Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SCFD2	Gene	0	99.42	92.03	79.93	129.17	108.36	56.74	33.37	51.59	69.11	93.41	113.89	146.12	106.85	108.30	38.56	73.61	82.84	72.23	95.86	28.36	56.39	138.69	133.87	71.06	135.36	177.39	171.18	237.26	101.63
2	401642	Transcript	0	85.47	105.01	95.50	184.83	168.46	76.21	40.59	62.15	135.28	119.52	171.77	203.72	165.20	134.88	62.30	88.66	124.51	61.65	114.25	29.77	57.63	129.08	158.62	113.96	177.84	224.79	291.49	301.86	134.70
3	388940	Transcript	0	0.00	4.07	1.17	0.00	7.37	1.73	0.00	4.18	3.11	1.88	0.00	0.00	10.13	1.09	7.57	6.58	2.12	0.00	0.00	0.00	0.00	4.33	6.89	3.05	5.08	4.25	24.60	1.93	0.00
4	IG23_AR4	ActiveIntergenicRegion	0	0.00	0.00	1.63	0.00	4.98	0.75	2.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.33	0.00	0.00	0.86	0.00	0.00	0.00
5	IG23_AR1	ActiveIntergenicRegion	0	22.64	8.47	18.17	102.38	103.17	19.90	7.91	7.21	8.28	23.53	20.46	36.48	29.15	20.64	8.62	38.52	5.86	28.87	29.89	4.16	13.34	39.70	56.18	5.19	34.90	62.56	34.22	78.19	25.66
6	ER1a	ExonRegion	0	83.00	52.62	59.70	69.16	67.52	36.81	21.45	34.82	23.17	62.05	70.87	110.67	57.79	81.78	16.81	58.85	63.47	70.61	56.35	23.77	36.46	109.59	101.69	36.51	86.84	135.23	86.75	182.34	58.06
7	E1a_E2a	KnownJunction	0	139.15	130.59	88.07	78.30	128.21	53.29	43.83	77.83	66.75	109.97	154.00	174.42	98.69	139.50	24.32	80.48	119.41	90.80	129.48	36.80	75.49	158.78	139.52	65.68	139.95	230.15	158.29	270.62	122.12
8	ER2a	ExonRegion	0	142.42	108.79	96.25	152.14	153.43	71.61	42.19	68.02	73.24	115.74	155.68	178.10	104.70	134.50	34.90	89.71	107.34	83.76	109.83	37.57	72.38	164.36	170.22	82.67	167.72	214.41	201.33	288.55	117.75
9	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
10	E2a_E3a	KnownJunction	0	152.95	98.11	102.52	112.59	131.46	49.88	49.49	69.42	79.39	93.47	117.46	147.11	109.70	111.54	80.13	81.85	107.44	75.00	56.65	57.81	64.54	146.53	131.20	73.69	132.75	233.71	182.59	260.92	111.65
11	ER3a	ExonRegion	0	128.04	103.71	100.21	144.65	91.73	58.97	40.19	51.95	75.08	90.08	113.21	173.66	116.47	126.92	40.74	77.82	111.36	82.79	110.71	22.79	53.20	160.32	134.84	66.18	128.93	219.12	188.33	252.13	118.35
12	E3_Da	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E3a_E4a	KnownJunction	0	140.92	102.86	82.94	141.06	109.35	52.56	41.31	46.28	96.14	88.16	109.14	165.12	112.00	118.14	43.45	88.51	115.00	107.88	121.39	24.31	70.35	174.34	130.36	83.62	128.62	235.34	223.34	297.67	139.35
14	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	1.71	0.00
15	ER4a	ExonRegion	0	136.79	108.22	93.80	173.84	140.45	63.54	41.03	61.44	74.55	114.76	128.17	161.34	134.55	124.64	49.42	77.17	86.55	86.82	133.56	34.32	67.61	175.87	147.73	74.86	159.83	214.16	188.36	258.90	123.55
16	E4_Da	NovelBoundary	0	5.19	4.36	0.00	0.00	0.00	1.80	0.00	2.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	8.09	0.00	2.05	0.00	2.12	3.05	3.41	2.19	0.00	0.00	0.00
17	E4a_E5a	KnownJunction	0	92.43	102.77	98.81	278.24	147.96	46.65	37.88	36.23	64.80	86.80	148.43	165.90	128.14	101.90	70.16	92.33	82.52	103.26	121.39	7.77	70.51	97.57	142.97	86.01	141.61	173.76	257.43	230.72	144.20
