Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TCF19	Gene	0	168.13	216.11	296.65	571.46	55.80	185.02	145.58	301.35	266.59	500.61	216.43	330.13	399.05	138.62	75.54	118.56	169.15	176.99	204.18	55.21	113.06	187.27	181.87	93.61	80.79	153.39	117.69	156.44	152.31
2	376257	Transcript	0	63.18	28.20	53.70	76.22	11.71	43.53	33.25	72.44	17.78	112.72	35.71	103.13	77.38	30.39	22.01	23.58	42.05	42.32	38.57	12.69	30.18	64.95	27.32	5.44	9.33	20.89	16.30	42.43	51.84
3	376255	Transcript	0	16.04	18.13	4.86	20.92	14.59	3.22	8.35	21.25	6.15	17.06	16.96	4.19	10.73	28.67	0.00	34.65	18.37	4.62	8.09	18.03	13.76	8.80	34.67	17.35	13.83	42.18	0.00	5.89	4.29
4	496421	Transcript	0	0.00	0.00	2.77	0.00	0.00	0.00	0.00	1.89	0.00	5.67	0.00	9.22	7.45	5.67	0.00	0.00	7.68	0.00	0.00	0.00	0.00	6.90	0.00	0.00	0.00	0.00	0.00	0.00	2.05
5	IG23	Intergenic	0	0.67	1.00	2.60	10.03	0.00	1.07	0.63	0.00	0.17	0.45	0.74	0.58	0.20	3.79	3.14	13.35	8.59	1.50	0.00	11.09	0.44	0.84	1.41	3.68	3.11	6.11	0.00	0.00	0.31
6	IG23_SR1	SilentIntergenicRegion	0	0.00	0.00	0.06	0.87	0.00	1.14	0.00	0.00	0.29	0.00	0.00	0.15	0.00	0.02	0.00	1.29	0.10	3.33	0.00	0.05	0.00	0.09	0.00	0.00	0.02	0.85	0.00	0.00	0.00
7	IG23_AR2	ActiveIntergenicRegion	0	0.90	1.35	3.50	13.33	0.00	1.15	0.85	0.00	0.17	0.61	1.00	0.74	0.27	5.12	4.24	17.70	11.57	1.21	0.00	14.94	0.60	1.11	1.90	4.97	4.19	8.04	0.00	0.00	0.42
8	ER1a	ExonRegion	0	0.71	0.00	1.31	20.72	0.83	0.69	1.34	3.38	0.00	3.85	0.20	2.47	0.00	2.72	2.80	0.42	2.34	1.82	10.56	2.81	1.90	2.70	3.01	0.00	0.00	1.57	3.05	4.08	0.00
9	ER1b	ExonRegion	0	34.98	33.06	72.90	305.17	23.40	43.13	35.74	60.58	17.59	89.71	39.33	97.32	70.13	45.24	27.20	56.07	67.76	66.70	46.09	15.72	28.12	65.95	83.64	9.60	16.92	62.58	29.43	61.41	71.53
10	E1_Da	NovelBoundary	0	22.65	4.85	18.71	8.84	0.00	16.38	5.32	27.42	4.20	16.38	6.23	10.63	12.61	14.03	0.00	10.33	18.84	9.25	0.00	11.00	10.99	21.34	2.46	11.42	3.22	14.55	0.00	2.29	10.50
11	E1a_E2a	KnownJunction	0	57.45	14.25	11.49	17.47	7.37	23.67	31.70	64.75	6.49	63.79	15.85	80.18	71.49	18.81	24.52	6.20	16.48	14.64	16.18	4.13	16.53	56.93	11.08	0.00	6.86	1.93	2.44	41.61	45.03
12	E1a_E2b	KnownJunction	0	16.04	18.13	4.86	20.92	14.59	3.22	8.35	21.25	6.15	17.06	16.96	4.19	10.73	28.67	0.00	34.65	18.37	4.62	8.09	18.03	13.76	8.80	34.67	17.35	13.83	42.18	0.00	5.89	4.29
13	I1	Intron	1	34.55	9.18	33.33	56.74	1.43	45.93	31.31	29.68	13.49	88.87	25.46	41.74	45.78	25.08	11.07	42.94	45.07	44.14	32.77	20.45	25.08	47.56	23.32	15.13	9.64	30.86	15.57	24.37	35.51
14	I1_AR1	ActiveIntronRegion	1	34.94	9.28	33.71	57.40	1.45	46.47	31.68	30.02	13.65	89.86	25.75	42.21	46.30	25.38	11.20	43.42	45.57	44.65	33.15	20.69	25.38	48.10	23.59	15.31	9.75	31.22	15.75	24.65	35.90
