Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C6orf1	Gene	0	180.73	43.29	45.26	78.41	34.86	39.98	96.03	62.01	70.84	34.86	19.61	39.74	40.40	56.31	123.50	106.55	184.05	38.82	46.20	151.68	29.57	132.20	25.94	61.52	57.66	66.78	25.39	69.78	60.47
2	476320	Transcript	0	3.93	0.90	1.62	1.71	1.22	0.45	1.62	0.50	1.03	0.23	0.10	0.37	0.72	0.67	1.35	1.66	1.23	0.39	1.42	4.30	0.79	1.24	0.84	1.69	2.43	1.23	1.05	0.75	2.53
3	335352	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	495581	Transcript	0	39.89	3.81	4.57	1.47	0.37	4.65	5.90	6.63	8.40	3.83	0.24	3.08	1.83	8.06	15.91	16.48	42.04	5.73	5.12	9.58	2.91	3.20	0.53	8.54	2.58	4.94	0.36	2.83	3.57
5	394990	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	413013	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	468145	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	481533	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	463083	Transcript	0	17.27	3.89	2.64	1.04	2.24	4.85	4.54	5.78	2.89	1.44	0.46	2.70	1.50	5.66	10.58	16.07	39.20	2.46	6.70	9.20	2.71	6.48	0.50	3.01	2.25	2.30	0.29	4.45	4.24
10	ER1a	ExonRegion	0	4.29	0.04	0.63	1.95	1.44	0.72	1.09	1.00	0.86	0.47	0.20	0.33	1.27	0.49	1.21	3.32	1.99	0.79	0.44	2.60	1.59	2.24	0.95	0.65	1.14	0.37	0.27	0.09	2.56
11	E1_Ab	KnownBoundary	0	10.03	0.00	1.49	7.98	5.60	6.83	2.17	0.00	2.83	3.67	0.00	1.17	2.74	2.08	0.00	6.58	0.99	0.00	0.00	29.03	5.17	6.27	1.97	2.33	0.00	0.00	0.00	0.00	9.81
12	E1_Ac	KnownBoundary	0	2.95	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	1.93	2.19	0.00	0.00	0.00
13	E1_Ad	KnownBoundary	0	46.01	4.75	1.54	40.77	21.81	5.52	14.02	10.15	14.16	5.87	6.45	7.74	9.52	3.19	28.30	46.97	4.19	4.62	16.18	7.53	4.09	36.07	4.58	2.75	7.58	10.47	2.53	8.81	22.05
14	ER1b	ExonRegion	0	60.02	6.57	10.10	29.25	29.89	11.00	16.13	16.57	14.61	10.11	5.95	9.90	15.59	9.98	33.60	43.02	20.03	8.19	9.05	19.67	14.26	46.87	9.04	10.76	10.01	7.86	1.83	6.52	26.84
15	ER1c	ExonRegion	0	70.89	12.44	11.22	26.12	31.67	16.89	21.17	22.09	17.09	10.00	5.95	9.45	17.07	13.22	42.40	54.23	22.97	7.80	10.02	22.69	17.01	60.78	12.14	15.21	13.99	8.19	3.40	9.90	28.09
16	E1_Ae	KnownBoundary	0	162.56	18.52	21.70	94.69	65.29	26.17	70.09	29.61	36.60	28.64	5.63	18.64	19.81	18.74	85.11	107.63	47.70	18.49	32.37	70.21	33.25	117.41	30.88	46.06	29.40	14.25	11.18	38.55	19.68
17	ER1d	ExonRegion	0	177.48	24.97	33.83	137.11	78.71	32.30	80.63	37.37	37.75	30.82	9.34	19.17	30.01	18.69	90.73	150.58	31.75	32.48	40.96	64.50	27.24	124.03	30.20	38.40	24.01	24.67	11.63	34.64	35.50
18	E1_Af	KnownBoundary	0	274.93	36.07	86.26	431.38	158.57	58.28	175.42	74.00	59.26	44.06	20.66	54.67	53.08	43.18	244.37	249.16	98.10	38.27	40.24	153.57	34.70	223.49	41.32	40.61	73.27	80.03	49.55	74.23	92.37
