Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LSM2	Gene	0	2511.12	278.44	312.01	1062.95	376.20	472.23	959.01	1996.01	493.98	376.99	293.98	434.42	550.53	246.60	651.16	276.41	356.22	192.11	945.69	503.11	329.16	969.33	389.23	300.19	591.76	267.81	237.31	246.34	309.55
2	375661	Transcript	0	85.29	7.95	9.45	116.23	29.89	15.41	33.42	39.05	18.04	15.43	5.89	18.81	15.38	3.44	17.69	24.77	10.28	11.20	10.72	14.79	10.51	38.90	38.64	0.79	16.70	8.35	5.30	14.33	10.88
3	477182	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.92	0.00	0.00	0.00	0.00	4.20	0.00	0.00	0.00	1.40	0.00	8.09	15.88	0.00	0.00	0.00	0.00	1.55	1.67	0.00	0.00	0.00
4	470086	Transcript	0	8.49	0.00	0.00	9.27	7.37	8.79	13.85	31.05	4.84	11.46	7.05	17.95	17.64	9.26	8.37	7.34	17.85	0.00	8.09	11.33	0.00	17.60	8.82	0.00	11.10	9.57	2.53	5.53	4.92
5	470083	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	493387	Transcript	0	0.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.31	0.00	0.45	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.00	0.54	0.00	0.00	0.00	0.00	0.00
7	491421	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	475835	Transcript	0	4.54	5.41	1.11	0.00	0.00	1.73	1.49	0.09	2.67	0.00	0.87	1.01	1.68	1.94	5.62	1.73	3.74	0.03	4.89	1.02	0.00	2.44	0.00	0.00	1.67	0.00	0.00	0.06	0.00
9	ER1a	ExonRegion	0	85.29	7.95	9.45	116.23	29.89	15.41	33.42	39.05	18.04	15.43	5.89	18.81	15.38	3.44	17.69	24.77	10.28	11.20	10.72	14.79	10.51	38.90	38.64	0.79	16.70	8.35	5.30	14.33	10.88
10	ER1b	ExonRegion	0	712.01	61.32	191.55	1633.74	332.76	154.90	262.95	235.46	83.99	139.18	69.84	160.55	162.96	45.79	185.02	148.58	189.75	79.58	156.97	177.76	96.03	329.92	231.62	41.53	144.65	103.27	78.69	153.72	84.54
11	E1_Ac	KnownBoundary	0	182.32	14.15	30.35	317.50	113.92	64.27	118.84	116.65	27.01	35.63	16.04	47.05	45.16	9.97	58.20	27.31	29.22	19.26	48.55	46.89	13.32	67.24	41.96	2.87	41.37	28.41	21.77	23.99	15.98
12	ER1c	ExonRegion	0	949.01	76.02	178.57	1515.18	635.93	215.47	559.17	668.89	99.51	179.89	76.47	155.00	235.34	68.52	248.19	198.77	100.52	79.22	368.27	135.72	137.18	426.32	219.52	70.56	160.09	156.40	90.79	138.88	131.03
13	E1_Ad	KnownBoundary	0	1581.81	121.19	259.89	2378.65	1009.79	322.10	970.25	1068.03	178.18	283.81	132.23	231.47	332.52	109.05	453.25	346.39	160.92	121.24	509.60	199.47	235.21	797.37	353.37	131.00	254.55	244.95	150.88	226.95	204.58
14	ER1d	ExonRegion	0	3395.16	249.97	644.99	2535.84	1248.84	560.38	1236.17	2199.85	330.37	386.21	192.09	386.15	591.93	211.24	600.62	454.59	348.21	175.15	862.68	527.14	436.61	1458.77	481.78	228.47	516.57	319.73	184.04	273.53	392.54
15	E1_Da	NovelBoundary	0	5.54	0.00	0.00	0.00	0.00	1.73	0.00	0.00	2.83	0.00	1.46	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.02	0.00	0.00	0.00
