Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RPP40	Gene	0	119.68	27.78	37.73	118.34	73.25	79.08	75.87	69.11	56.22	32.69	32.92	38.61	42.81	17.20	37.47	40.72	26.77	25.65	110.53	33.37	106.93	19.63	35.30	24.38	18.28	18.51	49.75	19.66	50.77
2	483546	Transcript	0	0.92	0.76	2.02	4.30	0.00	1.48	1.90	1.60	0.83	0.74	0.48	0.43	0.61	0.00	0.00	2.30	0.70	0.89	1.20	0.00	0.78	0.21	0.27	0.00	0.00	0.05	0.00	0.86	0.36
3	468105	Transcript	0	0.08	0.12	1.04	0.00	0.00	1.33	0.29	0.00	0.40	0.00	0.04	0.09	0.60	0.52	0.00	0.00	0.18	0.00	0.65	0.00	0.76	0.13	0.00	0.00	0.00	0.00	0.13	0.00	0.10
4	380051	Transcript	0	0.69	0.00	0.76	1.21	0.79	1.13	1.31	0.70	0.18	0.03	0.42	0.77	0.22	2.29	0.80	1.66	2.51	0.75	0.52	0.00	0.69	0.00	0.04	0.00	0.00	0.46	0.01	0.81	0.22
5	380053	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	319533	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	479782	Transcript	0	0.12	0.00	0.12	0.20	0.09	0.00	0.22	0.00	0.00	0.91	0.06	0.03	0.05	0.00	0.00	0.00	0.04	0.00	0.00	0.00	0.04	0.00	0.00	0.00	0.00	0.04	0.00	0.00	0.07
8	464646	Transcript	0	4.43	2.71	1.10	0.00	40.79	0.48	2.00	0.00	3.56	3.28	2.73	10.10	4.60	0.00	1.61	0.10	4.40	0.11	10.36	0.00	18.39	0.00	4.14	1.89	0.90	2.20	1.41	2.51	10.51
9	IG19_AR3	ActiveIntergenicRegion	0	5.36	0.00	3.08	1.72	3.52	0.66	0.48	0.44	1.21	1.84	1.54	1.47	0.00	1.29	3.43	1.27	3.49	1.53	0.34	2.94	1.49	0.75	0.61	1.89	0.94	0.00	0.00	1.47	1.13
10	ER1a	ExonRegion	0	0.50	0.00	3.30	8.60	0.00	1.70	3.79	2.82	1.65	0.34	0.77	0.36	1.22	0.00	0.00	3.42	0.24	1.77	2.40	0.00	0.67	0.42	0.53	0.00	0.00	0.09	0.00	0.96	0.71
11	E1_Ae	KnownBoundary	0	126.88	3.97	36.00	141.49	178.17	205.46	106.48	110.43	92.88	33.99	18.60	27.56	39.68	10.81	39.47	77.03	14.41	55.48	88.79	26.55	310.45	14.54	44.62	4.73	9.13	36.31	48.65	13.43	40.54
12	ER1b	ExonRegion	0	7.29	0.00	7.07	22.67	10.46	18.97	19.55	5.52	8.99	3.75	2.38	3.71	6.50	1.09	5.60	10.12	1.70	5.19	16.75	0.00	17.26	1.80	6.33	0.00	0.00	2.20	0.18	3.10	6.85
13	ER1c	ExonRegion	0	15.00	0.00	7.85	29.25	14.94	32.99	34.27	9.21	11.24	5.78	3.57	6.18	12.99	3.63	11.20	15.18	3.01	5.46	27.15	0.00	32.81	3.61	9.04	0.00	0.00	3.14	1.83	3.26	14.76
14	ER1d	ExonRegion	0	100.51	6.75	31.42	134.07	118.45	131.97	77.27	78.55	57.49	24.86	18.38	24.39	33.34	10.43	25.20	53.15	11.97	38.06	77.19	18.58	209.92	14.02	33.85	4.54	7.54	31.35	39.38	11.59	31.69
15	ER1e	ExonRegion	0	208.71	17.40	88.14	291.50	215.22	137.99	122.19	150.05	76.69	41.62	39.86	50.79	43.66	16.04	36.16	76.44	35.82	34.77	89.34	42.79	252.19	43.70	58.85	20.19	15.43	53.59	67.54	30.79	82.74
16	E1_Da	NovelBoundary	0	17.52	0.00	91.69	41.63	6.19	5.37	21.11	5.08	19.03	9.35	16.67	46.87	21.65	16.13	18.54	28.00	53.32	4.62	16.18	7.36	16.08	4.91	8.72	8.31	8.75	17.90	33.60	10.69	87.78
17	E1a_E3a	KnownJunction	0	142.86	12.12	2.39	9.49	11.20	38.79	46.23	36.63	21.53	11.14	7.75	17.83	18.28	12.63	8.37	18.21	11.14	4.62	64.51	12.65	46.73	14.59	8.47	21.89	3.49	2.10	33.79	3.59	17.46
