Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	HCG27	Gene	0	57.59	17.05	12.52	54.90	1.38	17.48	22.55	28.45	28.54	18.80	1.55	18.67	7.53	26.23	90.72	15.18	35.31	52.43	34.93	29.46	20.19	7.80	4.91	27.41	5.86	7.47	6.21	46.93	34.85
2	383331	Transcript	0	32.21	10.03	9.92	45.26	0.00	10.13	12.65	17.62	16.36	15.96	2.05	11.14	6.50	15.44	45.30	11.39	22.14	30.14	20.93	18.99	15.44	8.96	5.04	14.25	4.34	6.06	7.80	25.78	35.32
3	424675	Transcript	0	1.09	0.00	1.02	45.09	0.00	0.00	2.79	0.00	0.00	0.00	0.00	0.56	0.00	0.00	8.02	0.00	3.46	1.12	0.00	0.00	0.00	0.00	1.40	0.00	0.00	3.20	0.00	8.21	4.26
4	415276	Transcript	0	2.78	0.00	0.00	0.00	0.00	0.12	2.30	0.11	0.21	0.00	0.00	1.04	0.00	0.91	0.20	1.11	0.10	13.31	1.88	0.10	0.00	0.00	1.37	4.44	0.00	0.00	0.00	6.22	0.03
5	IG26	Intergenic	0	5.35	1.82	3.51	7.92	0.27	2.78	3.86	7.64	5.53	8.39	1.03	2.48	1.30	2.84	6.38	4.49	7.83	7.34	4.37	6.07	1.94	3.79	1.48	3.65	1.16	1.55	1.74	7.33	5.67
6	IG26_SR1	SilentIntergenicRegion	0	1.20	3.69	1.76	0.00	0.00	2.65	1.30	13.16	4.24	5.66	0.64	4.61	0.25	0.05	0.88	0.47	1.43	4.47	1.83	0.53	0.27	0.34	0.07	0.82	0.00	0.30	0.35	21.45	0.00
7	IG26_AR1	ActiveIntergenicRegion	0	8.32	4.99	1.62	0.00	0.00	6.55	5.63	16.06	12.04	12.02	3.10	5.24	0.92	1.31	1.90	3.52	6.36	5.69	3.30	5.85	1.10	1.40	1.12	4.72	0.55	0.00	0.00	18.12	0.35
8	IG26_SR2	SilentIntergenicRegion	0	1.25	2.26	4.50	0.84	0.00	4.82	4.24	5.81	6.03	7.26	1.25	2.52	1.06	1.69	0.00	2.53	3.49	6.65	1.49	5.39	0.50	0.42	0.21	1.26	0.00	0.00	0.00	6.30	0.16
9	IG26_AR2	ActiveIntergenicRegion	0	3.61	0.44	3.14	1.26	0.00	3.48	5.14	8.78	4.81	6.46	0.79	3.41	1.51	0.09	0.87	0.78	3.83	4.64	0.84	5.39	0.52	2.05	0.00	3.84	0.41	0.60	0.00	10.43	0.16
10	IG26_AR3	ActiveIntergenicRegion	0	31.77	5.73	18.59	59.46	2.15	8.01	16.36	24.04	20.59	33.63	3.68	8.00	6.97	20.09	40.01	28.97	43.86	40.48	28.19	28.99	12.33	26.72	11.01	19.55	7.31	11.09	12.93	16.83	44.01
11	ER1a	ExonRegion	0	25.63	5.34	15.85	79.90	0.00	5.10	12.46	16.81	10.46	25.14	3.95	5.08	7.48	7.93	22.86	11.34	16.71	32.86	17.22	23.19	16.56	17.90	9.03	6.28	6.00	11.15	16.71	11.46	59.12
12	E1_Da	NovelBoundary	0	15.10	7.47	46.02	143.00	0.00	10.09	50.12	38.02	12.97	20.49	3.16	8.46	8.34	14.27	18.34	64.56	37.52	23.12	0.00	41.60	15.08	14.20	11.97	10.83	4.62	7.38	15.46	24.35	21.95
13	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	I1	Intron	0	1.77	0.66	0.69	7.40	0.00	0.28	1.25	1.14	0.23	1.49	0.74	0.00	0.00	0.37	3.22	0.00	1.85	7.36	0.00	3.43	0.59	1.12	1.49	0.89	0.89	0.65	0.76	5.39	5.94