16	E1a_E3a	KnownJunction	0	2901.55	309.27	712.67	1441.69	740.98	553.49	992.10	1601.32	416.22	369.98	216.92	431.38	662.78	213.83	753.83	487.99	438.71	257.12	606.93	697.73	463.36	1063.70	378.09	285.14	587.98	243.37	202.82	261.73	437.13
17	E1a_E3b	NovelJunction	0	14.57	0.00	2.54	0.00	0.00	0.00	5.15	7.22	1.25	0.00	1.61	1.27	3.82	2.30	0.00	3.29	1.33	0.00	0.00	0.00	0.00	1.80	2.22	0.00	1.93	3.18	1.99	0.00	1.75
18	E1a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2_Aa	NovelBoundary	0	28.43	0.00	1.37	119.71	18.42	3.30	10.01	0.00	1.46	0.00	1.58	2.65	4.46	1.95	0.00	7.04	2.07	0.00	16.18	7.77	1.80	2.14	6.40	0.00	1.78	0.00	2.39	0.00	1.78
20	E2_Ab	NovelBoundary	0	2.65	0.00	1.10	9.49	0.00	1.76	2.57	4.73	1.28	3.52	0.00	3.52	0.00	3.21	0.00	3.21	3.42	0.00	0.00	0.00	0.00	2.09	2.22	0.00	3.64	1.93	0.00	2.02	0.00
21	ER2a	ExonRegion	0	1.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.62	0.00	0.91	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	1.08	0.00	0.00	0.00	0.00	0.00
22	ER2b	ExonRegion	0	6.69	0.00	0.26	6.16	0.00	0.00	3.25	0.00	0.00	0.71	0.00	4.45	0.48	2.58	0.00	0.00	3.99	2.92	5.72	1.28	1.45	0.13	0.00	1.89	2.58	0.00	5.49	0.06	0.05
23	E2_Ac	KnownBoundary	0	14.27	0.00	1.07	9.06	0.00	0.00	2.52	0.00	0.00	2.04	0.00	1.66	1.62	1.97	0.00	0.00	5.83	4.62	0.00	7.69	1.60	0.00	0.00	0.00	0.00	0.00	10.14	0.00	0.00
24	ER2c	ExonRegion	0	29.36	3.44	1.60	14.18	3.30	6.41	12.56	7.34	3.38	4.02	0.79	4.41	4.76	6.01	0.27	1.98	8.69	0.43	10.52	7.04	2.11	5.84	0.31	0.03	5.92	1.74	4.26	3.81	2.54
25	E2_Da	KnownBoundary	0	52.20	8.24	2.52	0.00	17.24	8.63	18.54	16.62	3.35	0.00	3.95	2.65	6.94	12.21	0.00	14.38	8.67	0.00	15.96	13.07	5.50	8.75	2.17	0.00	5.68	1.85	1.99	2.11	2.84
26	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER2d	ExonRegion	0	45.34	5.08	2.82	14.85	11.47	5.12	19.42	9.21	3.30	3.72	4.15	6.07	4.33	6.54	8.66	6.83	6.65	2.32	29.35	11.67	4.06	4.15	2.79	0.13	4.55	0.67	4.11	5.98	1.06
28	E2_Db	NovelBoundary	0	10.79	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	2.00	0.00	1.87	0.00	0.89	0.00	0.00	3.47	0.00	0.00	3.47	7.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E2b_E3a	KnownJunction	0	36.34	0.00	2.74	19.20	12.08	1.57	20.71	0.00	4.42	5.91	4.08	6.99	4.39	1.11	33.49	6.50	5.65	4.62	32.37	7.94	2.05	2.24	2.36	0.00	6.59	0.00	8.40	8.67	0.00
30	I2	Intron	0	8.29	0.96	0.99	8.53	0.73	3.47	0.60	1.09	3.17	2.36	0.35	2.47	0.29	0.94	4.38	0.74	2.89	0.57	3.80	1.64	0.85	1.07	0.00	0.64	0.85	1.87	1.36	0.73	0.00
31	I2_SR1	SilentIntronRegion	0	8.34	0.96	1.00	8.58	0.73	3.49	0.60	1.10	3.19	2.38	0.36	2.48	0.29	0.95	4.39	0.74	2.90	0.58	3.82	1.64	0.85	1.08	0.00	0.64	0.86	1.88	1.37	0.73	0.00
32	E3_Aa	NovelBoundary	0	0.00	0.00	1.54	10.35	0.00	9.63	0.00	0.00	0.00	0.00	2.34	3.04	0.00	1.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.62	0.00	0.00
33	E3_Ab	NovelBoundary	0	1649.70	308.50	396.30	582.80	295.77	464.90	870.87	1047.22	276.69	402.97	259.40	447.22	526.51	201.67	535.37	372.85	473.01	177.88	1155.87	516.95	322.53	490.65	504.22	231.67	630.26	247.23	300.47	262.31	312.90
