Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP3-475N16.1	Gene	0	14.49	25.89	35.92	14.00	12.47	21.07	16.05	34.71	24.59	40.67	30.22	44.08	38.11	32.83	36.41	34.19	66.83	26.07	20.40	15.12	27.32	13.00	13.04	49.29	16.86	47.93	32.47	29.51	49.80
2	450671	Transcript	0	8.23	16.52	21.56	9.62	7.11	11.53	11.66	19.48	15.21	23.25	19.69	27.37	21.60	20.25	24.93	21.77	41.20	17.71	12.91	10.05	16.07	7.16	7.79	28.47	10.37	27.80	19.76	17.59	28.34
3	ER1a	ExonRegion	0	15.74	27.64	43.77	9.03	17.40	30.19	13.18	45.38	26.95	52.37	30.22	51.35	50.04	38.60	29.55	34.84	73.70	25.75	18.10	16.45	35.29	16.21	15.14	61.75	20.97	52.67	33.68	29.67	58.72
4	E1_Da	NovelBoundary	0	19.58	32.38	75.37	29.33	18.86	50.99	29.41	76.04	38.16	33.00	76.21	104.37	106.93	61.37	50.03	67.09	146.69	23.12	15.96	27.62	59.04	27.66	32.06	69.21	27.77	129.60	92.14	79.30	100.26
5	E1a_E2a	KnownJunction	0	0.00	0.00	3.79	0.00	0.00	0.00	8.30	2.39	0.00	1.60	1.61	2.59	1.97	1.13	0.00	0.00	3.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05
6	Ix	Intron	0	17.12	18.52	21.58	6.61	6.00	17.32	6.19	41.86	18.44	33.71	23.77	31.26	41.03	27.95	31.31	28.11	63.75	27.23	24.54	14.29	21.03	9.97	12.78	42.96	15.37	54.08	23.07	27.54	41.75
7	Ix_SR1	SilentIntronRegion	0	17.33	18.75	21.83	6.69	6.08	17.53	6.27	42.37	18.65	34.12	24.06	31.64	41.52	28.30	31.69	28.46	64.52	27.52	24.84	14.46	21.29	10.09	12.92	43.47	15.56	54.74	23.35	27.88	42.22
8	E2_Aa	NovelBoundary	1	17.22	34.22	84.46	9.27	13.41	22.60	7.95	39.17	30.00	33.00	39.51	50.99	45.03	52.56	67.37	27.16	92.76	28.51	32.37	17.28	29.76	6.71	16.74	102.46	12.99	58.53	33.60	40.66	47.21
9	ER2a	ExonRegion	0	16.03	26.20	47.79	18.63	6.38	24.54	15.18	44.84	32.83	50.70	46.94	61.58	52.90	43.63	56.79	45.31	116.80	35.64	30.82	17.04	28.51	10.70	18.96	62.60	18.61	90.34	56.14	45.97	87.04
10	E2_Da	NovelBoundary	1	11.86	23.56	69.21	0.00	18.42	39.06	11.44	38.72	49.64	81.41	68.74	97.83	103.56	69.90	89.10	36.87	140.03	75.52	31.92	28.37	42.84	14.05	22.36	84.28	45.65	118.23	40.21	76.74	168.70
11	E2a_E3a	KnownJunction	0	0.00	13.38	6.15	0.00	0.00	1.96	4.98	2.19	7.86	1.88	4.46	8.73	0.00	10.70	23.72	14.46	17.40	4.62	8.09	3.47	5.37	0.00	2.02	8.31	2.99	6.44	0.00	5.75	0.00
12	E2a_E4a	NovelJunction	0	5.43	13.38	5.21	0.00	0.00	0.00	5.84	2.19	4.35	1.72	1.61	3.01	0.00	4.19	15.75	6.88	11.93	0.00	0.00	0.00	1.89	0.00	2.51	11.13	0.00	0.00	0.00	5.66	0.00
13	Ix	Intron	1	7.84	22.98	39.59	7.71	15.76	28.39	8.24	27.73	38.38	46.91	53.54	49.89	59.68	34.66	63.28	21.14	77.74	27.29	24.06	20.85	39.60	11.64	18.29	71.75	28.30	76.77	52.81	42.11	85.38