18	I4_AR2	ActiveIntronRegion	0	1.11	1.03	0.00	0.00	0.00	0.44	0.30	0.00	0.23	1.66	1.15	1.86	0.01	0.13	0.00	0.80	3.77	0.18	1.95	0.00	0.64	0.49	0.85	0.34	0.35	1.31	0.00	3.12	0.22
19	I4_SR1	SilentIntronRegion	0	1.55	2.59	0.00	0.58	0.39	0.71	0.32	0.00	2.57	0.93	0.00	0.46	0.60	0.07	1.48	0.00	0.24	0.77	0.77	0.89	2.29	0.29	0.00	0.00	0.11	0.00	1.33	0.92	0.65
20	I4_AR1	ActiveIntronRegion	0	1.12	0.84	0.44	1.88	0.64	1.01	1.05	0.24	3.08	0.76	0.16	0.30	1.31	0.59	0.60	0.97	0.00	0.00	0.00	0.00	3.55	0.00	0.00	0.00	0.75	0.00	0.00	1.71	0.00
21	I4_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	0.58	0.00	2.76	0.00	1.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	I4_AR5	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.32	0.00	0.00	1.81	0.42	0.00	0.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.82	1.34
23	I4_AR6	ActiveIntronRegion	0	0.00	2.87	0.00	0.00	0.00	0.00	0.00	0.00	1.12	0.00	0.00	1.24	1.30	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.54	0.00	0.00	0.00	1.63	2.18
24	I4_AR7	ActiveIntronRegion	0	0.00	3.28	0.00	0.00	0.00	0.00	0.00	0.00	1.12	0.00	0.00	1.01	1.30	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	1.63	1.34
25	I4_AR8	ActiveIntronRegion	0	1.67	1.82	0.00	0.00	0.00	0.48	0.00	0.00	0.42	0.00	0.00	0.00	0.48	0.00	1.66	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.50	0.00	0.00	0.45	0.82
26	ER5a	ExonRegion	0	105.95	122.79	102.39	192.70	146.56	78.03	39.32	60.29	89.17	115.29	143.63	160.07	148.32	120.97	56.75	89.62	80.72	76.27	126.51	36.40	82.74	168.66	155.47	97.15	179.50	181.50	264.39	255.64	140.88
27	E5_Da	NovelBoundary	0	14.22	4.56	2.92	0.00	14.74	3.80	0.00	0.00	0.00	0.00	1.61	1.30	0.00	1.20	0.00	3.29	0.00	4.62	0.00	0.00	5.37	4.62	2.17	2.51	1.93	0.00	0.00	2.29	5.05
28	E5a_E6a	KnownJunction	0	81.46	64.08	93.28	174.49	149.14	104.01	36.05	30.26	74.33	93.71	101.58	156.95	140.82	93.06	71.56	82.77	60.19	38.02	40.46	42.18	55.99	140.80	136.52	101.39	123.51	163.50	159.98	187.27	91.08
29	I5_SR1	SilentIntronRegion	0	5.03	1.59	1.41	2.22	0.38	0.85	1.25	0.28	0.72	0.90	0.55	0.76	0.60	1.59	1.56	1.73	0.93	3.36	10.41	1.49	3.42	0.70	0.56	0.92	0.66	0.73	0.42	0.82	0.00
30	I5_AR1	ActiveIntronRegion	0	4.09	2.86	0.66	2.74	0.00	2.10	1.90	0.70	0.21	1.65	0.46	0.41	0.19	1.39	2.51	2.85	2.71	1.34	7.61	2.77	3.38	0.52	0.17	0.71	0.41	1.05	1.05	1.95	0.77
31	I5_SR3	SilentIntronRegion	0	0.21	2.12	0.00	0.00	0.00	0.00	0.29	0.00	2.01	0.42	0.00	0.18	0.00	0.13	0.00	0.24	0.09	0.44	0.00	0.00	0.54	0.00	0.00	0.00	0.00	0.08	0.54	0.85	0.23
32	I5_AR12	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.57	0.48	0.24	0.00	1.31	0.85	0.28	1.09	0.00	0.42	0.00	0.00	0.63	0.90	1.77	0.32	1.84	0.42	0.00	0.00	0.34	0.00	0.00	0.19	0.00
33	I5_AR26	ActiveIntronRegion	0	0.61	0.00	0.24	0.00	0.00	0.00	0.00	0.00	0.32	0.00	0.00	0.00	0.28	0.32	0.00	0.35	0.00	0.00	0.46	0.00	0.00	0.00	0.00	80.01	0.00	1.67	0.00	0.00	0.00
34	I5_SR22	SilentIntronRegion	0	0.00	0.58	0.23	0.00	0.00	0.00	0.36	0.00	0.15	0.13	0.48	0.36	0.00	0.41	0.00	0.67	0.40	0.43	1.00	0.00	0.07	0.08	0.16	98.23	0.19	0.04	0.00	0.00	0.00
