Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RING1	Gene	0	152.97	100.05	144.71	160.29	50.00	143.65	93.36	157.95	148.82	189.11	85.47	135.66	162.18	195.23	97.52	110.21	280.32	188.75	184.35	76.76	97.00	152.98	172.78	201.80	133.60	160.97	61.71	170.39	166.02
2	374656	Transcript	0	108.06	48.94	59.26	109.94	21.12	98.44	69.87	99.52	63.77	140.04	70.63	128.64	132.49	180.84	44.40	65.90	307.76	140.59	121.79	51.88	66.05	122.64	131.35	154.35	79.77	165.00	43.88	165.95	152.17
3	478431	Transcript	0	8.96	3.33	3.15	7.42	0.45	6.26	1.93	4.51	3.37	5.93	3.57	5.56	4.58	11.67	1.67	11.10	16.34	7.78	23.98	1.80	7.58	5.44	4.67	9.76	3.18	5.49	1.59	5.69	5.73
4	ER1a	ExonRegion	0	9.83	9.00	47.83	273.93	41.48	21.88	25.26	11.51	11.65	15.31	7.14	34.57	36.60	20.03	5.38	35.13	119.47	53.62	32.40	12.18	17.27	12.40	31.55	8.35	5.91	32.59	10.01	31.97	39.78
5	E1a_E2a	KnownJunction	0	18.52	4.07	21.90	9.27	0.00	12.43	21.17	14.08	13.40	10.43	9.11	26.29	14.17	22.91	7.18	19.81	63.84	18.49	8.09	13.73	12.71	28.49	13.94	13.52	6.44	14.85	1.84	38.28	4.36
6	E2_Aa	NovelBoundary	0	0.00	0.00	1.25	0.00	6.04	0.00	0.00	0.00	0.00	0.00	0.00	1.23	1.62	0.00	8.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	5.53	0.00
7	ER2a	ExonRegion	0	204.62	98.06	71.73	69.20	22.97	215.25	133.94	176.72	111.15	235.21	104.07	196.99	207.36	270.49	62.39	134.71	434.27	244.04	203.90	102.32	131.87	208.87	186.48	220.71	153.50	268.81	56.18	242.54	265.31
8	E2_Da	NovelBoundary	0	5.13	0.00	0.00	0.00	0.00	5.18	0.00	0.00	0.00	5.87	0.00	1.45	0.00	6.49	0.00	0.00	10.17	9.25	8.09	0.00	3.81	0.00	0.00	12.20	1.70	0.00	0.00	8.67	0.00
9	E2a_E3b	KnownJunction	1	199.25	84.64	95.60	87.36	20.04	144.19	99.10	195.78	118.89	299.23	162.19	256.71	271.82	409.92	102.65	73.97	613.45	246.20	242.77	79.31	102.36	240.80	293.43	374.80	153.25	343.74	107.50	351.00	299.23
10	I2	Intron	0	6.31	2.26	1.64	0.88	0.00	5.73	1.24	1.81	1.03	1.59	1.90	1.36	0.56	6.22	1.35	4.78	8.05	3.86	8.22	1.50	2.80	0.66	0.22	3.43	1.58	0.58	0.00	1.00	0.65
11	I2_AR1	ActiveIntronRegion	0	6.34	2.27	1.65	0.88	0.00	5.76	1.24	1.81	1.03	1.60	1.91	1.37	0.56	6.25	1.35	4.80	8.09	3.88	8.25	1.49	2.81	0.67	0.22	3.44	1.58	0.58	0.00	1.00	0.66
12	E3_Aa	NovelBoundary	0	14.69	0.00	1.54	9.92	0.00	29.24	2.80	0.00	3.26	5.59	2.85	1.48	1.62	15.35	0.00	21.19	26.67	15.41	0.00	0.00	10.79	0.00	0.00	16.15	3.86	1.89	0.00	0.00	0.00
13	ER3a	ExonRegion	0	8.96	3.33	3.15	7.42	0.45	6.26	1.93	4.51	3.37	5.93	3.57	5.56	4.58	11.67	1.67	11.10	16.34	7.78	23.98	1.80	7.58	5.44	4.67	9.76	3.18	5.49	1.59	5.69	5.73
14	E3_Ab	KnownBoundary	0	5.60	4.85	2.72	0.00	0.00	6.79	0.00	2.29	2.65	0.00	1.42	1.87	0.00	8.02	0.00	6.88	15.06	14.64	0.00	0.00	0.00	1.99	0.00	2.93	0.00	0.00	0.00	0.00	1.39