19	ER1e	ExonRegion	0	353.19	68.14	109.02	675.12	187.53	80.00	233.31	70.32	51.25	57.56	18.89	34.99	56.44	44.09	234.50	412.10	48.89	159.17	121.47	272.00	51.44	254.36	71.11	60.58	46.25	83.45	37.46	91.55	48.23
20	E1_Ag	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	1.29	0.00	0.00	9.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E1_Da	KnownBoundary	0	12.45	8.14	8.07	55.86	19.90	5.03	2.75	4.73	0.00	3.44	1.61	1.60	1.31	5.05	7.57	30.14	31.90	23.12	0.00	20.67	5.70	4.28	1.97	0.00	1.63	18.37	2.09	12.58	6.77
22	E1a_E2a	KnownJunction	0	185.45	42.08	211.28	659.80	96.23	54.71	170.73	58.13	13.79	23.37	11.61	22.44	41.84	43.89	132.15	246.63	129.23	50.60	7.87	175.40	39.71	161.12	65.06	23.93	27.96	71.45	19.88	71.89	53.32
23	E1a_E2b	NovelJunction	0	0.00	0.00	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.75	0.00	0.00	3.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	2.16	0.00
24	ER1f	ExonRegion	0	314.55	68.98	133.25	771.49	193.03	77.33	228.28	63.98	36.80	45.12	20.23	27.83	50.01	42.63	219.82	401.12	55.09	156.93	91.65	297.23	47.78	221.74	73.69	46.25	40.02	94.30	39.38	89.24	43.96
25	ER1g	ExonRegion	0	316.52	62.96	136.33	771.49	186.81	79.73	221.73	66.28	36.33	44.76	21.03	29.07	48.28	45.05	185.75	402.81	59.44	135.09	70.90	289.50	51.11	232.55	73.54	44.82	41.21	101.11	39.68	94.00	49.21
26	ER1h	ExonRegion	0	46.66	6.62	11.91	15.26	4.59	9.63	9.10	7.90	8.27	9.26	1.91	8.13	8.68	13.94	16.74	40.34	46.00	16.02	7.18	29.50	10.08	31.30	5.10	15.73	10.53	26.47	5.68	14.22	11.56
27	E1_Db	NovelBoundary	0	10.62	0.00	1.17	0.00	0.00	1.96	2.75	4.98	1.89	1.48	0.00	1.54	0.00	4.36	0.00	3.67	26.52	0.00	0.00	15.63	1.89	6.22	0.00	5.74	1.52	5.62	0.00	4.58	0.00
28	E1b_E2a	KnownJunction	1	23.59	17.45	18.94	21.14	0.00	4.99	2.69	7.22	6.24	7.95	4.52	17.05	9.20	17.37	15.95	33.58	66.13	0.00	8.09	64.34	7.26	28.78	6.99	14.54	18.26	31.11	16.35	19.19	26.05
29	E1b_E2b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00
30	I1	Intron	0	29.93	1.14	2.67	1.27	0.58	4.31	2.03	1.96	3.09	1.88	0.28	0.66	0.77	6.34	3.74	14.10	30.38	3.08	3.59	6.20	2.70	4.16	0.32	6.11	5.16	1.30	0.33	3.18	1.35
31	I1_AR1	ActiveIntronRegion	0	29.83	1.03	2.14	1.15	1.56	2.89	1.67	2.35	1.47	1.62	0.00	0.40	0.99	5.84	2.63	13.83	29.15	2.77	4.16	5.98	4.69	6.92	0.58	4.09	4.92	2.26	0.82	3.68	2.78
32	I1_AR2	ActiveIntronRegion	0	28.08	1.92	0.30	0.00	0.00	1.86	2.18	0.00	3.35	2.14	0.00	0.91	2.68	5.06	0.47	12.65	26.58	3.23	2.04	7.59	3.83	3.31	0.00	5.02	3.48	0.00	0.27	1.17	0.00
33	I1_SR1	SilentIntronRegion	0	30.40	1.13	3.35	1.53	0.00	5.60	2.26	1.96	4.15	2.04	0.51	0.81	0.37	6.88	4.93	14.55	31.89	3.29	3.41	6.22	1.25	2.47	0.19	7.64	5.57	0.84	0.00	3.13	0.57