14	Ix_SR1	SilentIntronRegion	0	7.87	23.08	39.75	7.75	15.83	28.51	8.28	27.85	38.55	47.11	53.77	50.10	59.93	34.81	63.55	21.23	78.06	27.41	24.16	20.94	39.75	11.69	18.37	72.04	28.41	77.10	53.02	42.28	85.73
15	E3_Aa	NovelBoundary	0	11.80	15.90	60.32	0.00	7.37	39.90	12.30	40.31	51.31	42.58	47.26	37.86	64.29	53.73	18.14	6.27	78.04	9.25	16.18	27.04	24.63	9.53	9.26	65.26	31.33	37.08	78.37	41.11	32.58
16	ER3a	ExonRegion	0	14.50	24.26	30.35	12.97	18.80	15.52	10.27	25.31	18.55	41.71	37.77	47.28	38.82	32.53	37.62	25.40	32.45	26.49	17.38	15.56	29.83	12.02	14.67	43.14	17.48	33.55	38.55	24.08	42.89
17	E3_Da	NovelBoundary	0	16.99	54.78	57.15	31.92	7.07	46.62	8.35	59.32	45.62	70.14	62.48	79.94	69.77	67.29	60.00	17.06	62.91	33.91	48.33	18.19	44.40	31.16	33.54	56.05	35.57	45.92	54.52	25.07	71.41
18	E3a_E4a	KnownJunction	0	0.00	0.00	1.54	9.27	0.00	0.00	5.26	0.00	2.77	0.00	6.45	4.04	0.00	0.00	0.00	3.82	11.88	13.87	0.00	6.62	0.00	0.00	0.00	0.00	3.41	0.00	4.37	0.00	0.00
19	Ix	Intron	0	14.18	23.69	51.31	9.82	18.95	26.35	8.28	31.30	59.32	48.10	31.78	32.78	57.94	33.31	62.67	36.42	30.32	18.32	31.35	19.10	31.57	20.16	14.24	45.41	19.41	45.01	38.24	32.55	77.67
20	Ix_SR1	SilentIntronRegion	0	14.18	23.69	51.31	9.82	18.95	26.35	8.28	31.30	59.32	48.10	31.78	32.78	57.94	33.31	62.67	36.42	30.32	18.32	31.35	19.10	31.57	20.16	14.24	45.41	19.41	45.01	38.24	32.55	77.67
21	I3	Intron	0	5.30	6.57	6.68	4.09	2.79	5.23	2.30	2.45	8.10	11.54	3.17	7.40	3.70	3.45	10.66	7.89	8.24	2.93	10.34	2.10	3.80	0.69	0.69	8.60	2.18	2.69	2.79	3.10	3.95
22	I3_AR1	ActiveIntronRegion	0	6.27	0.00	3.58	0.00	1.92	2.70	1.78	1.27	4.11	2.72	2.65	4.95	0.25	1.57	8.19	1.85	3.89	0.63	14.62	0.00	5.65	0.00	0.00	2.15	0.00	2.54	0.00	1.82	1.19
23	I3_SR1	SilentIntronRegion	0	5.20	7.28	7.02	4.53	2.88	5.50	2.36	2.58	8.53	12.49	3.23	7.67	4.07	3.65	10.92	8.54	8.71	3.18	9.87	2.32	3.60	0.76	0.76	9.29	2.41	2.71	3.09	3.24	4.25
24	E4_Aa	NovelBoundary	0	0.00	0.00	4.81	0.00	0.00	0.00	2.86	8.81	4.26	21.17	0.00	19.67	2.87	8.40	0.00	10.17	25.77	0.00	0.00	7.19	3.69	2.48	0.00	7.78	6.14	1.80	0.00	6.20	4.29
25	ER4a	ExonRegion	0	11.35	24.15	17.53	17.42	7.20	8.49	24.42	16.28	17.52	14.49	10.39	16.03	7.49	15.12	26.81	28.55	32.88	17.57	16.01	11.23	13.51	11.17	3.72	23.48	9.10	11.58	5.56	17.66	7.70
26	IG23_SR1	SilentIntergenicRegion	0	1.85	7.76	3.13	2.07	1.06	4.55	2.32	5.30	11.11	8.32	4.12	5.55	2.84	3.98	8.81	4.85	12.05	2.98	5.98	2.81	4.42	0.52	0.91	4.03	2.27	3.40	2.90	5.99	4.34
27	IG23_AR1	ActiveIntergenicRegion	0	2.48	4.88	1.67	1.02	0.00	2.36	2.07	1.05	2.24	4.95	2.38	2.29	0.46	2.65	0.66	2.13	3.41	1.38	1.37	1.18	3.66	1.03	0.00	3.10	0.61	2.69	0.28	1.16	1.72