34	ER3a	ExonRegion	0	2633.65	330.13	590.41	1115.18	588.73	563.43	1059.46	1554.29	380.46	447.44	283.95	504.26	674.01	248.90	680.22	489.35	518.03	252.94	911.95	699.47	446.13	915.87	519.96	299.69	700.70	280.68	277.48	300.74	420.95
35	ER3b	ExonRegion	0	2365.32	283.29	332.52	801.21	290.88	458.87	1398.40	2012.30	373.62	463.61	423.50	867.73	803.55	267.18	629.95	370.92	680.41	211.15	931.34	629.83	293.90	923.12	702.43	297.93	636.12	430.76	482.65	529.55	443.82
36	E3_Da	NovelBoundary	0	3.01	9.70	1.45	0.00	0.00	0.00	0.00	2.04	3.20	0.00	0.00	1.39	0.00	2.17	0.00	0.00	3.31	0.00	16.18	0.00	4.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E3a_E4a	KnownJunction	0	7.90	9.50	2.54	0.00	0.00	5.18	4.46	0.00	6.67	0.00	1.46	3.04	3.03	4.32	7.57	2.75	9.25	0.00	8.09	3.06	0.00	4.52	0.00	0.00	3.49	0.00	0.00	0.00	0.00
38	E3a_E6a	KnownJunction	0	2229.94	234.52	190.08	920.36	191.29	333.76	1470.48	1940.12	403.68	369.18	379.68	847.82	686.50	218.40	592.98	310.28	614.35	144.48	865.67	564.84	195.10	1016.10	658.37	246.26	424.05	488.96	541.01	657.84	436.14
39	E3a_E7a	KnownJunction	0	8.49	0.00	0.00	9.27	7.37	8.79	13.85	31.05	4.84	11.46	7.05	17.95	17.64	9.26	8.37	7.34	17.85	0.00	8.09	11.33	0.00	17.60	8.82	0.00	11.10	9.57	2.53	5.53	4.92
40	E3a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.92	0.00	0.00	0.00	0.00	4.20	0.00	0.00	0.00	1.40	0.00	8.09	15.88	0.00	0.00	0.00	0.00	1.55	1.67	0.00	0.00	0.00
41	I3	Intron	0	2.99	2.48	0.40	3.04	0.89	4.08	1.34	2.56	3.02	4.45	1.22	1.98	0.94	1.59	3.06	0.90	4.79	2.80	5.03	0.83	2.76	0.55	0.33	2.47	2.08	1.52	0.55	1.18	0.61
42	I3_SR1	SilentIntronRegion	0	2.99	2.48	0.41	3.04	0.89	4.08	1.34	2.56	3.02	4.46	1.23	1.98	0.94	1.59	3.06	0.90	4.79	2.80	5.03	0.83	2.76	0.55	0.33	2.48	2.08	1.52	0.55	1.18	0.61
43	ER4a	ExonRegion	0	3.63	6.57	0.78	0.00	0.00	0.00	0.00	0.28	1.34	0.00	1.14	0.00	1.95	1.50	4.09	2.43	1.96	0.10	3.13	0.00	0.00	2.70	0.00	0.00	1.43	0.00	0.00	0.19	0.00
44	E5_Aa	NovelBoundary	0	224.62	83.77	103.22	417.36	293.56	139.04	96.24	178.56	151.01	240.67	340.61	109.12	114.61	38.66	159.85	80.78	62.17	18.37	15.74	32.25	299.83	41.62	84.07	44.02	50.58	114.15	160.67	63.35	58.53
45	ER5a	ExonRegion	0	2.09	0.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.00	5.20	0.00	0.00	0.00	3.45	0.00	0.00	0.09	0.00	0.00	0.10	0.00	0.00	0.00	0.00
46	E5_Da	NovelBoundary	0	36.81	3.97	4.29	47.02	0.00	8.10	7.78	10.50	19.28	38.15	6.90	5.72	3.09	15.60	39.86	2.98	22.35	28.13	8.09	6.37	13.00	8.46	6.21	26.44	9.66	19.01	7.36	22.15	6.37
47	I5	Intron	0	4.14	2.92	1.85	3.29	0.90	4.80	2.50	2.45	5.52	4.91	0.98	0.71	1.61	1.79	2.28	1.30	6.72	2.35	7.05	1.48	3.67	1.66	0.83	2.87	1.97	1.44	1.18	2.02	1.41
48	I5_SR1	SilentIntronRegion	0	4.14	2.93	1.85	3.30	0.90	4.81	2.51	2.46	5.53	4.92	0.98	0.71	1.61	1.79	2.28	1.30	6.73	2.35	7.06	1.49	3.68	1.66	0.83	2.87	1.97	1.45	1.18	2.03	1.42
