Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	EEF1E1	Gene	0	234.55	168.10	68.85	336.32	331.57	315.75	532.82	243.79	218.37	136.71	159.21	236.06	291.73	142.72	353.63	167.71	155.26	97.27	891.53	132.94	351.35	77.52	136.71	96.52	106.89	62.51	147.80	53.15	185.47
2	429723	Transcript	0	4.86	3.78	2.52	12.98	16.72	1.67	5.35	3.37	10.68	0.19	3.54	1.12	7.31	1.09	0.52	0.37	1.17	2.13	4.60	0.00	3.58	1.89	3.27	3.41	6.83	2.73	0.94	0.01	0.70
3	379715	Transcript	0	307.78	312.74	105.00	745.32	708.77	563.17	912.27	301.44	400.70	258.19	304.00	373.30	417.77	249.56	685.54	289.51	234.97	167.53	2118.81	225.15	647.12	87.38	172.41	179.11	175.57	60.93	171.65	54.60	241.13
4	488226	Transcript	0	6.63	13.42	0.71	0.00	0.70	5.02	9.53	10.06	2.85	1.84	4.17	3.36	11.99	5.59	7.78	2.12	3.36	1.36	10.24	1.97	7.77	1.03	3.40	6.40	3.56	3.66	0.26	2.09	2.43
5	ER1a	ExonRegion	0	0.00	0.00	1.76	0.00	26.57	0.65	3.94	0.88	2.73	0.07	1.42	0.35	2.35	0.26	0.00	0.12	0.24	0.00	5.39	0.00	5.30	1.29	2.24	0.61	1.43	5.84	1.57	0.00	2.11
6	ER1b	ExonRegion	1	431.08	113.80	229.01	1070.78	829.82	231.22	607.20	415.97	171.16	145.34	123.91	315.69	468.45	136.01	261.59	240.40	237.04	135.23	548.34	123.93	282.15	165.23	295.52	67.02	121.07	154.58	186.48	115.12	351.91
7	E1a_E2a	NovelJunction	0	0.00	0.00	1.30	11.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00	5.18	0.00	0.00	0.00	0.00	0.00	2.66	0.00	0.00	0.00	0.00	2.43	0.00
8	E1a_E3a	KnownJunction	0	117.85	38.20	96.87	192.18	169.77	142.61	246.42	309.49	116.39	59.20	102.27	114.37	236.64	64.76	122.78	29.38	63.48	37.76	169.94	54.91	121.33	51.53	38.32	43.13	76.11	108.23	137.17	25.52	116.93
9	ER2a	ExonRegion	0	4.71	7.63	1.43	0.00	1.39	4.87	5.21	11.26	4.39	2.00	3.90	3.72	7.86	4.23	7.20	4.24	3.79	2.73	12.39	3.94	6.68	2.05	4.44	4.30	2.31	1.31	0.52	2.20	3.20
10	E2_Da	NovelBoundary	0	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E2a_E3a	KnownJunction	0	8.55	19.20	0.00	0.00	0.00	5.18	13.85	8.86	1.31	1.68	4.43	3.01	16.11	6.96	8.37	0.00	2.93	0.00	8.09	0.00	8.86	0.00	2.36	8.49	4.81	6.01	0.00	1.98	1.65
12	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	2.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	733.52	226.11	54.20	239.96	170.70	383.14	559.99	796.39	303.50	164.41	156.11	209.93	438.86	225.49	364.93	272.78	163.41	146.43	881.30	253.51	460.36	290.66	148.89	180.83	231.50	91.67	105.31	50.72	212.26