15	ER3b	ExonRegion	0	302.74	172.15	478.09	496.39	196.58	318.27	162.28	270.20	219.16	357.36	203.81	301.50	283.30	486.19	110.37	135.93	708.58	319.89	326.40	138.32	199.27	257.43	255.77	387.78	248.03	285.26	106.58	325.63	277.72
16	E3_Da	NovelBoundary	0	29.20	4.56	8.02	7.98	0.00	12.16	5.66	22.69	9.56	7.35	7.69	4.40	4.87	36.18	0.00	13.31	68.23	22.99	32.37	3.56	5.94	4.57	2.36	8.13	10.46	1.80	0.00	10.78	3.86
17	E3a_E4a	KnownJunction	0	148.58	134.57	136.98	196.28	82.09	165.63	114.32	206.88	169.47	280.58	140.68	245.96	225.27	343.16	91.89	44.83	575.99	186.22	210.18	73.19	132.93	101.37	247.43	249.97	168.21	252.94	86.42	246.81	248.49
18	I3	Intron	0	20.50	3.49	0.00	2.86	0.00	9.86	1.61	10.27	1.34	5.18	3.32	2.95	0.77	15.69	9.89	5.65	19.63	8.44	20.37	4.08	3.41	2.15	0.72	5.14	3.42	3.13	0.00	3.25	1.07
19	I3_AR1	ActiveIntronRegion	0	20.81	3.52	0.00	2.90	0.00	10.00	1.63	10.43	1.36	5.26	3.36	2.99	0.78	15.94	10.05	5.74	19.93	8.58	20.69	4.15	3.46	2.19	0.73	5.22	3.47	3.18	0.00	3.30	1.09
20	E4_Aa	NovelBoundary	0	31.91	4.65	6.78	0.00	0.00	10.24	2.46	12.84	2.86	7.83	0.00	1.20	4.65	23.29	16.74	17.52	69.94	9.25	56.65	0.00	1.68	0.00	2.31	16.09	7.73	0.00	0.00	4.18	3.96
21	ER4a	ExonRegion	0	202.40	164.98	165.63	170.49	44.03	235.20	135.57	208.95	184.69	314.64	162.10	253.07	231.60	331.82	133.35	126.89	520.58	313.03	300.05	98.27	148.01	157.55	262.77	274.56	224.13	251.39	78.63	284.80	234.51
22	E4_Da	NovelBoundary	0	17.16	0.00	7.03	0.00	0.00	3.68	0.00	2.44	2.47	9.47	3.10	2.71	0.00	16.79	17.94	20.73	25.26	32.36	32.15	8.27	8.14	2.33	0.00	12.86	7.35	0.00	0.00	3.86	5.25
23	E4a_E5a	KnownJunction	1	143.33	141.45	400.26	236.61	44.65	182.17	88.85	172.69	130.37	230.33	98.73	230.45	194.76	223.18	150.88	98.15	567.48	266.62	169.27	63.18	90.57	122.90	200.10	181.42	142.15	191.01	78.92	291.25	246.58
24	I4	Intron	0	18.54	1.25	3.89	1.85	0.63	7.27	3.90	6.89	2.46	8.22	1.38	2.55	0.59	10.70	9.13	7.65	17.35	18.78	17.74	5.94	6.26	2.33	2.34	8.33	4.80	2.44	0.71	7.79	1.73
25	I4_AR1	ActiveIntronRegion	0	21.75	1.77	6.42	1.97	0.00	6.78	7.74	10.10	4.31	8.71	1.63	3.38	0.89	15.63	7.05	9.14	23.73	24.91	19.27	6.04	9.00	3.46	1.48	9.44	5.49	1.29	1.00	8.05	0.92
26	I4_SR1	SilentIntronRegion	0	15.84	0.79	1.65	1.77	1.20	7.78	0.50	4.08	0.83	7.85	1.17	1.82	0.32	6.36	11.09	6.38	11.77	13.43	16.53	5.91	3.87	1.33	3.13	7.41	4.23	3.48	0.45	7.63	2.48
27	E5_Aa	NovelBoundary	0	6.02	4.07	6.58	0.00	0.00	16.77	0.00	0.00	6.46	11.10	8.00	6.93	0.00	14.27	33.49	18.13	21.36	9.25	8.09	8.27	4.09	2.38	4.92	5.80	3.11	1.72	15.21	2.07	0.00
