Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	PSMB8	Gene	0	1791.71	787.90	685.60	963.67	234.43	711.35	2223.26	2778.23	1280.23	777.87	647.45	780.16	1518.99	605.71	1095.03	592.76	876.42	482.14	559.45	926.19	341.73	2520.24	738.06	575.90	662.00	451.56	343.60	1019.83	489.75
2	374881	Transcript	0	1.05	0.00	2.27	6.90	3.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.71	0.00	0.40	0.00
3	484003	Transcript	0	181.37	45.62	42.41	52.38	8.74	56.60	79.10	140.32	72.99	52.63	27.69	41.04	27.21	65.47	96.76	113.42	189.70	45.14	43.52	59.82	32.70	62.11	14.19	56.07	43.64	14.83	14.26	57.86	17.90
4	374882	Transcript	0	227.97	58.54	49.49	152.78	75.26	47.72	146.72	98.37	49.60	50.02	29.97	20.67	77.71	18.82	56.21	61.64	28.58	50.29	35.88	37.44	26.64	288.89	71.94	41.18	36.81	29.58	13.54	63.16	48.94
5	395339	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	490613	Transcript	0	62.77	61.29	12.01	23.57	4.13	78.69	77.88	46.28	57.91	42.82	23.35	29.03	22.09	43.48	64.24	76.94	107.00	40.96	40.93	36.84	40.84	29.33	9.40	50.34	25.04	6.93	4.51	22.48	13.99
7	ER1a	ExonRegion	0	1.05	0.00	2.27	6.90	3.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.71	0.00	0.40	0.00
8	E1_Ab	KnownBoundary	0	68.54	16.29	3.86	7.98	7.22	3.07	20.25	19.46	15.26	23.41	11.51	12.59	0.00	21.71	7.57	29.61	51.12	5.01	0.00	20.51	6.62	54.69	2.41	49.53	4.47	7.17	0.00	11.64	1.32
9	ER1b	ExonRegion	0	67.18	16.59	57.09	84.02	29.23	37.18	76.97	54.37	28.25	38.00	39.73	23.98	35.31	24.46	51.47	38.91	64.99	18.90	29.22	62.67	11.61	62.00	30.24	21.39	25.90	26.79	20.53	43.53	22.11
10	E1_Da	NovelBoundary	0	13.51	0.00	1.12	0.00	0.00	3.80	2.92	9.65	10.02	6.95	0.00	3.07	1.46	16.64	0.00	10.86	19.97	0.00	0.00	19.02	1.52	4.33	2.31	18.90	3.30	0.00	1.84	5.44	2.61
11	E1a_E3a	KnownJunction	0	200.55	23.56	174.88	95.77	59.69	94.42	180.05	164.82	78.72	65.07	32.87	47.38	106.52	85.19	148.89	114.37	149.69	47.01	64.74	180.45	35.18	204.92	71.51	77.94	66.64	78.15	69.68	120.28	89.66
12	E2_Aa	NovelBoundary	0	13.33	0.00	2.17	0.00	0.00	1.76	4.92	0.00	6.40	0.00	1.17	0.00	0.00	4.61	34.88	7.04	3.76	0.00	0.00	7.61	0.00	0.00	0.00	0.00	0.00	2.19	0.00	11.14	0.00
13	E2_Ab	NovelBoundary	0	430.89	106.84	71.66	268.32	170.51	76.39	250.94	157.36	83.26	81.21	56.21	25.15	110.95	37.31	132.35	102.43	50.22	125.60	64.74	52.84	50.14	489.19	123.57	88.83	60.58	48.11	26.19	99.43	84.32
14	ER2a	ExonRegion	0	227.97	58.54	49.49	152.78	75.26	47.72	146.72	98.37	49.60	50.02	29.97	20.67	77.71	18.82	56.21	61.64	28.58	50.29	35.88	37.44	26.64	288.89	71.94	41.18	36.81	29.58	13.54	63.16	48.94
15	ER2b	ExonRegion	0	1845.53	469.95	946.08	2376.27	664.48	489.02	1839.36	1871.39	771.22	510.28	344.02	608.95	1446.26	360.16	768.07	579.58	685.91	470.80	308.08	677.47	234.38	2685.64	679.45	352.16	370.76	415.94	248.43	947.23	588.05