14	E3_Da	KnownBoundary	0	610.68	456.35	59.10	298.73	277.35	1033.16	1690.81	785.50	632.35	548.05	351.11	498.91	941.89	355.04	1291.19	849.90	423.24	546.34	2937.12	312.19	1250.84	157.67	487.72	226.76	424.16	235.17	169.72	166.43	572.55
15	ER3b	ExonRegion	0	427.18	307.89	97.14	214.31	330.93	697.79	1545.35	532.09	425.67	416.02	523.82	698.10	985.64	340.81	698.17	426.17	475.92	271.49	1709.22	252.07	736.57	120.39	599.89	202.82	288.14	320.24	625.64	263.94	667.74
16	E3_Db	NovelBoundary	0	7.90	0.00	0.00	0.00	0.00	1.42	0.00	0.00	1.89	5.63	1.36	0.00	1.43	0.91	0.00	0.00	2.86	0.00	8.09	3.80	7.46	4.76	0.00	6.04	5.80	0.00	0.00	0.00	0.00
17	E3b_E4a	KnownJunction	1	393.14	358.72	164.34	245.67	575.49	616.61	833.62	463.67	415.83	220.86	346.94	469.03	515.34	268.94	500.69	199.59	406.09	118.16	1366.95	278.12	700.97	115.95	243.10	257.92	176.62	94.54	688.01	135.11	250.90
18	I3	Intron	0	1.77	0.96	0.20	0.24	1.07	3.14	1.08	0.19	2.24	1.75	0.66	0.99	1.57	0.48	1.32	1.45	1.98	0.85	7.42	0.32	4.73	0.18	0.46	1.59	0.43	0.19	1.05	0.22	0.36
19	I3_SR1	SilentIntronRegion	0	2.36	0.46	0.24	0.34	1.61	2.65	0.95	0.09	1.48	1.82	0.50	1.19	2.06	0.55	0.65	0.79	1.27	0.26	7.30	0.26	4.77	0.08	0.82	1.52	0.61	0.37	1.64	0.00	0.25
20	I3_AR1	ActiveIntronRegion	0	1.79	0.00	0.30	0.00	0.00	1.51	0.73	0.67	4.07	2.70	0.22	1.57	1.58	0.01	0.00	0.45	3.52	1.44	3.77	0.50	8.80	0.00	0.46	1.17	0.52	0.00	0.66	0.89	0.00
21	I3_SR2	SilentIntronRegion	0	1.56	1.82	0.19	0.27	1.12	3.37	1.47	0.14	2.96	1.88	0.82	0.73	1.46	0.45	1.87	1.42	2.34	1.19	7.71	0.42	3.50	0.35	0.28	1.89	0.33	0.06	0.91	0.31	0.61
22	I3_AR7	ActiveIntronRegion	0	0.66	0.00	0.00	0.00	0.00	5.30	0.31	0.28	0.35	0.22	0.92	0.95	0.40	0.76	2.40	4.59	1.61	0.89	9.84	0.00	6.15	0.00	0.00	0.99	0.22	0.24	0.00	0.00	0.00
23	E4_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	2.92	0.00	6.12	2.00	0.00	0.00	0.00	0.00	7.57	0.00	2.48	4.62	8.09	0.00	3.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER4a	ExonRegion	0	474.67	419.27	305.61	717.78	949.76	701.60	1189.44	487.62	471.28	352.58	409.40	562.98	609.89	346.86	668.81	349.40	358.90	179.27	2089.52	264.73	776.59	139.96	242.44	237.77	248.97	100.47	387.62	105.43	286.43
25	E4_Da	NovelBoundary	0	213.59	101.60	39.39	176.44	86.95	262.82	232.29	26.77	177.51	71.22	45.11	67.80	186.00	51.96	65.58	68.39	42.72	14.00	258.96	56.65	318.32	40.74	45.41	44.02	34.85	19.53	36.73	17.34	18.98
