.12	1.18
33	I3_SR1	SilentIntronRegion	0	2.48	5.78	0.46	0.18	0.86	4.56	0.81	0.69	4.47	2.32	1.38	0.23	0.83	0.69	3.35	1.96	1.61	2.11	4.90	0.60	6.52	0.27	0.59	1.35	0.90	0.43	0.74	0.12	1.18
34	E4_Aa	NovelBoundary	0	0.00	9.70	0.92	0.00	0.00	6.25	0.00	0.00	6.18	3.87	3.61	0.00	0.00	0.00	7.57	6.88	0.99	9.25	0.00	0.00	8.54	0.00	0.00	2.45	0.00	0.00	2.53	0.00	1.68
35	ER4a	ExonRegion	0	89.88	313.69	106.04	73.06	205.89	264.12	124.15	37.89	145.82	146.70	200.20	53.21	74.60	69.93	148.55	101.16	72.61	151.19	252.83	73.05	424.62	73.95	80.00	112.65	108.55	70.69	152.28	17.95	193.55
36	E4_Da	NovelBoundary	0	5.01	0.00	1.37	0.00	0.00	3.72	0.00	0.00	5.88	0.00	8.41	0.00	0.00	0.00	0.00	6.43	6.39	23.12	0.00	0.00	14.04	0.00	0.00	7.78	1.74	0.00	0.00	0.00	1.42
37	E4a_E5a	KnownJunction	0	85.12	322.07	81.62	88.65	310.36	315.23	138.17	44.59	202.75	200.33	291.39	40.30	72.16	88.96	184.17	115.59	71.04	126.25	267.05	114.79	539.40	65.10	107.86	126.69	130.48	75.74	227.91	15.77	206.53
38	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E4a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	I4	Intron	0	1.95	3.38	0.64	0.34	0.70	2.24	0.39	0.18	1.77	2.15	1.25	0.71	0.96	0.50	2.86	1.55	1.00	2.63	3.98	0.26	3.62	0.52	0.00	1.86	0.82	0.68	1.67	0.16	1.22
41	I4_SR1	SilentIntronRegion	0	1.96	3.38	0.64	0.34	0.70	2.24	0.39	0.18	1.78	2.15	1.26	0.71	0.97	0.50	2.87	1.55	1.00	2.64	3.99	0.26	3.63	0.52	0.00	1.86	0.82	0.68	1.67	0.16	1.22
42	E5_Aa	NovelBoundary	0	11.56	0.00	0.00	7.98	0.00	7.44	0.00	0.00	4.42	3.44	0.00	0.00	0.00	0.00	0.00	0.00	4.59	0.00	16.18	0.00	20.22	2.04	0.00	0.00	1.67	5.02	0.00	0.00	3.00
43	ER5a	ExonRegion	0	116.04	416.55	81.93	91.13	332.42	406.11	192.08	51.02	169.33	214.23	281.19	45.38	72.17	93.50	172.11	87.55	66.83	179.02	323.60	76.86	607.01	77.07	84.29	201.96	153.57	67.61	292.27	22.60	208.40
44	E5_Ab	KnownBoundary	0	140.33	523.05	90.79	109.79	410.13	462.52	199.51	69.42	203.94	219.10	251.46	44.40	86.65	81.25	211.68	90.50	69.44	187.89	388.44	85.26	659.37	97.92	78.70	259.30	146.39	65.10	303.06	21.48	198.15
45	ER5b	ExonRegion	0	131.81	468.07	130.61	132.32	382.55	431.47	170.51	51.55	211.03	215.81	235.43	43.55	91.55	74.94	163.22	105.89	84.54	147.03	332.25	75.71	640.36	99.67	82.15	175.20	113.92	65.19	252.72	12.24	194.00
46	E5_Da	KnownBoundary	0	66.18	298.80	137.16	132.65	249.79	308.40	128.39	22.59	152.75	142.57	202.94	45.72	77.00	57.30	149.89	85.30	83.64	168.50	298.97	63.43	483.89	56.40	61.27	110.42	80.70	52.01	230.55	20.80	181.97
47	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.87	0.00	0.00	0.00	0.00	0.00
48	ER5c	ExonRegion	0	86.21	345.08	86.55	65.97	148.23	222.52	124.30	35.25	167.60	126.72	153.81	31.56	75.59	55.04	142.43	74.59	66.08	108.06	263.55	54.96	423.47	61.89	59.60	121.79	79.58	61.14	168.96	15.39	191.22