16	E2_Da	NovelBoundary	0	17.81	0.00	2.94	0.00	0.00	3.49	2.52	0.00	2.98	3.91	0.00	4.82	0.00	4.39	8.57	7.04	7.72	0.00	0.00	11.83	7.66	7.44	0.00	2.87	6.82	0.00	0.00	2.11	1.88
17	E2a_E3a	KnownJunction	0	3226.74	528.48	199.00	362.79	61.01	397.56	1273.54	2879.01	804.86	460.81	247.19	379.33	824.83	527.46	535.77	214.88	315.72	430.50	226.59	1179.46	217.80	4469.29	283.09	725.44	482.13	171.23	161.32	389.87	208.51
18	E2a_E4a	NovelJunction	0	2.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.25	0.00	0.00	1.23	0.00	2.68	0.00	0.00	1.87	0.00	0.00	0.00	0.00	6.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2	Intron	0	26.08	15.31	4.74	4.78	3.66	26.58	8.73	11.51	12.10	19.61	6.64	8.63	2.16	13.95	15.32	39.18	38.31	17.47	8.79	13.01	10.81	7.36	0.60	17.21	8.58	5.11	1.98	11.55	3.29
20	I2_AR1	ActiveIntronRegion	0	26.16	15.36	4.75	4.80	3.67	26.66	8.76	11.54	12.14	19.67	6.67	8.66	2.16	14.00	15.37	39.29	38.44	17.53	8.81	13.05	10.85	7.38	0.60	17.27	8.60	5.12	1.99	11.58	3.30
21	E3_Aa	NovelBoundary	0	28.49	27.92	16.42	9.92	7.37	35.03	2.57	10.80	5.69	13.22	8.79	13.37	12.26	18.83	0.00	43.68	44.41	27.74	0.00	12.32	24.63	0.00	0.00	24.70	12.20	2.19	12.62	8.36	7.06
22	ER3a	ExonRegion	0	3632.65	1200.79	581.29	655.67	171.22	1410.05	4682.38	5334.07	1899.46	1567.04	1258.86	1451.45	2911.92	1113.54	1991.13	1329.01	1515.76	1070.79	905.99	1922.58	717.67	4506.12	1625.34	948.10	1265.69	1035.35	659.70	2213.87	1052.17
23	E3_Da	KnownBoundary	0	134.49	42.85	26.63	0.00	7.37	46.08	54.81	71.26	47.29	40.74	22.94	28.79	7.90	51.34	85.91	74.28	123.60	42.38	8.09	55.49	16.08	29.85	4.58	42.11	24.09	0.00	0.00	62.86	11.55
24	E3a_E3b	KnownJunction	0	3023.12	1231.66	1118.06	1104.99	403.21	1351.80	3842.55	5080.20	2352.36	1526.56	1285.31	1548.16	2296.65	1124.51	2050.40	970.39	1758.56	934.46	914.00	1950.13	702.57	3824.58	1390.32	1057.54	1284.69	906.56	1336.02	2467.77	706.29
25	E3a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER3b	ExonRegion	0	181.37	45.62	42.41	52.38	8.74	56.60	79.10	140.32	72.99	52.63	27.69	41.04	27.21	65.47	96.76	113.42	189.70	45.14	43.52	59.82	32.70	62.11	14.19	56.07	43.64	14.83	14.26	57.86	17.90
27	E3_Ab	KnownBoundary	0	180.85	34.42	29.62	61.90	6.93	54.44	64.25	133.27	64.62	44.82	7.69	25.72	10.41	51.60	75.54	99.37	200.33	47.26	48.55	64.34	14.44	55.57	8.96	63.05	30.31	5.24	4.67	61.56	15.19
28	ER3c	ExonRegion	0	3372.37	1285.90	2569.16	2409.52	772.35	1301.01	4220.48	5988.57	1989.22	1557.25	1258.46	1604.24	2500.85	1253.48	1931.43	1089.65	1892.55	868.03	1020.13	1975.47	710.44	4398.73	1313.27	1088.33	1389.81	795.09	905.90	1963.79	746.41