34	E2_Aa	NovelBoundary	0	26.48	0.00	8.42	10.78	0.00	7.14	0.00	0.00	0.00	0.00	0.00	1.36	0.00	8.06	24.32	10.94	31.96	13.87	0.00	0.00	5.25	2.48	0.00	11.48	1.86	0.00	0.00	6.29	0.00
35	ER2a	ExonRegion	0	230.34	29.96	93.33	176.51	77.09	39.87	86.73	74.13	82.79	42.42	15.52	39.18	38.12	64.73	112.78	120.45	168.30	43.05	34.82	200.65	41.48	191.92	31.54	94.13	64.04	62.59	34.44	70.28	66.81
36	E2_Da	KnownBoundary	0	609.79	41.30	75.92	89.30	40.53	59.74	99.55	187.82	124.95	39.99	38.02	53.61	76.90	142.29	224.83	195.45	230.31	51.63	64.74	413.50	72.20	447.33	43.39	217.13	147.56	58.88	30.56	82.94	106.86
37	E2a_E2b	KnownJunction	0	33.92	12.70	10.19	10.57	7.22	10.59	7.67	4.73	22.90	4.67	2.78	8.40	9.84	5.96	9.77	6.58	10.71	0.00	0.00	17.37	5.58	49.83	2.51	10.23	7.20	12.75	0.00	13.57	8.09
38	E2a_E2c	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	1.58	1.17	0.00	1.02	0.00	0.00	1.98	0.00	0.00	3.89	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	1.58
39	ER2b	ExonRegion	0	548.30	109.50	86.90	110.79	60.11	135.13	251.03	200.06	205.21	86.29	37.13	94.97	130.83	151.30	375.61	410.86	376.05	131.86	119.86	540.35	97.04	381.76	70.01	162.45	195.91	153.18	26.07	101.85	163.63
40	E2_Db	KnownBoundary	0	25.66	9.50	1.45	10.78	0.00	8.94	7.78	6.47	11.12	2.04	0.00	2.74	1.62	4.36	17.14	20.81	46.14	4.62	8.09	14.14	1.89	3.94	0.00	5.80	1.67	0.00	0.00	3.73	1.39
41	E2b_E2b	KnownJunction	0	201.85	117.70	71.56	68.37	70.44	146.33	368.75	89.18	222.70	108.89	28.98	98.67	136.42	103.96	496.70	569.00	439.16	140.25	161.85	396.29	64.02	152.37	90.37	132.19	162.60	156.08	14.71	135.92	194.12
42	E2b_E2c	KnownJunction	0	10.26	4.65	1.35	0.00	0.00	6.60	13.67	4.58	12.03	0.00	0.00	6.14	10.95	6.31	16.14	25.24	8.08	0.00	8.09	20.26	1.68	14.93	6.85	0.00	0.00	1.80	0.00	2.25	4.89
43	ER2c	ExonRegion	0	39.89	3.81	4.57	1.47	0.37	4.65	5.90	6.63	8.40	3.83	0.24	3.08	1.83	8.06	15.91	16.48	42.04	5.73	5.12	9.58	2.91	3.20	0.53	8.54	2.58	4.94	0.36	2.83	3.57
44	E2_Ab	KnownBoundary	0	53.68	0.00	13.45	0.00	0.00	1.96	10.76	0.00	15.68	8.91	0.00	2.77	0.00	17.50	27.31	19.28	65.19	0.00	0.00	0.00	4.09	7.05	0.00	21.77	1.93	5.66	2.24	0.00	0.00
45	ER2d	ExonRegion	0	417.89	148.48	100.94	84.53	59.78	145.50	375.66	168.94	235.09	135.08	64.12	136.60	163.78	159.86	418.70	516.37	628.16	178.27	167.64	465.90	85.24	280.29	108.50	180.18	178.09	205.51	62.27	202.65	251.58
46	ER2e	ExonRegion	0	22.24	6.96	3.74	2.39	2.85	4.85	3.55	1.53	5.13	2.85	0.83	2.54	1.37	7.53	11.17	19.03	33.54	5.30	3.67	7.95	2.72	2.96	0.64	9.44	3.56	2.52	2.03	4.14	2.54
