Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NCR3	Gene	0	2.71	17.16	54.11	9.96	1.85	2.02	34.78	26.57	21.96	46.54	1.00	38.80	32.81	5.37	3.91	66.06	166.58	79.86	6.32	4.23	61.94	35.88	5.55	43.18	6.01	10.38	32.99	1.10	9.00
2	376072	Transcript	0	1.58	8.71	6.10	0.00	0.00	0.90	87.20	4.08	2.20	11.80	0.00	15.97	8.64	1.14	0.00	3.30	10.84	62.77	0.00	0.00	21.15	5.49	0.00	2.99	2.36	6.01	8.36	0.00	1.11
3	340027	Transcript	0	0.00	0.00	19.43	0.00	0.00	0.00	12.42	7.46	8.71	20.73	0.00	15.09	9.84	0.91	0.00	50.49	85.18	33.13	0.00	0.00	28.40	9.77	7.24	22.37	3.71	0.00	17.34	0.00	3.00
4	376073	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	491161	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	495600	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	478506	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	376071	Transcript	0	0.00	0.00	4.76	0.00	0.00	1.73	10.01	0.00	3.78	1.84	0.00	6.05	0.00	0.00	0.00	6.58	12.49	0.00	0.00	0.00	5.78	2.48	1.97	2.87	0.00	0.00	6.96	0.00	0.00
9	ER1a	ExonRegion	0	0.00	13.02	15.46	4.33	0.00	0.00	17.62	25.30	12.32	17.65	1.19	17.64	0.00	1.14	0.00	43.96	47.16	0.00	0.00	0.00	34.39	49.61	3.15	10.52	9.53	7.33	18.65	0.42	4.37
10	ER1b	ExonRegion	0	3.38	18.36	47.30	13.19	6.54	1.89	21.44	23.61	17.07	32.47	0.28	47.27	0.93	5.63	4.67	61.61	212.13	0.00	2.93	0.99	48.92	59.60	2.78	31.15	4.79	10.48	25.35	0.70	9.26
11	E1_Da	KnownBoundary	0	0.00	12.80	29.70	0.00	14.44	1.69	7.67	9.85	4.08	10.83	0.00	21.84	1.62	4.12	0.00	10.71	86.98	0.00	8.09	0.00	9.63	19.84	0.00	7.96	1.48	1.76	8.60	0.00	7.03
12	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1c	ExonRegion	0	6.43	11.10	21.97	0.00	7.31	1.56	7.93	22.87	17.30	19.96	0.53	23.64	2.02	2.66	0.87	27.16	71.79	0.00	0.60	0.56	32.93	52.12	1.61	22.99	8.00	2.90	16.65	0.00	10.44
14	ER1d	ExonRegion	0	9.80	23.78	13.14	0.00	0.00	6.42	27.26	73.38	41.62	49.43	2.38	38.81	4.08	5.31	0.00	110.03	117.92	6.11	4.31	5.62	108.27	148.51	2.41	49.37	14.36	17.44	14.48	0.00	14.38
15	ER1e	ExonRegion	0	8.47	34.02	13.87	13.23	0.00	9.23	58.60	62.95	41.89	81.74	3.60	66.70	4.95	8.23	9.73	157.39	214.94	8.45	22.63	6.36	123.25	114.69	8.78	57.42	18.65	30.24	33.19	1.90	14.28
16	E1_Ad	KnownBoundary	0	6.02	32.67	15.25	18.98	0.00	5.49	60.70	32.75	33.86	83.29	6.45	79.61	5.54	10.21	9.77	137.16	268.83	0.00	8.09	3.56	94.82	49.44	13.89	54.61	21.63	14.63	41.89	4.04	17.70
17	ER1f	ExonRegion	0	3.31	26.47	32.43	6.37	0.00	2.61	44.49	28.83	19.52	75.06	1.99	75.61	2.97	9.02	6.32	113.05	281.00	2.03	10.73	3.61	59.13	26.63	10.44	44.50	9.49	12.93	59.26	2.42	15.11
18	E1_Dc	NovelBoundary	0	0.00	0.00	1.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	3.82	32.59	0.00	0.00	0.00	1.97	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
