Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	PPIL1	Gene	0	836.08	216.69	249.28	530.66	314.17	432.56	731.37	847.94	206.33	358.50	310.25	276.32	330.63	411.65	409.06	306.43	232.81	163.96	936.71	228.64	497.65	296.42	319.51	193.42	261.56	153.63	334.32	203.29	208.59
2	373699	Transcript	0	562.19	63.94	173.17	365.60	183.75	238.32	581.81	613.41	77.82	275.39	234.47	240.65	226.16	304.09	237.84	252.17	157.01	140.40	394.67	140.49	255.81	211.60	281.76	94.15	165.32	166.91	165.83	159.50	169.84
3	483552	Transcript	0	1.65	1.16	0.02	0.21	0.00	0.57	0.09	0.84	0.00	1.13	0.13	0.20	0.05	0.36	1.70	0.07	0.03	0.06	2.39	1.07	0.10	0.03	0.69	0.00	0.05	0.73	0.08	0.02	0.02
4	ER1a	ExonRegion	0	293.94	36.91	91.48	336.00	199.42	161.23	226.26	217.03	25.87	109.83	84.24	81.84	75.22	131.02	75.10	139.19	77.09	75.84	186.56	49.41	164.40	121.24	165.37	33.75	51.16	91.98	86.01	101.09	63.99
5	E1a_E2a	KnownJunction	0	263.61	29.47	275.28	272.42	178.61	144.57	203.57	314.32	48.45	138.09	144.32	240.57	182.15	250.17	71.36	105.34	178.63	88.62	202.31	80.38	134.65	97.62	196.46	62.51	91.08	163.16	107.99	156.95	157.24
6	E2_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	806.07	106.58	162.16	383.14	178.63	362.78	588.22	996.64	100.06	293.43	173.46	206.08	232.72	380.86	237.65	280.36	137.30	131.79	437.43	210.46	407.52	342.14	252.67	122.98	204.84	147.48	160.93	170.52	163.91
8	E2_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	3.11	0.00	0.00	1.16	0.00	0.00	0.00	0.00	4.14	0.00	3.75	2.41	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
9	E2a_E4a	KnownJunction	0	885.14	82.80	163.74	470.86	178.32	284.69	1309.19	925.65	136.91	560.20	535.86	434.12	414.55	454.32	567.26	483.78	235.00	265.34	752.37	221.72	316.67	285.38	512.54	157.37	314.22	265.04	308.37	209.43	294.22
10	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I2_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.45	0.00	0.00	0.87	0.00	0.00	0.00	0.00	0.00	2.18	0.00	0.22	0.30	3.27	0.00	1.43	0.00	0.00	0.00	2.86	0.00	0.00	0.00	0.00
12	E3_Aa	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	0.00	0.00	0.00	2.68	1.88	0.00	0.00	0.00	0.00	0.00	0.00	4.34	0.00	0.00	0.00	3.85	0.00	0.00	3.05	0.00	1.93	0.00	0.00	0.00
13	ER3a	ExonRegion	0	3.29	2.31	0.05	0.41	0.00	1.14	0.17	1.69	0.00	2.26	0.27	0.40	0.09	0.73	3.39	0.14	0.06	0.12	4.78	2.14	0.20	0.05	1.38	0.00	0.10	1.46	0.15	0.05	0.04
14	E3_Da	NovelBoundary	0	3.01	0.00	0.00	9.06	0.00	0.00	0.00	0.00	0.00	3.67	1.39	1.27	1.46	0.93	0.00	0.00	0.00	0.00	0.00	6.78	5.41	0.00	0.00	3.05	0.00	0.00	0.00	2.07	0.00
