Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	STX18	Gene	0	122.12	142.55	123.33	218.16	167.19	145.38	121.12	76.86	151.52	168.69	167.47	93.11	145.89	108.02	110.01	92.64	113.94	61.49	86.57	146.64	103.44	167.72	120.89	146.96	169.83	96.42	128.01	137.14	77.57
2	306200	Transcript	0	171.12	211.17	175.65	313.24	227.08	255.08	164.29	88.92	155.70	270.70	286.15	123.40	187.67	153.93	128.11	138.91	140.98	85.03	142.76	199.04	174.56	200.82	179.11	198.33	262.02	130.52	212.73	181.48	97.45
3	IG20_AR2	ActiveIntergenicRegion	0	1.52	0.00	0.00	4.88	17.02	0.00	1.43	0.77	1.59	2.05	2.08	0.00	1.84	0.00	0.00	1.76	0.00	2.73	2.26	1.41	0.97	2.30	0.00	0.00	0.00	0.00	0.00	1.04	0.95
4	IG20_SR1	SilentIntergenicRegion	0	0.00	0.00	0.00	2.44	4.15	0.00	0.00	1.84	0.00	0.00	3.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.48	1.80	0.00	0.00	0.00	0.00	0.00	1.36	0.00
5	ER1a	ExonRegion	0	31.34	29.07	16.85	55.79	58.77	26.89	23.68	23.47	22.38	34.10	24.93	24.40	48.82	24.81	17.31	24.23	41.46	33.99	18.10	53.52	21.51	53.48	27.05	21.34	27.08	28.86	11.94	30.35	27.63
6	E1a_E2a	KnownJunction	0	160.68	162.30	26.83	84.77	30.51	169.89	133.14	85.90	107.98	206.52	147.77	63.43	134.80	85.06	95.08	133.95	97.56	103.13	89.02	219.65	134.25	148.96	136.52	86.43	161.05	171.74	41.10	102.76	85.17
7	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	I1_AR6	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.21	3.06	0.00	0.00	0.00	3.10	0.00	0.52	1.27	0.00	0.00	0.00	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00
9	E2_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	0	119.40	155.02	28.04	112.16	73.11	167.73	140.48	51.36	107.35	215.93	205.07	94.71	157.60	98.84	73.88	110.31	117.72	114.67	117.94	125.90	114.17	123.89	175.03	101.36	196.11	163.36	81.56	150.37	90.14
11	E2a_E3a	KnownJunction	0	100.39	94.62	33.06	191.53	144.42	112.65	68.89	46.28	91.78	137.21	170.67	98.82	143.04	94.94	60.19	81.32	133.55	65.37	177.81	76.25	58.92	104.33	110.66	102.88	157.60	63.21	138.85	115.29	76.89
12	ER3a	ExonRegion	0	144.44	139.04	219.17	301.08	261.45	146.51	98.09	63.53	81.50	184.88	196.80	97.08	133.55	139.73	74.88	96.84	117.87	56.42	90.87	163.43	101.72	172.52	116.93	152.42	203.30	83.73	174.01	157.20	73.21
13	E3_Da	NovelBoundary	0	2.24	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E3a_E4a	KnownJunction	0	136.14	222.21	341.93	571.58	446.39	211.83	124.90	52.20	154.61	282.54	284.74	138.76	180.21	168.83	142.71	150.78	127.79	88.87	105.20	213.94	102.68	167.83	157.35	197.93	273.00	146.34	221.70	188.58	114.33