47	E2_Ac	KnownBoundary	0	23.48	4.85	1.27	9.27	0.00	5.29	5.78	0.00	6.85	1.80	0.00	0.00	0.00	7.16	25.11	19.97	44.95	9.25	8.09	6.95	1.72	9.77	0.00	10.83	0.00	5.79	6.26	5.84	3.50
48	ER2f	ExonRegion	0	574.35	162.34	137.33	128.56	88.81	122.74	419.54	224.44	227.02	148.53	98.01	201.04	164.68	218.43	426.18	355.99	897.53	135.78	159.52	506.03	90.04	415.52	142.22	202.88	211.51	320.37	143.63	384.83	251.71
49	E2_Dd	KnownBoundary	0	8.85	0.00	0.95	0.00	0.00	1.92	0.00	8.11	0.00	0.00	1.27	1.45	0.00	2.81	0.00	0.00	16.43	0.00	0.00	0.00	1.85	6.17	0.00	0.00	3.86	0.00	0.00	4.27	3.04
50	E2d_E2d	KnownJunction	0	665.89	172.67	224.23	213.75	156.80	135.28	512.47	299.84	318.20	159.34	90.29	162.77	178.90	247.60	555.90	384.25	899.02	163.75	185.90	756.61	109.30	496.19	80.13	233.82	282.09	264.27	71.47	296.59	209.70
51	E2_De	KnownBoundary	0	8.55	4.75	2.89	0.00	0.00	0.00	0.00	2.49	5.30	0.00	0.00	4.85	0.00	1.06	8.37	15.15	18.44	4.62	0.00	0.00	0.00	1.99	0.00	2.93	0.00	0.00	0.00	0.00	0.00
52	ER2g	ExonRegion	0	15.00	3.28	3.05	0.00	0.00	2.06	1.58	7.23	4.01	0.00	1.96	3.98	0.09	3.82	8.00	11.03	28.12	5.46	2.59	2.21	1.63	6.05	0.00	2.15	1.43	0.90	0.00	4.89	3.45
53	ER2h	ExonRegion	0	17.27	3.89	2.64	1.04	2.24	4.85	4.54	5.78	2.89	1.44	0.46	2.70	1.50	5.66	10.58	16.07	39.20	2.46	6.70	9.20	2.71	6.48	0.50	3.01	2.25	2.30	0.29	4.45	4.24
54	E2_Ad	KnownBoundary	0	5.01	4.65	0.00	0.00	0.00	4.95	5.44	2.54	1.55	1.96	0.00	0.00	0.00	4.28	17.54	18.05	36.15	4.62	8.09	0.00	2.05	0.00	0.00	0.00	1.40	0.00	0.00	6.52	7.76
55	ER2i	ExonRegion	0	532.19	138.94	122.88	228.62	100.02	116.11	287.89	193.79	227.90	97.33	61.23	119.80	120.09	175.06	381.16	257.79	544.67	97.93	143.85	459.00	81.89	420.54	64.95	182.08	175.40	194.02	67.03	207.12	173.00
56	E2_Df	KnownBoundary	0	97.15	27.15	34.71	28.69	13.56	19.07	35.24	32.20	76.01	10.75	15.98	22.26	21.02	16.24	144.91	54.24	78.58	37.76	48.55	99.90	14.80	78.18	11.52	53.24	40.42	28.97	26.99	20.26	27.34
57	ER2j	ExonRegion	0	140.52	27.19	95.06	46.72	17.85	32.61	47.71	54.98	84.42	24.22	14.91	20.34	28.72	29.61	118.70	60.46	98.86	29.79	32.94	81.35	23.06	90.64	10.85	63.52	37.84	24.71	31.54	20.33	57.34
58	E2_Dg	KnownBoundary	1	172.71	43.05	140.25	56.08	20.63	49.80	113.63	100.23	160.15	32.40	16.80	29.25	41.75	43.80	101.06	84.53	150.70	18.75	32.37	67.48	35.94	119.94	10.93	58.62	23.98	25.15	35.43	7.95	100.92
59	ER2k	ExonRegion	0	218.83	46.05	97.45	68.93	35.42	69.73	104.22	72.89	113.29	50.77	30.11	16.65	41.35	43.71	156.40	48.55	71.23	22.89	63.53	182.07	59.27	147.29	18.52	95.49	109.32	88.04	58.41	79.66	116.94
60	ER2l	ExonRegion	0	3.57	1.75	2.62	1.46	1.00	0.18	2.15	0.00	1.20	0.00	0.00	0.41	0.17	0.85	1.49	0.00	0.47	0.00	2.41	6.00	0.00	0.24	0.72	2.72	3.72	2.10	1.83	1.41	2.51