Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NHP2	Gene	0	1807.50	377.41	1058.56	2631.36	2736.99	423.01	1812.10	2535.98	786.38	570.29	467.40	1020.19	1189.00	440.14	1345.39	462.00	387.87	513.76	939.15	1065.57	410.41	1325.43	1028.20	389.50	473.45	798.12	697.72	1099.09	868.12
2	274606	Transcript	0	1649.21	358.15	1287.83	2925.91	3069.88	358.28	1564.03	2686.95	794.62	574.75	487.80	1042.47	1200.74	415.70	1175.81	346.39	379.30	372.27	818.53	887.12	303.04	1194.14	1014.41	406.52	474.72	822.84	981.09	1318.57	891.47
3	314397	Transcript	0	57.69	8.53	38.09	53.06	105.52	34.22	127.07	102.12	14.19	34.75	15.94	51.11	47.58	22.58	43.45	27.39	22.35	4.62	32.37	70.54	22.38	50.12	86.93	20.40	24.13	20.38	45.27	42.51	61.57
4	ER1a	ExonRegion	0	5.09	2.05	1.68	21.94	3.74	1.55	17.39	9.21	0.84	1.08	0.45	2.32	0.00	1.02	16.80	0.00	0.38	3.07	0.00	3.16	1.60	4.73	2.71	0.81	1.07	8.45	3.66	8.15	10.23
5	ER1b	ExonRegion	0	1641.60	243.71	1202.62	3209.67	3416.42	390.19	1824.56	1800.08	538.27	434.53	315.62	829.90	1005.24	287.49	992.40	448.77	318.19	468.28	643.34	932.23	427.92	1273.89	918.95	265.41	337.68	839.49	701.98	1085.76	916.96
6	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00	3.82	0.90	4.62	0.00	4.13	0.00	0.00	0.00	2.27	0.00	0.00	0.00	2.11	0.00
7	E1a_E2a	KnownJunction	0	3960.64	829.41	208.24	729.47	618.52	1428.81	6313.02	4881.29	1668.89	1699.76	1010.19	1966.20	2664.42	906.52	3368.10	1675.71	728.08	1291.37	2240.04	2174.00	1502.21	2190.84	2199.59	853.45	1211.91	1619.49	784.97	1732.78	2104.91
8	E2_Aa	NovelBoundary	0	2.24	4.46	0.00	0.00	5.89	0.00	0.00	0.00	1.19	0.00	0.00	1.51	0.00	1.06	0.00	0.00	3.65	0.00	0.00	0.00	0.00	0.00	4.14	0.00	1.89	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	3021.14	737.32	431.92	876.89	1005.06	972.11	4458.98	4817.77	1612.38	1406.81	1109.67	2234.24	2847.98	726.61	2619.57	986.30	779.48	936.92	1983.99	1682.15	942.35	1948.74	2529.63	669.56	1072.96	1867.86	1527.76	2349.70	2303.39
10	E2_Da	NovelBoundary	0	2.83	8.14	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	3.25	0.00	7.97	0.00	2.61	0.00	0.00	0.00	0.00	0.00	0.00	3.05	1.63	1.63	0.00	2.34	0.00
11	E2a_E3a	KnownJunction	0	2813.78	540.01	634.43	1435.86	2097.68	562.93	2773.03	4057.46	1375.02	1114.08	1170.54	2262.55	2429.02	628.54	1919.65	498.16	712.42	535.30	1463.84	1293.25	520.87	2111.79	2459.28	680.10	863.02	2154.72	3107.29	3726.98	2124.55
12	E2a_E4a	KnownJunction	0	57.69	8.53	38.09	53.06	105.52	34.22	127.07	102.12	14.19	34.75	15.94	51.11	47.58	22.58	43.45	27.39	22.35	4.62	32.37	70.54	22.38	50.12	86.93	20.40	24.13	20.38	45.27	42.51	61.57
13	I2	Intron	1	7.20	3.94	2.02	0.93	3.36	3.61	0.26	5.63	4.58	4.41	3.43	5.09	3.54	8.92	6.53	4.90	10.66	3.43	5.91	2.46	6.02	3.57	3.11	7.78	9.53	10.96	5.12	34.94	5.13
14	I2_AR1	ActiveIntronRegion	0	8.93	1.23	0.73	0.00	1.86	2.51	0.00	2.36	3.12	1.65	0.00	0.00	1.41	0.88	2.59	2.89	1.38	1.10	4.26	1.95	1.88	1.57	0.34	1.23	0.27	0.60	0.00	1.98	0.00
15	I2_SR1	SilentIntronRegion	0	2.09	0.59	0.84	0.00	2.61	0.94	0.22	2.61	3.16	1.85	1.27	0.86	1.98	1.64	3.57	2.02	3.37	2.47	2.05	0.59	2.76	0.28	0.97	1.38	2.29	2.86	2.15	10.91	0.79