18	I1_AR1	ActiveIntronRegion	0	20.01	2.61	5.45	28.55	31.63	10.63	7.55	7.10	7.12	23.81	20.16	11.01	2.10	6.61	19.38	52.98	0.00	15.64	10.34	10.35	14.78	10.22	17.51	5.22	17.08	30.51	39.60	6.42	20.90
19	ER2a	ExonRegion	0	3.73	0.76	0.65	0.00	42.24	0.96	4.00	0.00	1.42	1.01	2.53	8.90	4.07	0.00	3.22	0.21	2.68	0.22	4.53	0.00	9.95	0.00	2.08	0.74	0.25	0.67	0.43	3.08	6.32
20	E2a_E3a	KnownJunction	0	5.13	4.65	1.54	0.00	39.35	0.00	0.00	0.00	5.69	5.55	2.94	11.29	5.13	0.00	0.00	0.00	6.12	0.00	16.18	0.00	26.83	0.00	6.21	3.05	1.55	3.73	2.39	1.93	14.69
21	ER3a	ExonRegion	0	299.42	53.10	17.18	65.16	82.45	257.57	203.73	194.43	143.55	65.57	81.59	87.30	80.97	28.14	68.83	124.42	58.27	56.90	213.65	81.80	377.43	55.41	76.93	48.01	32.71	69.63	103.20	40.60	121.46
22	E3_Da	KnownBoundary	0	0.00	0.00	1.07	0.00	0.00	0.00	0.00	2.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E3a_E5a	KnownJunction	0	169.17	22.20	77.56	132.43	233.73	139.39	115.12	22.44	61.21	26.64	58.43	75.39	45.66	11.50	23.72	65.18	65.32	36.99	121.39	67.48	159.12	23.53	54.37	27.40	9.89	11.11	155.45	51.04	86.96
25	E3a_E6a	KnownJunction	0	0.00	0.00	1.30	0.00	0.00	3.15	2.63	0.00	1.89	0.00	1.61	2.65	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	5.80	0.00	0.00	1.89	0.00	0.00
26	ER3b	ExonRegion	0	1.35	1.52	0.75	0.00	0.00	1.27	0.00	0.39	0.00	1.13	0.19	0.49	0.00	0.00	0.00	1.17	1.17	0.01	0.00	0.00	0.90	0.00	0.00	0.00	0.00	0.00	0.00	0.77	0.00
27	E3_Db	NovelBoundary	0	0.00	0.00	2.84	0.00	0.00	0.00	0.00	0.00	0.00	1.96	1.39	0.00	0.00	0.00	0.00	0.00	3.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.28	0.00	0.00	3.22	0.00	1.24	0.00	0.00	1.10	0.00	0.00	3.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER4a	ExonRegion	0	0.35	0.00	0.36	0.59	0.27	0.00	0.65	0.00	0.00	0.74	0.19	0.10	0.14	0.00	0.00	0.00	0.11	0.00	0.00	0.00	0.12	0.00	0.00	0.00	0.00	0.13	0.00	0.00	0.22
30	E4_Da	NovelBoundary	0	8.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER5a	ExonRegion	0	141.66	54.84	127.10	365.74	287.41	161.77	140.34	41.25	78.47	42.33	64.78	62.56	59.94	25.99	62.58	49.55	51.00	36.23	251.35	66.93	164.08	15.23	35.54	35.85	17.61	21.05	107.10	32.44	61.14
33	E5a_E6a	KnownJunction	0	163.74	93.56	121.26	506.66	353.10	147.45	117.40	56.63	102.53	72.30	73.52	60.75	79.48	29.56	73.95	60.36	39.64	53.17	347.75	71.29	176.65	13.76	37.53	36.79	43.64	12.87	129.46	26.73	49.22
34	E6_Aa	NovelBoundary	0	0.00	3.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	9.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.37
35	ER6a	ExonRegion	0	174.40	102.52	92.99	515.69	266.10	212.83	176.19	45.64	90.44	78.28	73.15	82.65	81.97	37.34	62.31	85.57	47.60	58.22	318.36	77.56	232.81	21.31	42.08	54.54	37.36	26.59	125.29	30.38	53.41
36	E6_Da	NovelBoundary	0	17.34	0.00	0.00	0.00	0.00	10.44	0.00	0.00	0.00	2.00	0.00	0.00	2.61	0.00	8.37	0.00	0.00	0.00	0.00	0.00	16.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.09