15	E2_Aa	NovelBoundary	0	66.12	34.90	73.20	79.37	0.00	65.07	43.20	50.26	41.60	112.13	38.09	66.69	92.48	43.67	24.32	75.12	93.08	78.60	56.65	24.73	33.89	61.55	25.51	20.58	17.28	33.82	12.13	18.83	40.97
16	ER2a	ExonRegion	0	131.38	70.35	148.32	190.48	26.92	106.23	66.70	149.19	46.86	270.52	91.08	226.73	160.64	69.64	38.71	64.11	107.33	110.50	88.96	31.13	72.10	135.21	67.88	16.32	21.14	59.16	43.41	81.61	110.48
17	E2_Ab	KnownBoundary	0	120.98	71.16	144.53	218.06	7.37	153.70	65.22	107.59	27.65	269.63	85.60	206.92	158.43	63.57	32.49	77.03	92.15	102.49	121.39	19.35	95.54	124.85	59.89	2.57	33.49	55.19	33.79	107.12	131.49
18	ER2b	ExonRegion	0	194.55	157.17	295.02	368.28	54.24	177.69	123.77	232.97	86.95	392.52	178.17	325.73	271.58	159.39	56.08	124.37	185.22	172.20	176.14	59.23	107.83	202.46	211.33	69.88	80.20	170.63	87.82	156.01	127.67
19	E2_Da	NovelBoundary	0	27.02	0.00	3.74	10.35	0.00	15.69	12.93	9.85	12.64	8.07	2.63	10.45	1.62	3.99	0.00	2.98	18.84	4.62	8.09	0.00	1.72	4.62	0.00	0.00	3.22	4.85	9.94	11.05	0.00
20	E2a_E3a	KnownJunction	0	263.43	199.04	447.67	428.80	71.48	213.17	155.22	373.44	190.97	393.98	167.06	288.40	304.50	184.70	43.85	141.06	164.68	184.17	193.99	63.60	108.82	290.68	248.27	108.03	78.76	177.32	66.15	177.66	118.22
21	I2	Intron	1	23.59	7.13	5.24	27.07	1.88	17.24	19.09	21.91	19.87	20.79	8.22	19.42	4.14	6.37	13.48	10.87	34.68	14.75	6.54	3.81	5.20	1.27	1.39	3.58	2.29	2.51	0.70	5.74	2.91
22	I2_SR1	SilentIntronRegion	1	23.65	7.15	5.26	27.14	1.88	17.28	19.14	21.96	19.92	20.84	8.25	19.47	4.16	6.38	13.51	10.90	34.76	14.79	6.56	3.82	5.22	1.27	1.39	3.59	2.29	2.52	0.70	5.75	2.92
23	E3_Aa	NovelBoundary	0	49.78	27.92	12.46	51.55	0.00	24.82	21.34	25.28	38.52	32.60	2.44	24.73	8.98	7.60	0.00	22.57	44.70	9.25	16.18	8.19	3.17	12.54	0.00	14.48	1.86	10.34	0.00	10.24	9.01
24	ER3a	ExonRegion	0	268.16	163.47	463.24	473.21	69.74	221.39	172.03	344.09	157.29	417.52	187.19	351.11	313.75	195.56	63.52	112.68	180.84	198.51	167.46	86.24	132.80	292.57	214.61	101.67	83.01	161.30	123.68	171.11	153.47
25	E3_Ab	KnownBoundary	0	242.49	144.75	487.98	619.04	64.55	234.58	205.74	327.56	167.49	461.29	195.79	391.41	321.02	195.55	75.14	103.43	213.70	196.24	169.94	90.97	158.72	274.74	198.43	105.57	79.26	157.41	170.46	172.36	180.22
26	ER3b	ExonRegion	0	261.30	180.74	485.48	573.06	49.98	275.91	252.21	336.38	177.24	625.14	226.95	363.10	382.68	188.76	101.89	152.61	229.57	215.93	192.08	88.49	156.92	243.80	271.65	102.58	102.90	163.55	105.03	209.24	194.47
27	E3_Da	KnownBoundary	0	278.71	263.71	450.98	653.76	61.75	374.62	311.48	348.46	192.34	803.47	230.01	338.52	413.21	158.53	124.38	153.84	233.74	231.94	258.96	79.64	194.21	310.71	264.47	122.50	133.09	248.43	79.12	220.84	168.90
28	E3a_E3c	KnownJunction	0	0.00	0.00	2.77	0.00	0.00	0.00	0.00	1.89	0.00	5.67	0.00	9.22	7.45	5.67	0.00	0.00	7.68	0.00	0.00	0.00	0.00	6.90	0.00	0.00	0.00	0.00	0.00	0.00	2.05