19	E1c_E2a	KnownJunction	0	0.00	35.58	42.63	10.78	0.00	1.80	26.15	16.52	15.47	36.19	1.30	54.94	3.15	5.47	8.17	60.20	272.52	4.62	0.00	6.95	36.62	18.67	13.79	40.67	3.86	7.51	28.73	0.00	15.78
20	E1c_E2b	NovelJunction	0	0.00	0.00	1.00	0.00	0.00	0.00	13.33	1.94	0.00	2.04	0.00	1.42	0.00	0.00	0.00	0.00	26.72	0.00	0.00	0.00	0.00	4.96	0.00	2.87	0.00	0.00	0.00	0.00	0.00
21	I1_AR1	ActiveIntronRegion	0	0.00	1.33	0.69	0.00	0.00	0.28	0.83	0.00	0.00	1.79	0.00	0.76	0.00	0.19	0.00	4.47	6.78	0.00	0.00	0.00	1.77	0.00	0.37	2.66	0.00	0.00	0.38	0.00	0.28
22	E2_Aa	NovelBoundary	0	0.00	0.00	2.52	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	1.45	0.00	2.33	0.00	2.98	19.29	0.00	0.00	0.00	4.09	2.48	0.00	7.72	0.00	0.00	0.00	0.00	0.00
23	ER2a	ExonRegion	0	2.83	20.70	105.68	16.36	0.00	1.70	30.33	19.69	10.33	42.73	1.79	45.10	1.87	4.10	5.23	72.78	198.93	7.63	7.95	6.40	60.26	28.73	8.02	48.80	8.09	6.43	26.70	0.75	7.89
24	E2_Da	KnownBoundary	0	0.00	3.78	78.28	10.78	6.93	1.61	25.12	13.54	6.79	50.45	4.78	36.84	1.97	1.13	8.37	75.12	181.00	0.00	0.00	0.00	49.14	24.36	9.51	51.98	14.24	6.09	12.08	2.25	12.35
25	E2a_E2b	KnownJunction	0	0.00	0.00	4.76	0.00	0.00	1.73	10.01	0.00	3.78	1.84	0.00	6.05	0.00	0.00	0.00	6.58	12.49	0.00	0.00	0.00	5.78	2.48	1.97	2.87	0.00	0.00	6.96	0.00	0.00
26	ER2b	ExonRegion	0	0.00	19.10	60.90	7.41	0.00	0.74	29.71	20.86	8.90	40.08	1.22	38.44	3.47	3.59	4.86	90.34	213.08	5.42	4.94	3.03	64.98	34.92	10.92	52.19	6.66	9.78	61.86	2.45	6.99
27	E2_Ab	KnownBoundary	0	0.00	12.41	55.26	16.82	0.00	0.00	18.08	27.22	16.66	47.62	0.00	39.34	1.53	3.04	0.00	85.45	234.57	0.00	24.28	4.13	54.83	40.35	10.98	74.77	7.08	8.54	30.17	2.29	6.44
28	ER2c	ExonRegion	0	5.05	14.09	48.03	11.09	4.34	3.33	31.18	27.73	19.43	68.35	0.15	60.95	32.37	7.20	3.79	99.88	269.19	95.17	9.42	1.18	62.30	35.91	8.90	55.34	5.39	9.81	23.60	0.53	9.48
29	E2_Db	KnownBoundary	0	7.96	14.35	44.57	18.98	0.00	8.33	19.45	29.76	33.07	41.86	1.23	64.46	81.33	11.61	0.00	99.07	269.50	184.68	16.18	0.00	63.78	31.99	4.43	44.38	3.18	1.63	30.96	0.00	5.28
30	E2b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER2d	ExonRegion	0	5.14	22.22	58.57	20.21	7.61	2.25	101.01	30.13	28.07	70.04	0.93	62.86	125.60	12.96	5.70	77.12	214.37	374.74	2.47	4.91	73.96	41.30	3.88	41.38	6.08	8.20	30.07	0.89	14.74
32	E2c_E3a	KnownJunction	0	3.01	21.72	88.60	0.00	6.34	0.00	168.61	9.46	34.23	84.68	0.00	50.24	53.82	9.88	8.97	61.12	202.45	277.02	0.00	0.00	64.74	52.26	4.53	59.58	11.40	3.95	21.27	2.29	21.36
33	E3_Aa	NovelBoundary	0	0.00	0.00	1.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	4.62	0.00	0.00	1.93	0.00	0.00	2.93	0.00	0.00	0.00	0.00	0.00