49	E6_Aa	NovelBoundary	0	8.67	4.56	0.00	0.00	0.00	2.99	0.00	2.54	6.30	8.71	0.00	0.00	1.50	3.28	0.00	6.73	9.43	0.00	8.09	6.70	0.00	2.04	0.00	3.05	0.00	0.00	2.34	2.02	5.05
50	E6_Da	NovelBoundary	0	10.74	4.17	1.52	0.00	0.00	0.00	2.92	7.42	0.00	6.11	0.00	1.78	1.46	1.13	0.00	6.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.57	1.78	0.00	0.00	0.00	0.00
51	E6a_E7a	KnownJunction	0	4006.94	331.28	114.98	870.53	188.19	614.38	1647.04	3764.29	649.61	552.97	509.76	848.93	811.59	340.81	963.11	404.14	659.27	269.19	1189.14	584.68	467.37	1629.21	670.63	442.22	995.81	486.52	344.25	472.32	494.67
52	ER6a	ExonRegion	0	3401.49	303.27	192.45	894.03	191.55	510.76	1631.91	3082.15	558.24	510.21	497.50	1064.32	921.34	336.98	685.44	335.36	812.82	215.87	970.72	614.09	352.55	1520.99	759.53	370.41	783.09	562.69	475.90	641.87	545.01
53	I6	Intron	0	1.71	0.00	0.00	0.00	1.95	0.55	0.80	3.67	2.69	2.30	0.00	1.48	0.00	0.72	3.68	2.97	5.95	0.77	2.55	2.20	1.14	1.44	0.00	1.71	1.14	0.63	0.00	0.65	0.53
54	I6_SR1	SilentIntronRegion	0	1.74	0.00	0.00	0.00	1.98	0.56	0.82	3.73	2.73	2.34	0.00	1.50	0.00	0.73	3.69	3.01	6.04	0.78	2.59	2.23	1.15	1.46	0.00	1.74	1.16	0.64	0.00	0.66	0.54
55	E7_Aa	NovelBoundary	0	13.33	0.00	7.47	0.00	0.00	8.29	9.38	15.63	9.35	3.36	5.85	1.54	3.12	4.81	0.00	3.75	15.53	13.87	0.00	3.47	17.81	0.00	0.00	2.99	1.93	2.19	0.00	0.00	0.00
56	ER7a	ExonRegion	0	6982.69	523.78	357.51	1073.99	353.27	1499.38	2874.66	6800.71	1394.06	1041.51	657.75	1077.88	1373.21	560.21	1402.30	743.06	841.65	497.75	2111.22	1016.01	1052.55	2779.22	1017.45	760.07	2004.00	860.94	417.86	634.25	872.34
57	E7_Da	NovelBoundary	0	11.09	0.00	1.42	0.00	0.00	7.25	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	4.25	0.00	16.18	0.00	4.01	0.00	0.00	0.00	5.00	0.00	1.94	2.02	0.00
58	E7a_E8a	KnownJunction	0	8555.01	660.04	569.73	1354.33	464.22	1443.81	2451.14	6946.97	1758.33	883.20	618.61	1039.23	1402.14	683.53	1632.23	804.15	713.68	549.30	2621.06	1403.24	989.20	3027.55	890.88	1022.19	1986.17	684.87	438.03	389.69	783.18
59	I7	Intron	0	11.24	0.00	1.59	0.00	0.00	1.31	2.88	2.63	1.07	3.44	0.57	0.00	0.00	0.00	0.00	0.00	1.42	3.83	3.05	0.95	4.76	0.00	0.00	2.05	0.68	0.00	0.87	0.00	0.00
60	I7_SR1	SilentIntronRegion	0	11.43	0.00	1.62	0.00	0.00	1.34	2.94	2.68	1.09	3.51	0.58	0.00	0.00	0.00	0.00	0.00	1.45	3.90	3.10	0.96	4.85	0.00	0.00	2.09	0.69	0.00	0.89	0.00	0.00
61	E8_Aa	NovelBoundary	0	8.32	0.00	1.42	0.00	0.00	8.06	4.81	2.09	3.17	0.00	0.00	0.00	0.00	0.00	9.97	0.00	3.56	0.00	0.00	4.13	4.53	4.81	0.00	2.93	3.26	0.00	0.00	0.00	0.00
62	ER8a	ExonRegion	0	3671.02	461.03	461.84	1304.25	469.52	673.89	1301.29	2905.30	804.82	545.12	462.95	592.59	798.50	395.15	1049.96	356.24	476.51	287.35	1543.51	779.46	467.16	1362.92	497.72	486.72	857.74	343.33	355.14	301.00	428.04