26	E4a_E5a	KnownJunction	0	449.29	422.41	176.20	1156.76	1079.20	742.60	1260.67	441.42	537.21	382.96	443.20	508.18	596.16	350.50	901.32	418.07	324.97	238.75	3073.56	300.86	872.92	128.25	251.62	254.99	258.95	92.44	217.77	77.69	318.84
27	E4a_E6a	KnownJunction	0	8.73	10.66	5.08	27.18	20.78	1.73	7.50	6.52	21.23	0.00	3.92	0.00	11.94	2.06	0.00	0.00	1.94	5.14	8.09	0.00	3.41	2.09	6.16	6.10	14.24	1.97	0.00	0.00	0.00
28	I4	Intron	0	22.73	14.72	2.87	10.76	13.17	18.38	11.64	4.35	11.53	12.82	4.08	18.52	4.34	9.04	9.72	21.69	20.30	11.18	49.85	5.86	42.11	1.01	2.56	6.38	4.57	1.57	4.69	3.05	2.02
29	I4_AR1	ActiveIntronRegion	0	40.59	32.23	0.63	27.59	18.80	81.27	53.91	5.38	25.32	16.74	13.34	16.83	26.35	10.02	18.88	39.57	9.20	22.67	118.70	29.73	99.40	8.12	8.69	15.84	4.58	0.50	25.73	2.09	2.57
30	I4_SR1	SilentIntronRegion	0	14.58	0.00	1.12	0.00	0.00	11.27	2.02	4.66	0.07	7.41	3.81	0.00	0.00	3.57	0.00	18.90	2.00	2.73	19.31	2.81	25.39	1.80	0.00	0.00	0.00	1.57	3.66	0.33	0.00
31	I4_AR2	ActiveIntronRegion	0	20.50	0.00	1.12	0.00	0.00	18.29	2.45	6.80	1.12	13.56	7.14	0.00	0.00	6.31	1.70	20.14	5.05	0.95	29.32	1.22	40.12	1.80	0.00	0.09	0.00	5.19	2.47	1.63	0.00
32	I4_SR2	SilentIntronRegion	0	13.09	0.96	3.60	6.41	2.91	7.70	5.22	2.79	3.46	15.11	4.51	3.31	1.74	8.46	1.24	12.52	8.59	2.30	20.41	5.47	26.52	1.14	1.62	3.77	0.85	0.85	0.55	0.68	1.59
33	I4_AR3	ActiveIntronRegion	0	11.83	1.92	4.74	4.28	5.83	10.45	1.50	3.29	4.85	10.98	2.66	3.59	4.24	8.49	2.06	17.55	12.45	5.89	21.44	3.88	15.94	1.08	1.89	1.28	2.13	2.81	1.37	0.97	1.39
34	I4_AR4	ActiveIntronRegion	0	6.25	3.28	0.00	0.00	0.00	5.44	0.00	1.53	2.01	4.99	1.24	0.52	1.14	5.74	1.87	3.69	7.55	3.41	11.88	1.76	10.94	0.83	0.75	0.00	0.00	0.00	0.00	1.63	1.29
35	I4_SR3	SilentIntronRegion	0	9.70	2.20	2.26	3.73	3.14	6.73	2.71	2.86	2.51	8.05	1.69	4.97	1.41	5.84	1.70	12.11	9.89	6.92	15.56	3.64	16.78	0.71	0.82	1.82	2.23	0.64	1.48	1.18	1.05
36	I4_AR5	ActiveIntronRegion	1	22.29	9.51	4.13	9.05	11.54	21.44	15.40	4.64	4.81	14.47	3.05	11.75	2.31	7.54	5.62	17.91	17.97	11.82	56.58	6.00	48.16	1.21	1.85	1.73	3.16	0.12	3.47	4.95	1.63
37	I4_SR4	SilentIntronRegion	1	27.99	16.08	3.39	9.34	16.18	16.41	14.53	5.39	7.70	13.33	2.25	16.65	1.89	7.15	2.73	20.67	18.05	10.91	48.28	5.88	39.86	0.56	3.70	3.01	3.80	0.68	4.70	2.92	1.37