49	E5_Dc	KnownBoundary	0	91.78	501.23	108.18	58.88	193.06	235.35	157.97	22.39	283.09	163.94	134.16	32.35	108.30	54.79	217.86	103.73	91.12	80.91	267.05	89.65	510.04	54.69	75.35	128.60	92.86	71.62	158.44	17.34	329.84
50	ER5d	ExonRegion	0	86.81	423.75	99.02	43.88	174.98	219.95	155.46	29.46	234.25	144.38	148.17	32.62	95.48	53.63	157.52	94.27	72.50	86.99	201.97	73.43	457.16	51.15	69.62	102.45	97.19	77.01	182.24	14.67	269.94
51	ER5e	ExonRegion	0	90.03	435.25	104.91	43.88	174.35	229.57	153.20	34.98	249.42	142.93	141.03	33.40	97.43	54.88	168.02	94.90	73.63	75.05	214.98	74.48	475.70	56.79	70.52	111.86	95.77	78.58	191.40	15.49	285.88
52	ER5f	ExonRegion	0	46.53	252.48	39.48	30.01	97.35	121.51	77.40	25.30	116.54	61.65	53.16	17.84	39.81	30.48	136.26	60.46	28.43	65.23	172.15	35.40	220.84	40.15	27.98	65.72	38.61	30.12	73.23	9.72	87.57
53	E5_Dd	NovelBoundary	0	2.54	0.00	0.00	0.00	5.45	7.90	7.15	0.00	12.46	11.78	0.00	1.54	3.09	0.00	17.54	16.60	6.37	10.02	16.18	0.00	35.58	0.00	3.79	5.14	0.00	0.00	0.00	0.00	1.91
54	I5	Intron	0	1.59	8.39	0.96	1.23	2.10	4.05	2.42	0.53	5.05	2.89	1.23	0.53	0.57	1.19	1.92	2.24	1.75	2.29	4.66	0.47	4.00	0.77	0.52	3.94	1.80	1.03	2.20	0.00	0.67
55	I5_AR1	ActiveIntronRegion	0	5.23	13.90	2.36	1.84	4.39	8.13	5.44	1.18	8.64	7.05	2.60	0.95	1.00	2.09	2.96	5.06	3.45	3.71	7.80	0.71	7.51	1.85	0.70	8.57	4.59	1.21	5.65	0.00	0.77
56	Ix	Intron	0	1.33	1.00	0.00	0.00	0.00	0.44	0.63	0.00	1.91	1.80	0.37	0.57	0.00	0.00	0.00	2.31	0.46	4.19	0.99	0.00	2.66	0.00	0.00	0.00	0.00	0.00	0.57	0.51	0.00
57	Ix_SR1	SilentIntronRegion	0	1.34	1.01	0.00	0.00	0.00	0.44	0.63	0.00	1.92	1.81	0.37	0.58	0.00	0.00	0.00	2.33	0.47	4.22	1.00	0.00	2.68	0.00	0.00	0.00	0.00	0.00	0.57	0.51	0.00
58	Ix_AR1	ActiveIntronRegion	0	0.33	0.50	0.26	1.10	0.00	1.89	3.11	0.00	0.60	0.22	0.00	0.19	0.00	0.35	0.00	3.99	0.35	9.79	0.00	0.42	1.77	0.00	0.00	4.25	0.22	0.24	1.13	0.25	0.43
59	Ix	Intron	0	0.47	2.11	0.18	0.00	0.53	0.15	0.22	0.00	2.44	0.47	0.26	0.00	0.00	0.00	1.60	0.27	0.65	1.05	0.00	0.00	1.71	0.00	0.59	0.23	0.00	0.51	0.00	0.89	0.00
60	Ix_SR1	SilentIntronRegion	0	0.47	2.11	0.18	0.00	0.53	0.15	0.22	0.00	2.45	0.47	0.26	0.00	0.00	0.00	1.61	0.27	0.65	1.05	0.00	0.00	1.72	0.00	0.59	0.24	0.00	0.52	0.00	0.89	0.00
61	E6_Aa	NovelBoundary	0	0.00	7.17	0.00	0.00	0.00	0.00	27.41	0.00	4.26	0.00	0.00	0.00	1.24	0.00	0.00	9.10	1.40	18.49	16.18	0.00	4.09	0.00	9.11	0.00	0.00	0.00	0.00	4.40	0.00
62	ER6a	ExonRegion	0	0.65	1.30	0.18	0.00	2.46	1.29	1.42	0.92	2.59	0.73	0.36	0.63	0.00	0.00	0.93	0.25	0.15	1.00	0.96	0.28	1.15	0.01	0.00	0.14	0.43	0.16	0.37	0.16	0.80