15	ER4a	ExonRegion	0	193.19	237.61	205.24	406.51	305.66	274.19	173.10	59.10	157.54	359.11	298.81	136.36	181.33	186.46	110.00	173.84	120.14	110.67	183.35	220.53	181.63	191.46	181.87	234.89	313.63	118.90	192.38	164.17	83.87
16	E4_Da	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	7.94	0.00	4.68	3.99	7.99	4.46	1.23	0.00	3.10	0.00	3.82	0.00	5.39	0.00	0.00	7.62	0.00	0.00	0.00	5.23	0.00	0.00	1.98	3.24
17	E4a_E5a	KnownJunction	0	190.70	225.51	113.01	339.07	208.97	345.12	170.61	67.53	170.63	329.83	301.86	125.06	177.28	201.94	149.69	164.93	128.75	94.01	210.40	259.34	240.18	196.85	198.23	237.71	343.28	112.13	268.61	164.22	67.71
18	E4a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.22	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I4	Intron	0	1.99	2.99	0.00	4.43	7.55	2.55	4.37	0.00	1.21	3.57	0.37	0.95	0.40	0.98	6.79	7.67	2.77	1.19	2.96	5.96	3.09	0.00	0.56	1.99	0.44	0.00	0.00	0.00	0.00
20	I4_AR1	ActiveIntronRegion	0	2.01	3.02	0.00	4.49	7.64	2.58	4.43	0.00	1.22	3.61	0.37	0.96	0.41	0.99	6.87	7.76	2.80	1.21	2.97	6.04	3.12	0.00	0.57	2.02	0.45	0.00	0.00	0.00	0.00
21	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	20.28	7.37	3.68	0.00	0.00	5.15	1.68	1.52	2.95	0.00	0.95	27.51	3.29	2.32	4.62	0.00	3.89	5.46	0.00	0.00	0.00	8.56	0.00	12.42	2.29	0.00
22	ER5a	ExonRegion	0	175.67	280.98	84.64	318.37	157.70	286.20	179.76	63.86	154.81	353.96	372.15	138.33	171.82	196.90	137.26	174.88	130.91	104.32	162.73	260.39	213.81	206.78	220.18	239.03	377.64	105.42	256.96	180.35	92.01
23	E5_Da	NovelBoundary	0	5.31	0.00	0.00	10.78	0.00	1.88	0.00	0.00	0.00	4.07	2.72	3.34	0.00	0.00	0.00	7.34	1.87	0.00	0.00	0.00	3.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E5a_E6a	KnownJunction	0	187.28	382.57	84.26	328.71	134.55	366.33	160.49	64.84	196.91	354.12	348.23	132.17	221.35	177.98	133.34	213.89	130.31	110.84	242.77	254.88	227.91	198.02	202.86	294.11	391.92	130.50	261.41	178.24	116.37
25	I5_SR2	SilentIntronRegion	0	1.32	0.37	0.86	0.00	0.00	0.00	0.66	1.14	2.66	0.82	0.00	0.76	0.00	0.94	0.00	1.03	1.21	0.67	0.00	0.00	5.75	0.41	0.00	2.19	0.38	0.87	0.00	0.76	0.00
26	I5_SR3	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.05	0.00	0.00	1.00	0.00	0.00	0.00	1.43	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	I5_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.11	0.00	0.00	0.00	1.37	1.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	I5_AR5	ActiveIntronRegion	0	0.00	6.57	1.12	0.00	0.00	1.77	0.00	0.00	2.89	5.57	1.19	1.24	0.00	0.91	0.00	7.59	0.29	0.00	0.00	2.81	4.28	0.00	1.81	0.00	0.00	0.00	0.00	3.26	1.34