38	I4_AR6	ActiveIntronRegion	1	19.04	16.77	2.60	8.29	14.49	21.54	11.62	2.23	7.88	11.30	5.69	19.07	1.09	10.38	7.28	25.81	31.78	15.92	74.56	5.49	45.10	0.82	3.71	1.51	4.07	1.26	3.35	3.58	1.79
39	I4_AR7	ActiveIntronRegion	1	26.13	15.61	2.49	18.55	15.45	16.58	11.42	4.92	11.98	13.73	4.83	22.73	4.27	9.64	7.55	19.88	22.75	13.10	52.65	5.19	40.96	1.03	2.71	5.32	5.21	2.51	4.46	3.79	1.81
40	I4_SR5	SilentIntronRegion	0	18.03	17.26	1.72	8.90	18.42	20.40	8.81	1.05	15.81	11.33	5.66	26.27	4.01	9.17	11.91	24.43	25.75	11.95	65.38	4.52	59.23	0.17	1.02	9.80	5.39	1.35	1.30	2.52	2.16
41	I4_AR8	ActiveIntronRegion	0	15.37	18.92	0.52	5.29	17.82	17.29	9.36	0.70	12.61	6.14	5.90	17.91	6.41	6.38	17.94	19.01	19.01	10.84	46.70	4.70	39.67	0.46	0.88	8.30	2.22	1.79	4.97	0.58	2.97
42	I4_SR6	SilentIntronRegion	0	5.14	8.67	1.84	2.63	25.70	27.77	5.32	2.06	9.57	8.26	2.38	13.66	4.83	7.26	6.05	21.97	16.71	26.09	50.51	0.00	57.23	0.00	1.01	14.63	1.20	0.00	3.44	0.65	7.03
43	I4_AR9	ActiveIntronRegion	1	32.92	28.32	3.20	13.05	16.39	21.64	13.37	7.19	27.37	16.15	4.78	35.74	8.12	14.30	26.54	34.85	30.66	11.68	59.17	7.02	52.22	0.89	4.26	17.67	9.45	3.12	9.19	3.70	3.62
44	E5_Aa	NovelBoundary	0	32.97	46.05	0.00	9.06	13.85	49.03	15.62	2.49	71.08	24.13	5.69	45.66	12.16	30.24	85.91	94.63	55.28	4.62	72.83	18.03	50.02	2.24	2.51	22.01	20.61	0.00	11.88	12.31	3.93
45	ER5a	ExonRegion	0	166.26	203.06	33.79	333.88	338.34	383.73	563.87	161.45	264.19	133.42	164.80	238.41	239.39	148.63	469.76	160.95	144.96	96.31	1164.07	149.44	421.32	46.51	93.20	103.22	92.20	29.42	125.53	31.51	163.42
46	E5_Da	NovelBoundary	0	0.00	0.00	0.00	10.78	0.00	3.84	5.61	0.00	1.43	2.04	0.00	1.51	2.74	2.22	8.37	10.71	2.79	0.00	16.18	14.72	7.02	0.00	0.00	8.43	0.00	0.00	7.40	0.00	0.00
47	I5_SR1	SilentIntronRegion	0	1.34	3.84	0.78	10.38	4.97	5.04	7.23	1.01	2.00	3.36	0.79	3.33	2.48	2.93	1.58	1.59	1.71	1.04	16.97	4.79	8.20	0.99	2.26	2.34	2.28	0.12	5.76	1.40	1.74
48	I5_AR1	ActiveIntronRegion	0	10.20	3.81	1.59	25.36	6.84	18.32	12.53	6.11	3.69	4.91	1.43	10.21	5.46	7.02	6.60	0.92	5.90	8.49	30.16	4.89	15.22	5.96	6.00	1.07	7.84	6.65	4.91	0.00	5.54
49	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.45	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	2.87	0.00	0.00	0.00	0.00	0.00
50	ER6a	ExonRegion	0	5.85	0.67	0.73	11.77	2.80	2.64	4.61	2.71	8.07	0.49	5.27	3.01	7.64	0.96	1.56	0.99	1.35	1.25	0.33	0.00	2.02	2.29	1.40	3.50	4.83	0.36	1.24	0.04	0.00