15	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	I3	Intron	0	1.99	0.37	0.29	1.25	0.00	1.03	0.12	0.21	1.07	2.01	0.21	0.57	0.49	1.13	0.58	0.25	2.42	1.34	1.29	0.64	2.64	0.00	0.10	1.49	0.74	0.73	0.42	0.66	0.08
17	I3_SR1	SilentIntronRegion	0	1.43	0.00	0.56	1.19	0.00	1.37	0.34	0.31	0.00	2.17	0.20	0.00	0.54	0.60	0.77	0.00	2.74	0.96	1.06	0.46	2.62	0.00	0.30	2.15	0.95	1.57	0.00	0.27	0.00
18	I3_SR2	SilentIntronRegion	0	2.30	0.58	0.15	1.28	0.00	0.86	0.00	0.16	1.65	1.93	0.21	0.88	0.46	1.41	0.49	0.38	2.27	1.55	1.43	0.74	2.68	0.00	0.00	1.15	0.64	0.28	0.65	0.87	0.12
19	E4_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	4.87	2.40	0.00	0.00	1.96	4.27	1.11	0.00	2.92	0.00	3.75	5.94	0.00	0.00	0.00	4.09	0.00	0.00	0.00	1.93	0.00	0.00	1.80	0.00
20	ER4a	ExonRegion	0	877.68	111.45	195.21	333.94	266.55	253.82	791.87	1002.29	103.84	337.80	449.58	387.63	312.84	436.88	396.26	275.41	257.95	175.06	645.42	223.10	267.62	303.83	408.46	170.97	229.89	222.56	550.60	221.87	259.93
21	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.35	0.00	0.00	0.00	0.00	0.00	0.00	2.25	4.62	0.00	0.00	3.85	0.00	1.92	0.00	0.00	0.00	0.00	1.98	0.00
22	E4a_E5a	KnownJunction	0	995.26	140.77	280.67	369.05	435.19	275.75	731.78	1007.06	113.50	289.81	228.69	287.01	248.51	454.23	487.14	255.20	243.91	155.14	670.55	272.16	372.02	286.36	366.17	203.37	220.68	191.53	458.51	223.13	188.18
23	I4	Intron	0	2.97	1.02	0.31	0.00	0.90	3.94	0.00	0.34	0.41	2.93	0.55	0.85	0.00	1.09	0.43	0.00	1.79	1.25	0.89	0.00	3.29	0.33	0.33	0.99	0.13	1.89	0.00	0.90	0.00
24	I4_SR1	SilentIntronRegion	0	1.84	0.00	0.00	0.00	0.36	0.59	0.00	0.00	0.00	0.93	0.00	0.00	0.00	0.00	0.00	0.00	0.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.92	0.00	0.00	0.00
25	I4_AR1	ActiveIntronRegion	0	2.14	0.00	0.00	0.00	4.98	2.95	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.61	0.00	0.00	0.00	0.20	7.86	0.00	0.00	0.00
26	I4_SR2	SilentIntronRegion	0	3.02	1.07	0.32	0.00	0.87	4.05	0.00	0.35	0.43	3.02	0.57	0.89	0.00	1.13	0.44	0.00	1.85	1.30	0.92	0.00	3.43	0.35	0.35	1.04	0.14	1.79	0.00	0.94	0.00
27	E5_Aa	NovelBoundary	0	2.60	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	25.11	0.00	2.43	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	2.20	0.00
28	ER5a	ExonRegion	0	1024.88	295.33	318.49	641.72	382.06	546.35	918.20	1030.79	284.03	452.45	395.76	344.83	428.84	509.95	540.89	372.25	297.07	199.58	1263.72	290.36	636.67	352.26	381.06	255.87	339.72	175.17	427.24	244.47	260.56
29	IG40_SR5	SilentIntergenicRegion	0	1.36	0.80	0.00	0.00	1.55	1.20	0.64	0.00	1.25	0.91	0.38	0.78	0.41	0.74	0.00	3.71	1.42	1.93	1.83	1.29	0.97	0.57	1.16	1.83	0.45	0.00	4.53	0.65	0.00