29	E3_Ac	KnownBoundary	0	3120.09	1294.97	3466.49	4185.72	945.83	1291.07	4469.28	5250.50	1991.17	1393.66	887.60	1684.94	2647.00	1178.58	1960.71	1277.22	1935.71	923.67	987.06	1969.89	691.26	3904.31	1340.33	986.00	1042.41	745.50	574.55	1721.91	740.33
30	ER3d	ExonRegion	0	2996.80	1428.18	2628.96	3517.20	673.28	1434.59	4797.64	5249.49	1815.26	1275.92	985.35	1724.53	2800.17	1186.84	2050.11	1287.62	1818.05	981.10	1056.96	1959.40	702.59	4153.51	1401.82	961.12	1093.66	731.05	486.91	1628.49	756.61
31	E3_Db	NovelBoundary	0	55.33	3.49	8.22	21.57	0.00	10.05	5.84	12.29	11.39	9.79	3.07	10.42	1.97	21.27	0.00	32.13	30.34	5.39	0.00	3.89	7.82	7.00	2.41	19.74	8.90	0.00	0.00	12.90	0.00
32	E3b_E4a	KnownJunction	0	3210.81	1425.75	1858.75	3424.98	682.77	1579.25	5183.49	5123.55	1989.55	1371.77	1197.53	1678.91	2735.65	1228.47	2107.80	1234.92	1705.60	929.58	1003.47	1808.13	753.39	4381.93	1350.62	1066.27	1207.40	859.74	617.89	1648.81	773.64
33	E3b_E6a	NovelJunction	0	0.00	9.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	I3	Intron	0	50.64	14.85	7.73	10.75	2.44	36.09	17.39	13.35	23.32	27.97	9.52	11.18	4.61	28.73	21.00	38.33	57.47	19.59	23.96	14.62	19.79	12.62	1.13	33.07	13.94	3.54	0.92	27.10	5.76
35	I3_AR1	ActiveIntronRegion	0	50.88	14.92	7.77	10.81	2.45	36.26	17.47	13.41	23.44	28.11	9.57	11.23	4.63	28.87	21.11	38.52	57.75	19.68	24.08	14.69	19.89	12.68	1.14	33.24	14.00	3.55	0.92	27.21	5.78
36	E4_Aa	NovelBoundary	0	42.41	41.98	6.45	9.92	0.00	26.05	12.64	9.36	27.62	23.01	0.00	17.29	0.00	25.66	15.95	30.52	39.37	18.37	16.18	7.36	11.39	15.56	0.00	27.99	3.60	3.60	0.00	31.54	3.20
37	ER4a	ExonRegion	0	4143.02	1831.06	1361.35	2978.16	549.66	1798.43	5751.65	6653.55	2579.99	1965.31	1696.03	2099.89	3537.68	1460.28	2456.90	1440.12	2131.37	1135.63	1376.86	2116.93	890.44	5612.18	1925.52	1258.72	1651.76	1126.56	802.32	2507.26	1038.50
38	E4_Da	NovelBoundary	0	52.38	14.54	6.63	0.00	0.00	24.52	48.17	47.97	44.22	14.82	4.14	16.69	6.91	42.23	25.11	49.19	80.25	41.61	16.18	15.38	29.08	20.03	0.00	35.35	5.38	2.19	2.53	15.01	1.52
39	E4a_E5b	KnownJunction	0	4291.84	2259.82	1311.00	1630.85	234.91	1963.19	6600.53	7302.35	3727.33	2390.94	2220.21	2239.09	3803.30	1409.40	2859.24	1636.31	2321.97	1155.10	1763.71	2265.87	902.88	5565.95	2100.55	1345.01	1917.52	1130.36	878.95	2876.74	1063.99
40	I4	Intron	0	46.38	11.88	3.45	11.08	10.06	29.74	35.31	25.61	21.66	17.11	5.52	7.96	4.68	21.46	20.82	30.32	34.60	15.88	27.98	18.68	8.08	9.29	0.00	35.46	11.04	2.43	2.83	16.79	6.21
41	I4_AR1	ActiveIntronRegion	0	47.33	12.12	3.49	11.31	10.27	30.33	36.03	26.08	22.11	17.46	5.63	8.12	4.78	21.89	21.25	30.92	35.32	16.12	28.55	19.04	8.25	9.48	0.00	36.15	11.26	2.48	2.89	17.14	6.34