35	I5_AR27	ActiveIntronRegion	0	0.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.24	0.00	0.00	0.00	0.09	0.19	1.09	0.35	0.09	0.00	0.00	0.00	0.19	0.05	0.00	118.79	0.00	0.11	0.00	0.23	0.00
36	I5_AR28	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.68	0.00	0.00	47.65	0.00	0.00	0.00	0.00	0.49
37	ER6a	ExonRegion	0	84.61	137.85	91.43	236.16	130.48	75.40	46.82	66.34	99.23	124.75	168.33	161.57	140.20	128.60	50.56	94.50	75.44	61.46	142.97	35.13	73.37	141.27	161.84	115.43	205.15	168.09	268.86	219.26	127.41
38	E6a_E7a	KnownJunction	0	75.15	67.87	77.96	208.57	137.20	70.44	37.99	56.24	98.24	93.35	132.64	158.22	134.06	131.37	74.74	92.64	104.40	52.27	153.76	19.60	44.08	99.28	136.72	122.44	157.91	153.42	313.94	209.34	143.51
39	E6a_E8a	KnownJunction	0	0.00	4.07	1.17	0.00	7.37	1.73	0.00	4.18	3.11	1.88	0.00	0.00	10.13	1.09	7.57	6.58	2.12	0.00	0.00	0.00	0.00	4.33	6.89	3.05	5.08	4.25	24.60	1.93	0.00
40	ER7a	ExonRegion	0	96.74	119.96	119.47	191.05	183.80	91.21	48.20	65.16	132.58	135.22	194.47	204.79	168.96	147.94	63.31	94.78	111.01	68.73	132.36	27.96	77.62	127.42	177.41	120.32	193.30	237.13	310.25	327.46	142.64
41	E7a_E8a	KnownJunction	0	84.53	127.20	89.07	154.87	184.36	66.99	35.59	65.04	175.01	129.98	188.19	248.16	192.56	125.32	48.83	78.56	158.13	63.96	56.65	41.76	51.18	160.53	161.74	99.11	182.30	283.83	250.28	368.80	117.96
42	E7a_E9a	NovelJunction	0	0.00	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	I7_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	2.63	0.97	0.00	0.00	1.04	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.56	0.89	1.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	I7_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.71	1.51	0.97	0.00	0.72	0.00	0.20	0.00	0.00	1.67	0.00	0.00	0.00	0.75	0.00	1.07	2.15	0.00	1.86	0.00	2.62	0.00
45	E8_Aa	NovelBoundary	0	0.00	0.00	2.72	0.00	0.00	0.00	0.00	1.89	4.32	0.00	1.61	0.00	0.00	1.91	0.00	0.00	3.89	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00
46	ER8a	ExonRegion	0	112.85	141.42	76.29	120.78	107.48	78.67	43.51	77.29	186.23	128.87	131.45	200.95	193.24	131.83	78.88	77.82	135.83	57.27	121.74	24.55	77.61	173.45	174.69	126.29	190.66	253.84	222.01	387.50	185.19
47	E8_Da	NovelBoundary	0	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.36	0.00
48	E8a_E9a	KnownJunction	0	133.90	175.48	80.13	89.30	193.35	71.94	33.13	94.75	285.43	103.30	132.68	194.85	211.57	131.85	57.20	82.39	113.54	55.48	89.02	61.03	96.75	347.95	171.68	175.44	180.98	288.25	239.99	347.77	192.73
49	E9_Aa	NovelBoundary	0	5.90	4.85	1.02	0.00	0.00	0.00	0.00	0.00	3.99	0.00	0.00	1.30	0.00	0.00	0.00	0.00	3.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.88	0.00	0.00	0.00
50	ER9a	ExonRegion	0	51.49	111.02	47.16	104.50	110.77	28.41	29.22	54.22	112.50	85.17	94.48	123.09	121.70	89.24	62.03	52.74	74.58	54.20	91.88	22.55	34.42	141.06	112.33	78.16	92.68	181.23	149.67	231.62	87.17
51	IG22_AR2	ActiveIntergenicRegion	0	14.68	39.14	13.40	27.61	39.52	15.78	9.88	18.62	47.49	27.44	27.50	37.08	26.33	23.81	40.13	24.43	20.02	16.07	47.35	11.50	15.98	31.13	30.88	31.04	38.42	35.64	50.30	68.42	29.36