29	I5_AR6	ActiveIntronRegion	0	1.19	1.68	0.22	0.00	1.37	0.97	0.00	0.00	3.64	1.66	1.59	1.72	0.36	1.20	0.00	2.04	1.23	0.00	0.00	1.11	1.23	0.00	0.59	3.01	1.20	0.44	0.00	1.51	0.95
30	E6_Aa	NovelBoundary	0	5.43	4.85	1.54	0.00	0.00	1.46	0.00	0.00	3.56	0.00	1.33	0.00	0.00	1.04	0.00	2.91	2.50	0.00	8.09	0.00	6.02	0.00	2.36	5.92	3.86	0.00	0.00	8.63	4.09
31	ER6a	ExonRegion	0	180.44	270.72	211.34	332.98	239.80	337.43	175.89	71.41	155.45	363.39	379.71	121.93	200.03	187.61	140.11	177.19	126.52	91.87	190.47	239.92	218.68	189.10	214.47	243.58	328.34	126.84	297.32	190.46	94.90
32	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
33	E6a_E7a	KnownJunction	0	159.14	206.02	264.45	273.50	226.51	270.91	178.91	53.15	119.53	273.43	376.96	99.55	136.99	168.79	79.73	142.06	108.36	62.67	169.94	202.28	186.67	165.83	225.56	184.95	243.64	102.05	280.59	194.42	74.05
34	E6a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.87	0.00
35	I6_AR1	ActiveIntronRegion	0	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	1.12	0.75	0.00	0.64	3.49	0.00	0.00	0.00	1.87	1.79	0.31	0.00	1.62	1.80	0.00	0.15	0.00	0.00	0.00	0.90	0.00
36	I6_AR2	ActiveIntronRegion	0	0.00	2.11	0.19	0.00	0.80	0.26	0.33	0.00	1.35	1.95	1.27	1.44	1.14	0.67	0.00	0.00	2.06	0.56	1.05	0.00	2.13	0.18	0.59	1.58	0.12	0.39	1.80	1.20	0.52
37	E7_Aa	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.52	0.00	0.00	1.21	0.00	0.00	0.00	1.33	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER7a	ExonRegion	0	197.32	292.87	255.93	352.16	262.34	403.15	208.55	105.11	155.27	385.37	442.80	154.04	224.38	179.34	132.65	174.11	143.29	119.16	191.46	213.80	243.77	231.30	226.13	261.71	332.87	144.15	313.83	212.51	119.54
39	E7_Da	NovelBoundary	0	5.60	8.53	1.37	0.00	0.00	1.61	0.00	0.00	1.55	3.75	0.00	0.00	0.00	1.64	0.00	0.00	0.99	4.62	0.00	0.00	5.90	0.00	0.00	0.00	1.67	1.63	0.00	0.00	0.00
40	E7a_E8a	KnownJunction	0	232.34	310.92	207.64	437.21	326.28	413.68	189.15	108.04	191.64	360.83	345.54	147.11	245.87	166.93	150.69	160.04	155.76	75.26	161.62	199.55	329.35	228.65	184.64	288.61	299.14	114.28	341.02	145.22	118.88
41	E7a_E9a	NovelJunction	0	13.51	0.00	1.20	0.00	0.00	3.91	0.00	4.28	3.32	5.91	1.61	1.87	0.00	2.24	17.74	7.34	5.69	0.00	0.00	12.07	3.45	4.04	2.51	8.19	3.45	0.00	0.00	0.00	1.39
42	E7a_E10a	NovelJunction	0	0.00	0.00	0.00	10.78	0.00	0.00	0.00	0.00	0.00	5.47	0.00	0.00	0.00	0.84	9.17	0.00	0.00	0.00	0.00	8.27	1.85	0.00	0.00	0.00	0.00	0.00	9.34	2.29	0.00