15	I1_AR1	ActiveIntronRegion	0	1.42	1.07	0.88	6.41	0.00	0.46	1.87	1.22	0.37	2.17	1.17	0.00	0.00	0.60	3.31	0.00	2.24	9.98	0.00	5.00	0.94	1.55	0.93	1.42	0.22	1.04	1.21	5.00	6.13
16	I1_SR1	SilentIntronRegion	0	2.57	0.00	0.54	11.36	0.00	0.00	0.31	0.96	0.00	0.53	0.00	0.00	0.00	0.00	4.31	0.00	1.48	4.32	0.00	1.12	0.00	0.58	3.12	0.00	2.84	0.00	0.00	7.95	7.04
17	I1_AR2	ActiveIntronRegion	0	1.98	0.00	0.00	3.94	0.00	0.00	0.00	1.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.58	0.00	0.00	0.00	0.00	0.00	0.90	0.00	0.00	0.00	0.00	1.63	2.58
18	E2_Aa	NovelBoundary	0	24.54	4.56	10.74	21.57	14.74	5.68	13.10	2.34	5.51	17.98	6.04	12.50	9.62	19.17	0.00	18.44	16.05	4.62	8.09	27.79	9.75	14.29	17.39	10.29	10.95	15.28	7.55	30.96	41.93
19	ER2a	ExonRegion	0	0.00	0.00	0.64	27.42	0.00	0.00	0.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.04	0.00	1.39	2.23	0.00	0.00	0.00	0.00	0.58	0.00	0.00	2.07	0.00	4.11	2.38
20	E2_Da	NovelBoundary	0	42.00	18.42	20.48	119.92	6.63	5.60	22.08	14.68	35.81	44.78	1.33	23.31	13.37	5.87	43.85	3.82	33.67	10.79	48.55	11.00	15.24	2.48	2.46	2.57	3.83	31.33	2.53	57.69	67.55
21	E2a_E4a	KnownJunction	0	2.18	0.00	1.40	62.77	0.00	0.00	5.03	0.00	0.00	0.00	0.00	1.11	0.00	0.00	0.00	0.00	5.54	0.00	0.00	0.00	0.00	0.00	2.22	0.00	0.00	4.33	0.00	12.31	6.14
22	I2	Intron	0	46.07	11.14	13.76	51.28	2.15	18.72	23.70	26.52	18.65	18.32	0.87	12.63	3.27	19.86	42.70	10.61	28.16	66.91	19.41	25.54	21.52	5.65	4.78	11.91	4.34	6.54	1.62	29.55	16.72
23	I2_AR1	ActiveIntronRegion	0	23.76	4.08	3.34	11.10	1.08	10.36	12.96	15.92	16.65	15.69	0.53	5.73	3.30	5.02	24.84	7.00	13.24	37.02	16.29	8.75	14.55	4.80	4.01	5.25	1.90	9.06	2.44	39.40	29.24
24	I2_SR1	SilentIntronRegion	0	21.51	2.69	9.09	50.95	0.00	12.07	6.74	14.64	11.95	7.24	0.00	6.97	0.00	4.93	15.33	8.01	11.86	29.66	6.68	11.20	10.73	2.26	1.51	2.70	2.99	4.60	0.00	20.46	9.23
25	I2_AR2	ActiveIntronRegion	0	58.04	15.03	18.12	64.92	2.90	22.76	30.38	32.26	20.56	21.22	1.15	15.98	3.85	27.54	53.66	12.32	36.12	83.72	22.77	33.79	25.84	6.56	5.64	15.81	5.41	6.07	1.63	27.95	13.91
26	E3_Aa	NovelBoundary	0	79.04	9.31	11.24	90.59	0.00	31.19	28.78	53.60	19.49	11.38	0.00	11.66	1.97	27.16	49.63	3.06	34.06	114.56	24.28	15.30	35.42	7.10	2.51	11.84	7.08	12.70	0.00	22.42	36.68