16	I2_AR2	ActiveIntronRegion	1	13.79	9.39	4.71	3.54	5.62	6.46	0.33	9.79	5.30	9.75	5.04	13.97	6.05	23.43	9.56	8.24	25.39	5.12	10.31	4.53	10.06	10.50	5.96	18.84	21.77	29.48	9.45	76.08	12.84
17	I2_SR2	SilentIntronRegion	1	6.78	9.05	2.60	0.00	3.92	9.07	0.81	13.80	11.39	6.92	14.93	10.21	7.87	18.02	18.74	11.88	21.94	7.87	13.33	5.53	17.26	3.32	10.12	18.80	26.64	18.30	16.63	95.11	13.58
18	E3_Aa	NovelBoundary	1	10.97	3.88	6.65	10.78	20.19	6.71	0.00	8.51	9.96	23.77	20.31	22.53	9.65	33.61	0.00	11.02	31.92	4.62	16.18	15.22	12.88	17.94	20.54	17.11	23.00	26.69	38.52	124.64	27.63
19	ER3a	ExonRegion	0	2629.94	570.24	2774.54	4553.37	5841.62	584.74	2306.34	4491.73	1063.20	807.27	709.88	1597.90	1774.34	683.70	1679.23	533.82	611.47	601.99	1225.26	1547.75	495.80	1844.93	1335.26	669.03	734.54	1063.47	1375.72	1776.13	1189.76
20	E3_Da	NovelBoundary	1	2.54	24.53	4.81	19.20	0.00	5.37	0.00	2.34	19.82	24.85	11.99	11.08	1.62	30.31	25.91	17.44	29.17	14.64	8.09	0.00	26.35	2.48	8.96	21.53	19.51	20.26	15.56	93.01	13.96
21	E3a_E4a	KnownJunction	0	2737.51	651.70	2996.44	8503.45	7329.52	632.95	2679.31	4796.93	1491.05	926.98	536.87	1301.87	1781.79	745.68	2185.74	683.36	557.08	690.18	1335.03	1538.04	488.79	1968.27	1237.05	654.68	747.40	861.50	402.55	1036.43	1116.71
22	I3	Intron	1	14.19	19.53	11.31	20.20	9.63	10.65	6.53	14.27	27.46	26.45	12.41	18.69	12.59	26.40	23.18	24.64	29.65	30.67	25.20	13.04	19.89	15.49	34.90	31.82	32.82	46.94	14.19	108.61	27.81
23	I3_AR1	ActiveIntronRegion	1	8.19	0.00	0.00	4.44	4.00	1.15	0.00	2.66	2.74	4.43	0.00	2.78	0.00	7.46	7.71	0.00	0.97	8.05	8.01	7.69	6.94	1.51	4.30	1.59	5.53	12.44	0.00	26.91	6.95
24	I3_SR1	SilentIntronRegion	0	2.62	0.00	0.00	5.28	0.28	0.00	0.00	1.43	1.81	1.36	0.00	1.10	0.00	2.87	0.00	0.00	0.83	5.46	0.00	5.00	0.71	0.00	0.80	0.72	1.35	6.64	0.00	10.05	3.06
25	I3_AR2	ActiveIntronRegion	1	16.34	25.16	14.57	24.72	11.52	13.46	8.41	17.71	34.67	33.02	15.98	23.40	16.22	32.21	28.18	31.73	37.93	37.39	30.71	14.80	24.08	19.63	43.98	40.60	40.98	57.33	18.28	133.40	34.12
26	E4_Aa	NovelBoundary	1	40.99	3.97	23.12	10.78	14.74	17.92	9.96	29.91	49.42	31.52	19.14	40.57	34.33	48.23	45.84	35.27	75.34	65.76	16.18	25.97	34.17	24.45	76.24	54.67	30.08	89.99	17.15	186.74	50.71
27	ER4a	ExonRegion	0	1551.10	377.95	612.62	2047.82	1735.51	317.10	1234.95	2247.31	784.38	478.08	419.10	821.79	906.81	458.11	1349.49	371.94	322.39	465.98	937.75	962.29	288.13	1154.53	787.57	373.06	415.03	519.13	372.62	724.95	501.21
28	ER4b	ExonRegion	0	59.71	26.75	32.06	114.91	76.86	9.23	44.06	79.43	43.01	24.34	21.25	47.71	18.56	19.57	77.61	16.63	15.17	30.80	68.53	53.40	8.15	40.95	37.72	27.96	27.57	26.04	16.22	45.18	16.11
29	IG19	Intergenic	0	27.59	15.02	26.29	38.90	20.05	38.45	9.96	34.46	27.03	42.89	35.85	35.53	20.45	51.45	34.86	43.69	59.72	43.99	30.01	35.28	58.16	31.48	58.50	51.19	47.64	76.98	44.86	137.69	43.89
30	IG19_AR1	ActiveIntergenicRegion	0	27.66	15.06	26.36	39.00	20.10	38.55	9.98	34.55	27.10	43.00	35.95	35.63	20.51	51.59	34.95	43.80	59.88	44.11	30.08	35.37	58.31	31.56	58.65	51.32	47.77	77.19	44.98	138.05	44.01