28	ER5a	ExonRegion	0	77.42	51.18	90.39	78.73	22.46	54.37	34.92	77.12	58.01	96.73	28.40	50.23	61.32	65.71	71.00	50.49	106.12	124.03	116.21	39.76	46.21	70.45	105.07	108.35	73.00	76.04	22.90	86.99	70.94
29	E5_Da	NovelBoundary	0	22.06	0.00	0.00	8.84	0.00	10.36	0.00	31.40	1.19	5.03	3.07	4.37	0.00	14.27	27.51	7.65	14.65	0.00	16.18	3.72	7.02	2.48	0.00	18.00	3.75	2.15	0.00	11.10	1.65
30	E5a_E6a	KnownJunction	0	130.71	92.30	68.86	61.47	25.94	77.62	44.51	99.23	115.32	131.10	29.70	35.30	89.39	96.49	74.55	45.13	61.97	117.77	80.70	60.04	73.88	147.07	71.07	185.13	88.20	84.50	40.50	72.70	37.97
31	I5	Intron	0	28.99	5.21	1.41	0.00	1.38	10.85	5.11	26.46	5.69	10.98	0.67	4.35	0.91	13.38	20.17	21.20	24.82	15.38	12.60	10.44	5.22	5.59	1.02	14.55	4.43	3.10	0.00	6.89	8.30
32	I5_AR1	ActiveIntronRegion	0	29.31	5.27	1.43	0.00	1.39	10.97	5.16	26.75	5.75	11.11	0.68	4.40	0.92	13.52	20.40	21.43	25.09	15.55	12.74	10.55	5.28	5.65	1.03	14.71	4.48	3.13	0.00	6.95	8.39
33	E6_Aa	NovelBoundary	1	14.33	9.31	4.14	21.57	0.00	9.36	0.00	26.23	2.71	7.35	4.46	3.40	3.41	11.72	27.11	22.64	28.68	22.99	8.09	0.00	9.91	8.95	2.51	29.79	8.52	6.31	0.00	15.23	2.81
34	ER6a	ExonRegion	0	143.53	81.60	120.38	124.90	43.45	103.52	89.72	161.31	144.37	186.48	63.15	102.55	166.83	147.13	119.10	135.59	194.45	189.15	155.60	77.04	67.03	158.51	199.50	179.13	114.26	146.67	55.90	152.59	180.79
35	E6_Da	NovelBoundary	0	2.77	0.00	1.47	0.00	0.00	3.76	0.00	2.54	7.25	0.00	1.33	2.86	0.00	1.33	16.94	6.58	17.13	5.39	8.09	0.00	4.01	0.00	0.00	5.62	1.52	0.00	0.00	1.75	0.00
36	E6a_E7a	KnownJunction	0	267.79	149.11	183.17	206.42	87.39	173.57	73.75	289.44	300.66	270.15	88.26	150.42	240.90	183.99	218.45	186.66	246.97	281.26	161.62	103.70	78.42	234.24	234.48	246.98	160.67	193.20	41.40	125.27	242.15
37	I6	Intron	0	5.80	0.00	0.00	0.00	0.00	0.62	1.82	3.32	1.01	0.65	0.00	1.12	0.59	1.43	8.72	1.93	4.04	1.74	0.00	1.24	1.29	0.00	0.82	1.94	0.00	0.71	0.00	0.74	0.00
38	I6_SR1	SilentIntronRegion	0	5.91	0.00	0.00	0.00	0.00	0.63	1.83	3.38	1.03	0.66	0.00	1.14	0.60	1.45	8.88	1.96	4.12	1.77	0.00	1.27	1.31	0.00	0.83	1.98	0.00	0.72	0.00	0.75	0.00
39	E7_Aa	NovelBoundary	0	22.59	0.00	4.53	9.71	0.00	12.78	0.00	5.08	5.09	7.55	4.18	4.43	5.22	5.30	18.14	14.08	18.21	13.87	0.00	6.70	1.68	0.00	0.00	2.75	3.26	4.38	0.00	0.00	1.45
40	ER7a	ExonRegion	0	203.59	144.67	153.97	139.35	46.84	180.91	127.40	231.63	273.69	223.89	103.33	149.87	225.55	232.84	143.78	164.78	261.31	193.89	225.79	102.84	129.56	238.50	212.66	287.67	171.87	190.71	105.05	193.54	204.92
41	IG9_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.48	0.00	1.24	0.00	0.91	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	10.99	0.00	0.00