27	ER3a	ExonRegion	0	3.08	0.00	0.00	0.00	0.00	0.23	2.26	0.22	0.41	0.00	0.00	0.66	0.00	0.80	0.41	2.22	0.20	17.37	3.75	0.21	0.00	0.00	0.57	3.20	0.00	0.00	0.00	4.13	0.07
28	E3_Da	NovelBoundary	0	49.67	13.28	21.30	48.53	0.00	31.00	22.83	43.84	59.90	7.19	0.00	20.51	2.93	27.74	94.68	12.55	53.12	74.62	32.37	39.20	14.84	15.75	4.24	17.77	5.61	2.19	1.99	30.01	18.03
29	E3a_E4a	KnownJunction	0	2.48	0.00	0.00	0.00	0.00	0.00	2.35	0.00	0.00	0.00	0.00	1.42	0.00	1.02	0.00	0.00	0.00	9.25	0.00	0.00	0.00	0.00	2.17	5.68	0.00	0.00	0.00	8.31	0.00
30	I3	Intron	0	45.14	6.73	11.93	47.39	0.00	12.44	19.72	32.14	22.60	11.56	0.21	17.63	4.73	16.69	71.07	12.90	37.94	58.63	17.79	20.39	7.70	5.96	3.15	10.48	4.48	4.38	3.51	44.35	23.88
31	I3_SR1	SilentIntronRegion	0	28.78	1.72	2.14	12.88	0.00	5.04	10.65	19.29	4.65	2.96	0.00	6.48	2.66	6.95	42.67	5.78	14.45	44.97	0.00	27.57	3.40	3.09	0.00	9.94	4.90	0.00	1.83	7.22	16.36
32	I3_AR1	ActiveIntronRegion	0	50.00	8.00	14.26	54.15	0.00	14.24	21.76	35.91	26.01	13.28	0.25	20.40	5.49	19.03	79.80	14.72	43.68	64.44	21.54	21.92	8.89	6.68	3.56	11.83	5.00	5.30	4.09	51.95	26.62
33	E4_Aa	NovelBoundary	0	50.49	28.70	16.67	43.14	7.22	7.17	13.62	24.19	30.12	8.03	0.00	16.93	1.46	19.03	93.28	11.02	36.85	27.74	8.09	15.30	9.79	2.04	0.00	5.02	1.93	3.82	4.77	33.56	20.53
34	I3_AR2	ActiveIntronRegion	0	16.27	0.00	0.00	16.25	0.00	3.05	9.41	9.82	7.57	3.64	0.00	2.84	0.00	4.47	19.08	3.19	7.94	20.82	0.00	2.91	1.11	2.00	1.94	0.00	0.00	0.00	0.00	8.94	6.71
35	ER4a	ExonRegion	0	56.60	10.46	10.78	58.98	3.16	11.13	22.73	26.69	24.08	14.89	0.53	14.29	4.20	18.20	85.39	9.09	29.69	55.42	27.45	24.13	10.51	5.99	3.46	21.44	5.56	8.20	3.56	43.80	24.86
36	E4_Da	KnownBoundary	0	49.31	4.07	5.33	36.67	0.00	4.53	12.07	26.57	27.83	7.23	2.72	9.85	0.00	15.64	84.31	3.52	17.56	28.51	16.18	28.86	9.51	6.66	1.92	17.59	3.79	8.54	0.00	29.48	9.38
37	ER4b	ExonRegion	0	54.57	22.91	15.57	41.69	2.25	22.81	25.89	25.24	28.15	20.33	1.50	13.14	4.78	28.23	99.92	14.21	26.30	53.98	42.96	44.87	25.24	6.36	4.37	35.57	5.01	7.30	8.69	28.08	22.22
38	E4_Db	KnownBoundary	0	64.47	38.88	5.46	70.32	0.00	37.06	46.92	22.59	46.87	33.87	7.34	22.86	5.64	30.84	84.91	10.33	38.31	72.31	56.65	47.30	48.97	4.96	4.63	51.74	9.36	6.39	2.53	47.49	45.76
39	ER4c	ExonRegion	0	70.98	24.76	13.92	55.87	0.00	25.28	25.49	36.04	38.63	22.75	2.20	28.35	12.03	38.38	113.06	22.84	49.72	57.55	45.57	33.77	29.77	8.97	6.10	36.48	7.01	7.02	6.69	65.88	46.85