29	ER3c	ExonRegion	0	229.52	158.62	445.53	477.26	45.86	290.18	245.32	312.96	153.44	532.10	187.72	298.00	345.22	155.58	80.15	156.24	177.89	210.05	169.54	59.85	170.26	260.17	276.32	97.07	78.52	199.83	115.42	188.21	144.65
30	E3_Ac	KnownBoundary	0	260.95	188.47	414.21	639.31	62.93	350.95	325.04	353.44	238.53	787.17	266.02	356.98	413.34	173.82	102.25	196.68	220.86	268.03	267.05	56.40	202.28	237.40	305.55	80.21	106.91	288.68	92.54	249.19	172.36
31	ER3d	ExonRegion	0	208.92	165.72	451.34	1210.68	74.17	147.24	169.46	298.97	170.68	488.38	159.66	299.84	369.48	150.28	76.40	124.39	164.09	209.79	159.54	51.26	96.60	231.93	208.21	72.91	76.73	165.70	72.60	163.54	132.07
32	E3_Db	NovelBoundary	0	22.12	4.85	1.42	9.06	0.00	0.00	0.00	0.00	0.00	4.91	1.36	2.80	1.97	0.97	0.00	0.00	6.12	13.87	16.18	0.00	0.00	0.00	0.00	0.00	1.55	4.08	0.00	2.29	2.05
33	E3b_E4a	KnownJunction	0	169.41	126.13	352.17	468.91	79.73	144.19	136.57	286.05	187.25	361.95	156.15	383.25	338.28	152.04	64.78	98.53	181.02	154.12	153.76	80.05	77.09	179.01	180.75	70.82	72.32	165.43	101.13	202.73	146.78
34	I3	Intron	0	7.66	2.69	1.45	2.33	0.00	3.72	1.31	0.60	3.70	16.57	2.58	1.07	1.19	1.27	3.28	1.19	4.69	4.55	6.57	0.60	1.85	0.98	0.00	1.86	0.77	1.19	0.40	0.35	0.65
35	I3_AR1	ActiveIntronRegion	0	7.43	1.25	1.01	1.64	0.00	3.07	0.92	0.42	3.67	13.75	1.23	0.52	1.04	0.96	3.57	1.54	5.51	4.00	5.99	0.00	1.58	1.24	0.00	2.05	0.98	1.08	0.71	0.60	0.31
36	I3_SR1	SilentIntronRegion	0	7.93	4.02	1.86	2.97	0.00	4.34	1.67	0.76	3.76	19.26	3.82	1.58	1.34	1.57	3.05	0.88	3.98	5.09	7.16	1.14	2.12	0.75	0.00	1.71	0.59	1.30	0.11	0.13	0.97
37	E4_Aa	NovelBoundary	0	0.00	12.51	2.72	20.71	0.00	0.00	2.29	0.00	6.33	2.20	0.00	1.36	1.62	3.52	0.00	2.75	6.28	0.00	8.09	0.00	1.89	2.29	0.00	0.00	0.00	0.00	0.00	0.00	2.05
38	ER4a	ExonRegion	0	207.61	230.17	411.56	751.56	71.10	168.80	177.69	491.54	324.31	602.44	237.22	476.99	545.88	159.53	84.18	136.18	221.14	237.01	200.43	66.85	122.95	240.06	216.21	118.99	107.88	213.96	117.14	210.51	188.30
39	E4_Da	KnownBoundary	0	251.87	367.73	483.10	1026.05	106.70	307.21	315.60	804.66	684.42	1124.75	439.25	677.61	960.87	249.46	186.76	191.86	289.27	366.28	275.14	72.78	189.92	283.00	294.71	174.42	168.70	353.87	218.82	289.04	298.57
40	ER4b	ExonRegion	0	138.34	318.09	237.36	588.49	58.24	217.80	145.99	311.94	454.18	606.41	293.69	331.91	510.32	137.50	93.24	119.79	161.75	167.94	282.81	55.76	123.60	158.55	164.36	124.88	90.41	141.59	171.01	152.10	171.08
41	IG24	Intergenic	0	5.94	8.93	0.00	3.97	0.00	5.33	1.12	4.08	6.84	8.00	5.28	1.71	3.23	1.51	5.11	3.74	0.83	1.07	3.54	1.53	3.16	6.00	3.01	0.00	1.58	1.74	1.02	3.61	0.74
42	IG24_AR1	ActiveIntergenicRegion	0	6.01	9.02	0.00	4.02	0.00	5.39	1.13	4.13	6.91	8.09	5.34	1.73	3.27	1.53	5.17	3.78	0.84	1.08	3.58	1.54	3.20	6.06	3.02	0.00	1.60	1.76	1.03	3.65	0.75