37	E6a_E7a	KnownJunction	0	166.52	94.24	79.01	406.58	156.95	223.18	210.04	27.12	77.29	53.89	62.98	85.69	65.54	31.73	90.69	82.92	46.98	113.92	396.31	94.69	229.31	14.88	37.77	39.78	9.93	27.34	72.11	26.24	64.15
38	E6a_E8a	NovelJunction	0	106.88	0.00	7.97	41.63	37.58	35.87	0.00	4.83	11.79	3.71	7.66	4.49	11.18	3.41	28.90	6.88	6.55	0.00	16.18	12.07	43.76	2.19	2.12	7.60	12.16	5.49	10.09	1.80	33.51
39	I6	Intron	0	3.67	0.75	0.78	0.00	1.90	2.67	0.78	0.71	2.10	0.45	0.37	1.49	1.46	0.67	0.85	1.30	1.98	0.17	1.74	0.86	3.22	0.14	0.00	1.01	0.45	0.00	0.00	0.38	0.99
40	I6_SR1	SilentIntronRegion	0	3.68	0.75	0.78	0.00	1.91	2.68	0.78	0.72	2.11	0.45	0.37	1.49	1.46	0.67	0.86	1.30	1.99	0.17	1.74	0.86	3.23	0.14	0.00	1.01	0.45	0.00	0.00	0.38	1.00
41	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	5.45	0.00	0.00	0.00	1.60	0.00	2.65	0.00	2.24	0.00	0.00	1.04	0.00	0.00	0.00	16.97	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
42	ER7a	ExonRegion	1	161.07	80.71	71.41	334.29	127.03	191.37	205.03	35.77	71.83	46.20	60.53	87.20	59.38	29.80	77.61	76.83	51.09	81.49	317.13	85.93	233.11	14.04	45.85	41.03	17.87	19.53	82.94	22.94	56.95
43	ER7b	ExonRegion	0	183.90	65.87	52.45	152.59	100.43	150.64	187.48	104.40	97.37	98.69	75.58	84.08	78.10	31.77	98.26	71.38	61.15	58.48	308.28	68.23	203.31	25.21	74.07	42.16	37.09	24.74	103.86	45.76	94.12
44	E7_Db	NovelBoundary	0	0.00	0.00	2.19	0.00	0.00	1.96	0.00	0.00	1.19	0.00	0.00	0.00	1.37	1.04	0.00	0.00	0.00	0.00	0.00	0.00	3.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E7b_E8a	KnownJunction	0	260.83	71.55	46.12	80.02	63.22	128.11	168.78	146.81	109.08	79.89	53.97	80.96	88.24	32.46	49.23	55.16	63.97	47.01	225.69	54.58	154.63	42.93	62.20	55.15	38.11	23.90	39.21	43.63	106.14
46	E7_Dc	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	11.32	2.57	0.00	0.00	2.04	1.49	3.07	0.00	1.04	0.00	0.00	1.08	0.00	0.00	0.00	9.27	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
47	ER7c	ExonRegion	0	0.08	0.12	1.04	0.00	0.00	1.33	0.29	0.00	0.40	0.00	0.04	0.09	0.60	0.52	0.00	0.00	0.18	0.00	0.65	0.00	0.76	0.13	0.00	0.00	0.00	0.00	0.13	0.00	0.10
48	I7	Intron	0	4.46	0.00	0.82	1.76	1.00	3.31	0.99	0.45	1.55	1.88	0.10	1.33	0.79	0.87	0.94	1.42	2.98	1.34	1.82	0.00	4.19	0.15	0.30	1.23	0.29	0.71	2.24	0.27	1.12
49	I7_SR1	SilentIntronRegion	0	4.47	0.00	0.82	1.76	1.00	3.32	0.99	0.45	1.56	1.89	0.10	1.34	0.79	0.87	0.94	1.42	2.99	1.34	1.82	0.00	4.20	0.15	0.30	1.23	0.29	0.71	2.25	0.27	1.12
50	E8_Aa	NovelBoundary	0	5.60	0.00	0.00	0.00	0.00	4.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.37	3.52	6.19	4.62	16.18	3.31	1.80	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
51	ER8a	ExonRegion	0	291.66	54.92	83.16	213.43	99.88	97.27	115.75	170.58	97.81	65.98	50.69	75.31	88.69	36.94	87.67	63.04	57.57	49.07	190.99	57.91	133.34	53.76	79.22	52.06	40.24	24.23	93.71	40.65	109.92
52	E8_Da	NovelBoundary	0	0.00	0.00	3.01	0.00	0.00	0.00	2.86	7.32	2.77	0.00	0.00	0.00	7.90	2.39	8.37	10.17	4.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00