34	ER3a	ExonRegion	0	0.58	27.37	111.52	20.04	2.86	2.97	63.46	44.42	28.55	71.69	1.37	52.76	49.55	7.00	6.07	82.81	251.78	134.34	12.03	5.13	96.37	45.99	6.93	83.18	6.31	15.66	49.38	2.48	10.41
35	E3a_E4a	KnownJunction	0	0.00	0.00	1.42	0.00	0.00	1.96	19.11	7.02	1.16	1.56	0.00	11.99	0.00	0.86	0.00	0.00	12.34	13.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	1.74	0.00	0.00
36	E3a_E5a	KnownJunction	0	0.00	19.39	101.90	39.90	0.00	7.83	8.47	84.50	33.01	108.45	1.61	36.02	114.96	5.65	0.00	113.37	312.63	195.47	0.00	8.27	125.30	41.18	4.97	67.95	5.30	27.72	124.14	4.49	12.97
37	E3a_E5b	KnownJunction	0	0.00	0.00	19.43	0.00	0.00	0.00	12.42	7.46	8.71	20.73	0.00	15.09	9.84	0.91	0.00	50.49	85.18	33.13	0.00	0.00	28.40	9.77	7.24	22.37	3.71	0.00	17.34	0.00	3.00
38	I3	Intron	0	0.00	0.00	0.00	0.00	0.00	0.51	0.00	0.00	0.00	0.54	0.00	0.00	0.00	0.50	0.00	1.85	1.11	4.30	0.00	0.00	1.59	0.00	0.00	0.80	0.00	0.00	1.36	0.00	0.00
39	I3_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.52	0.00	0.00	0.00	0.53	0.00	0.00	0.00	0.51	0.00	1.89	1.14	4.40	0.00	0.00	1.61	0.00	0.00	0.82	0.00	0.00	1.39	0.00	0.00
40	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	3.52	0.00	0.00	0.00	0.00	0.00	0.00	4.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER4a	ExonRegion	0	0.79	6.25	10.95	0.00	0.00	1.00	72.39	7.02	2.48	11.58	0.00	22.79	6.47	1.39	0.00	8.80	20.88	33.40	0.49	0.00	16.06	2.63	1.00	2.83	1.79	3.37	8.18	0.00	0.47
42	E4_Da	NovelBoundary	0	5.60	12.70	9.02	0.00	0.00	3.72	192.58	6.97	4.20	24.13	0.00	25.33	13.53	2.02	0.00	10.40	23.00	131.77	0.00	0.00	43.92	9.29	0.00	5.50	3.79	10.34	15.85	0.00	1.65
43	E4_Db	NovelBoundary	0	0.00	0.00	3.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.64	0.00	7.50	3.87	18.49	0.00	0.00	5.21	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00
44	ER4b	ExonRegion	0	1.58	8.71	6.10	0.00	0.00	0.90	87.20	4.08	2.20	11.80	0.00	15.97	8.64	1.14	0.00	3.30	10.84	62.77	0.00	0.00	21.15	5.49	0.00	2.99	2.36	6.01	8.36	0.00	1.11
45	E5_Aa	NovelBoundary	0	0.00	0.00	4.34	0.00	0.00	1.96	2.52	2.54	1.55	3.60	4.84	0.00	0.00	0.00	8.37	3.44	9.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	5.07	2.25	1.25
46	ER5a	ExonRegion	0	1.91	11.44	51.84	7.05	0.00	2.28	7.70	45.93	33.00	68.63	1.23	21.38	111.46	8.29	1.90	78.23	186.61	256.30	10.67	11.79	75.83	26.78	7.56	43.68	3.06	16.22	77.58	1.78	13.47
47	E5_Ab	KnownBoundary	0	0.00	9.21	21.93	0.00	0.00	0.00	5.84	30.90	39.92	60.92	1.61	13.83	103.65	7.49	9.57	62.65	110.50	249.41	8.09	6.78	46.49	18.28	7.44	43.55	0.00	13.69	22.81	0.00	9.47
48	ER5b	ExonRegion	0	1.95	11.48	47.09	7.81	0.89	1.00	9.52	20.70	34.00	40.71	0.53	19.15	61.31	4.51	3.19	42.58	106.26	123.51	4.61	5.68	62.05	19.83	3.78	44.22	3.41	10.03	27.74	0.89	8.34