43	I7	Intron	0	5.88	2.72	2.31	1.95	2.25	4.23	1.04	1.21	2.60	4.83	2.93	2.59	0.97	4.16	2.55	4.10	6.91	3.13	3.27	1.98	3.67	0.32	0.78	1.65	2.13	2.24	1.09	3.36	1.02
44	I7_SR1	SilentIntronRegion	0	2.97	3.18	1.72	0.84	1.93	4.08	1.67	0.44	2.15	3.65	2.54	2.12	0.77	4.14	2.54	2.42	6.43	2.15	3.54	1.43	4.62	0.00	0.57	1.19	0.79	2.73	2.10	1.87	1.24
45	I7_AR1	ActiveIntronRegion	0	3.57	0.00	1.70	0.00	0.00	1.96	0.80	0.60	1.40	2.87	0.47	3.34	1.20	2.29	0.61	3.61	2.75	3.61	0.84	1.82	0.75	0.24	0.72	1.05	1.32	2.03	0.00	3.02	0.71
46	I7_SR2	SilentIntronRegion	0	2.91	1.75	1.75	0.24	1.25	2.85	0.21	0.47	1.14	3.72	2.45	1.06	0.20	2.72	1.09	2.27	3.02	1.57	2.93	1.36	2.23	0.18	0.59	0.46	1.26	1.19	0.19	1.93	0.48
47	I7_AR2	ActiveIntronRegion	0	5.16	3.64	1.61	1.23	4.46	3.27	1.44	0.00	2.02	3.81	3.18	2.73	0.00	1.94	2.79	4.81	4.43	2.71	2.54	3.70	4.20	0.03	0.07	0.26	1.53	0.94	0.00	2.19	0.89
48	I7_SR3	SilentIntronRegion	0	7.30	2.85	2.54	2.62	3.04	4.61	0.84	1.67	2.51	4.73	3.27	2.89	1.11	4.26	2.30	3.97	7.68	3.56	3.68	2.29	3.55	0.50	0.91	1.53	2.57	2.05	1.25	4.55	1.17
49	I7_AR3	ActiveIntronRegion	0	9.14	3.47	3.26	3.95	1.61	5.88	1.78	2.16	5.33	8.23	3.58	3.66	1.87	6.66	5.20	7.86	11.58	4.65	3.25	1.94	5.29	0.41	1.06	4.26	3.63	3.86	1.34	3.84	1.15
50	E8_Aa	NovelBoundary	0	5.13	0.00	2.34	0.00	6.78	17.00	12.02	0.00	6.73	13.38	22.05	5.99	1.72	10.55	8.37	17.14	10.53	4.62	0.00	7.28	17.13	2.48	2.51	11.60	3.86	10.86	9.24	18.65	3.63
51	ER8a	ExonRegion	0	196.47	225.71	194.29	409.26	257.77	313.98	184.53	94.99	141.56	283.98	368.01	146.27	225.06	162.72	109.45	121.39	164.62	63.51	105.09	204.85	238.42	262.47	210.83	241.18	301.49	130.90	261.82	208.76	105.05
52	E8_Da	NovelBoundary	0	21.18	8.63	7.87	20.92	0.00	16.80	2.75	5.08	6.18	18.97	2.53	7.95	3.85	5.52	7.77	24.48	41.55	0.00	8.09	4.13	13.16	0.00	2.51	7.78	7.05	1.67	34.09	14.38	3.00
53	E8a_E9a	KnownJunction	0	204.03	253.04	205.95	301.32	256.28	296.89	199.79	117.60	158.57	280.54	319.95	128.34	232.56	172.53	190.15	151.62	165.17	88.36	137.57	266.87	222.61	227.24	218.42	218.39	356.65	153.42	227.07	223.49	112.68
54	I8	Intron	0	10.95	5.17	7.25	6.73	2.05	8.14	2.35	2.44	8.61	6.39	4.77	6.18	2.01	9.28	8.69	11.50	23.22	8.30	4.24	4.22	6.50	0.88	1.29	9.32	6.89	6.50	1.72	5.96	2.99
55	I8_AR1	ActiveIntronRegion	0	14.08	2.35	5.66	0.16	6.04	9.74	2.25	1.03	6.10	7.91	7.13	4.71	2.41	9.48	5.20	11.70	16.71	4.92	0.89	6.47	7.74	0.82	0.54	4.20	6.24	6.13	0.33	7.10	4.82
56	I8_AR2	ActiveIntronRegion	0	17.76	3.28	7.85	7.31	4.98	4.91	0.00	0.00	3.37	2.89	2.38	6.01	2.41	9.59	38.40	5.06	22.90	0.00	0.00	0.00	5.91	1.80	1.81	0.00	1.43	0.67	1.83	1.63	0.58