42	E5_Aa	NovelBoundary	0	59.63	26.76	7.85	26.10	12.38	29.08	41.02	17.72	34.50	33.11	14.20	25.54	10.99	36.87	78.13	64.87	126.86	28.25	32.15	44.49	22.82	7.10	2.51	51.80	16.14	8.75	0.00	36.08	10.43
43	ER5a	ExonRegion	0	62.77	61.29	12.01	23.57	4.13	78.69	77.88	46.28	57.91	42.82	23.35	29.03	22.09	43.48	64.24	76.94	107.00	40.96	40.93	36.84	40.84	29.33	9.40	50.34	25.04	6.93	4.51	22.48	13.99
44	E5_Ab	KnownBoundary	1	62.64	45.47	8.75	0.00	0.00	62.19	63.05	25.53	39.80	39.43	16.01	15.57	3.18	43.65	52.02	84.68	88.78	37.12	40.46	9.76	15.00	13.22	0.00	46.72	27.43	5.06	0.00	8.04	9.31
45	ER5b	ExonRegion	0	4416.10	2450.51	1679.98	1671.30	391.30	1994.48	5781.70	7997.48	3387.07	2146.66	1945.81	2196.25	4107.75	1644.91	2753.30	1473.88	2334.32	1176.12	1672.14	2379.37	888.02	6515.48	1907.84	1604.41	1922.88	1128.29	972.08	2545.56	1232.11
46	E5_Da	NovelBoundary	0	15.63	13.09	6.53	0.00	0.00	3.53	8.12	10.85	3.72	5.19	1.27	5.57	0.00	14.65	15.95	9.03	38.38	0.00	0.00	3.72	2.05	8.95	0.00	10.83	1.55	7.68	0.00	1.98	3.30
47	E5a_E6a	KnownJunction	0	4308.42	2761.25	1504.49	1498.63	327.46	1460.27	4593.49	6575.86	3417.35	1916.87	1706.56	1877.07	3952.01	1539.60	3010.72	1273.47	2210.57	1285.71	2199.35	2506.53	644.89	5703.64	1587.51	1883.53	1982.23	1158.60	1070.48	2786.65	1123.61
48	I5	Intron	0	18.01	8.19	3.01	1.43	0.00	7.97	4.03	12.15	11.76	5.20	0.71	5.91	1.95	8.59	9.95	10.72	19.41	8.54	8.95	4.34	2.28	3.24	1.08	9.47	2.00	0.63	0.00	1.30	2.28
49	I5_SR1	SilentIntronRegion	0	1.69	0.00	0.00	0.00	0.00	0.00	0.00	2.90	0.00	0.00	0.00	0.00	0.00	0.00	3.76	0.00	0.00	1.52	5.12	3.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	I5_SR2	SilentIntronRegion	0	28.27	11.93	3.92	3.13	0.00	13.24	5.58	15.75	19.30	8.18	0.52	9.79	3.13	14.44	5.36	18.45	27.72	11.15	12.07	5.50	2.63	3.31	1.89	13.35	1.81	0.87	0.00	1.60	4.65
51	I5_AR1	ActiveIntronRegion	0	16.06	9.49	4.23	0.00	0.00	6.63	5.14	14.60	10.16	5.04	1.66	4.96	1.78	6.87	22.94	7.87	23.36	10.62	7.44	3.04	3.75	6.00	0.77	11.67	4.09	0.80	0.00	1.99	0.51
52	E6_Aa	NovelBoundary	0	24.89	12.89	1.32	0.00	0.00	17.96	2.92	11.20	14.43	9.03	1.55	10.63	1.72	21.56	7.97	7.19	34.89	0.00	24.28	8.27	9.02	4.96	1.87	30.92	0.00	0.00	0.00	4.45	3.96
53	ER6a	ExonRegion	0	4147.38	2548.97	1381.52	1251.55	302.77	1575.78	4332.37	6778.79	3000.88	1965.51	1899.37	1913.19	3935.53	1597.81	2576.07	1199.10	2176.82	1009.29	1664.83	2314.43	708.91	5752.94	1721.33	1783.94	1862.53	1142.28	1069.82	2719.69	1162.07
54	ER6b	ExonRegion	0	2475.54	1100.06	825.18	1014.01	246.13	837.28	2797.24	3588.76	2610.64	975.73	754.00	876.61	2140.09	825.21	1797.21	617.15	1022.06	609.16	740.12	1222.30	402.38	3912.98	891.22	878.28	830.59	570.40	401.52	1314.44	687.92