53	E8a_E9a	KnownJunction	0	337.16	121.77	71.38	306.50	117.75	123.74	137.43	196.87	117.70	73.38	90.60	71.47	95.28	42.70	92.09	60.66	48.89	60.88	299.20	64.34	107.50	41.67	111.55	73.87	53.83	21.46	89.26	32.76	141.53
54	I8	Intron	0	2.41	0.00	1.25	0.00	0.00	0.00	3.02	1.38	1.89	0.00	0.00	0.46	0.49	0.34	1.73	2.53	1.12	2.29	0.00	0.00	0.53	0.00	0.68	0.81	1.07	0.00	0.00	0.61	0.00
55	I8_SR1	SilentIntronRegion	0	2.45	0.00	1.27	0.00	0.00	0.00	3.07	1.40	1.92	0.00	0.00	0.47	0.49	0.35	1.76	2.57	1.14	2.32	0.00	0.00	0.54	0.00	0.69	0.82	1.09	0.00	0.00	0.62	0.00
56	E9_Aa	NovelBoundary	0	2.48	0.00	0.00	0.00	0.00	1.96	2.69	0.00	7.52	0.00	0.00	3.13	5.89	1.91	0.00	14.61	4.21	0.00	8.09	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00
57	ER9a	ExonRegion	0	213.92	48.25	54.53	158.93	54.46	88.09	112.64	134.59	111.14	51.88	63.75	66.45	104.71	38.81	74.09	68.82	47.55	47.57	188.01	56.94	106.85	30.03	84.71	50.18	45.43	23.17	79.73	42.05	108.58
58	E9_Da	NovelBoundary	0	7.90	0.00	0.00	0.00	12.08	1.61	0.00	4.93	6.76	0.00	7.28	2.92	2.87	1.04	7.77	7.11	4.84	0.00	0.00	0.00	2.05	0.00	0.00	2.63	1.93	0.00	10.09	0.00	0.00
59	E9a_E10a	KnownJunction	0	158.26	18.03	36.30	55.43	58.36	75.55	82.22	63.35	108.81	18.26	58.02	53.40	76.68	30.13	51.23	44.83	20.71	13.87	121.39	36.64	74.48	15.61	33.39	44.14	34.70	16.14	55.26	34.46	62.63
60	I9	Intron	0	4.38	7.04	0.25	1.08	0.74	5.30	4.12	1.67	1.82	2.29	1.44	0.66	2.20	2.50	4.65	5.39	4.41	3.30	6.53	1.88	6.37	0.27	0.41	2.93	0.54	0.24	4.30	0.99	0.76
61	I9_SR1	SilentIntronRegion	0	4.39	7.06	0.25	1.09	0.74	5.32	4.13	1.68	1.83	2.30	1.45	0.66	2.21	2.51	4.67	5.41	4.42	3.31	6.54	1.88	6.39	0.27	0.41	2.94	0.54	0.24	4.31	0.99	0.76
62	E10_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	7.06	0.00	0.00	6.46	1.76	0.00	0.00	1.62	4.83	0.00	11.32	1.40	9.25	0.00	0.00	0.00	0.00	0.00	2.93	3.30	0.00	0.00	2.16	0.00
63	ER10a	ExonRegion	0	115.75	20.49	47.51	85.80	52.32	62.70	56.66	65.62	84.88	27.33	33.85	37.73	57.67	21.89	36.39	32.65	19.28	20.17	100.09	35.80	70.96	16.31	31.87	38.26	26.79	14.23	53.76	14.24	59.11
64	E10_Da	KnownBoundary	0	30.79	4.85	6.95	114.32	34.34	24.21	11.84	13.93	17.11	13.50	15.31	8.95	18.25	8.93	29.10	3.82	11.59	9.25	72.83	11.91	16.93	4.42	8.96	11.78	12.31	6.22	16.65	13.03	21.69
65	E10_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	E10_Dc	KnownBoundary	0	0.00	0.00	1.22	0.00	0.00	3.15	0.00	6.27	0.00	0.00	0.00	2.83	0.00	2.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER10b	ExonRegion	0	14.49	2.83	5.26	59.51	14.26	12.94	1.60	7.24	7.09	6.77	8.66	5.84	9.68	6.79	15.26	7.16	5.18	8.75	41.67	4.46	7.57	2.05	5.18	6.53	5.52	6.61	8.59	8.15	13.33
68	ER10c	ExonRegion	0	0.00	0.00	3.37	21.94	4.98	8.25	0.00	5.52	1.12	4.33	3.57	3.09	2.60	3.63	5.60	5.06	2.00	5.46	13.58	0.00	0.00	0.00	2.71	2.15	0.00	3.14	3.66	5.71	0.00
69	ER10d	ExonRegion	0	0.69	0.00	0.76	1.21	0.79	1.13	1.31	0.70	0.18	0.03	0.42	0.77	0.22	2.29	0.80	1.66	2.51	0.75	0.52	0.00	0.69	0.00	0.04	0.00	0.00	0.46	0.01	0.81	0.22