57	I8_SR1	SilentIntronRegion	0	17.15	2.58	7.69	7.31	4.98	3.73	0.00	0.00	3.45	2.89	2.38	5.04	1.30	8.62	31.60	7.05	24.11	1.56	0.00	2.01	6.52	1.42	1.81	1.38	1.94	4.71	1.31	1.28	1.92
58	I8_AR3	ActiveIntronRegion	0	10.43	0.00	8.68	14.63	0.00	3.30	0.00	0.00	5.92	2.41	1.43	4.87	1.30	4.11	8.21	11.98	30.65	2.73	0.00	2.81	3.71	0.00	1.81	6.17	1.43	6.18	0.85	2.39	4.03
59	I8_AR4	ActiveIntronRegion	0	10.43	5.68	7.44	7.52	1.47	8.07	2.44	2.72	9.10	6.32	4.55	6.42	1.98	9.35	8.73	11.58	24.03	8.98	4.84	3.99	6.39	0.89	1.37	10.24	7.16	6.63	1.93	5.95	2.76
60	E9_Aa	NovelBoundary	1	14.27	0.00	11.76	0.00	5.60	12.51	2.23	2.14	21.83	14.22	0.00	12.05	0.00	10.83	17.34	18.90	32.71	0.00	8.09	6.95	9.59	0.00	0.00	20.64	6.86	1.63	0.00	18.65	3.07
61	ER9a	ExonRegion	0	225.86	219.38	269.02	380.57	300.17	339.80	267.58	144.21	211.64	353.44	430.73	173.53	251.82	207.66	177.78	167.10	193.55	103.94	183.62	253.96	219.44	311.41	251.89	256.94	297.63	219.53	342.73	325.64	137.07
62	E9a_E10a	KnownJunction	0	244.26	217.94	323.10	479.48	300.05	390.01	267.14	215.24	254.19	394.94	426.91	188.37	302.62	206.48	225.63	157.36	229.57	84.38	178.03	243.63	222.77	350.43	261.57	308.23	275.12	215.17	197.55	313.53	130.27
63	ER10a	ExonRegion	0	197.28	179.01	290.74	367.26	309.04	217.18	199.39	149.17	210.35	262.20	270.55	158.84	227.12	167.19	172.24	121.82	227.68	78.40	99.57	176.86	183.93	271.39	176.65	204.04	233.40	159.01	226.66	240.82	126.35
64	E10_Da	NovelBoundary	0	5.49	3.59	3.09	0.00	0.00	0.00	0.00	2.24	17.36	3.75	4.56	2.89	1.62	3.61	7.97	3.75	19.81	0.00	8.09	0.00	7.58	0.00	0.00	0.00	0.00	4.21	1.94	0.00	5.12
65	E10a_E11a	KnownJunction	0	213.76	215.23	218.73	356.32	329.82	179.56	200.77	149.65	247.61	160.14	202.27	143.13	210.27	152.46	198.12	147.49	192.50	88.36	121.39	203.03	137.38	254.32	171.24	160.01	264.89	166.38	250.48	206.64	127.60
66	I10	Intron	0	4.91	4.57	2.21	1.99	1.36	1.05	0.98	1.66	5.14	4.61	2.07	0.43	0.90	2.80	8.87	3.85	8.71	2.03	0.67	1.91	1.68	0.38	0.63	4.19	2.58	5.46	0.00	3.17	0.56
67	I10_AR1	ActiveIntronRegion	0	4.93	4.59	2.21	2.00	1.36	1.05	0.98	1.67	5.15	4.63	2.07	0.43	0.90	2.81	8.89	3.86	8.74	2.04	0.67	1.92	1.69	0.38	0.63	4.20	2.59	5.47	0.00	3.18	0.56
68	E11_Aa	NovelBoundary	0	8.32	0.00	1.52	0.00	7.37	1.76	2.92	0.00	4.39	10.47	0.00	1.30	0.00	7.25	26.11	3.29	17.08	0.00	0.00	0.00	0.00	1.90	2.46	13.22	3.79	0.00	2.53	0.00	0.00
69	ER11a	ExonRegion	0	103.47	114.77	94.34	178.47	139.14	86.66	105.21	80.64	178.39	108.18	94.68	81.16	134.47	85.29	119.44	71.98	107.61	47.32	60.99	127.27	66.02	161.07	93.28	129.13	124.69	85.00	79.82	118.06	72.66