Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C4orf34	Gene	0	104.50	387.20	140.78	89.02	90.37	117.46	312.70	1182.56	61.70	440.64	214.10	550.17	62.43	140.05	799.26	1192.73	814.08	48.93	53.74	112.42	143.99	108.21	239.96	249.57	431.85	508.49	908.06	367.47	754.19
2	295958	Transcript	0	144.45	317.91	163.06	81.43	86.50	83.65	463.97	1920.57	46.82	544.85	293.78	907.14	94.27	167.10	906.47	1421.46	1386.78	62.35	55.01	100.02	101.02	169.81	420.73	238.98	507.83	1005.52	1395.49	822.15	1376.66
3	IG39	Intergenic	0	0.00	3.34	15.25	14.86	21.26	0.85	15.88	1.53	0.70	9.28	0.74	4.73	0.27	0.47	2.28	11.11	11.45	2.40	1.99	1.55	1.48	3.74	4.50	0.00	4.15	13.03	1.52	1.35	1.80
4	IG39_AR2	ActiveIntergenicRegion	0	0.00	0.00	6.73	7.31	4.98	0.00	6.38	0.00	0.00	4.09	1.19	0.21	0.00	0.00	5.60	5.06	1.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.71	0.00	6.52	0.00
5	IG39_SR1	SilentIntergenicRegion	0	0.00	0.00	15.58	11.78	16.24	0.00	17.93	1.72	0.74	7.67	0.39	4.69	0.00	0.00	2.91	10.12	6.58	0.00	0.00	1.24	1.11	1.29	1.88	0.00	3.79	9.67	1.02	3.49	0.00
6	IG39_AR1	ActiveIntergenicRegion	0	0.00	8.74	26.64	27.23	41.76	2.24	26.01	2.59	1.22	17.26	1.29	8.51	0.70	1.23	2.98	19.49	24.19	6.27	5.15	3.05	2.96	8.71	10.23	0.00	7.75	25.51	3.14	0.00	4.71
7	ER1a	ExonRegion	1	15.47	31.58	21.98	61.71	33.55	19.55	59.76	14.72	7.99	31.95	5.31	21.56	16.02	12.86	21.35	60.44	105.53	22.75	5.81	18.79	8.18	33.45	19.82	9.60	15.19	36.70	5.88	7.98	30.35
8	E1a_E2a	KnownJunction	1	50.43	38.39	47.96	71.39	20.93	25.21	84.16	39.51	11.05	72.54	18.66	25.27	29.14	17.57	25.51	94.86	126.01	18.49	24.28	20.43	13.84	79.05	25.07	29.91	35.46	60.64	16.05	10.15	19.68
9	I1	Intron	0	0.17	1.12	0.22	0.14	0.24	0.48	0.49	0.78	0.62	3.60	0.38	0.91	0.20	0.29	1.25	1.58	4.75	0.14	0.17	0.16	0.97	0.18	0.23	0.84	1.08	0.81	1.85	0.64	1.06
10	I1_SR2	SilentIntronRegion	0	0.00	2.34	0.12	0.00	0.68	0.86	0.14	0.13	0.90	3.61	0.08	0.90	0.22	0.00	1.66	0.69	4.35	0.13	0.00	0.14	0.30	0.00	0.00	1.35	1.29	0.22	0.64	0.57	0.46
11	I1_SR3	SilentIntronRegion	0	0.14	2.21	0.26	0.00	0.00	0.64	0.72	1.11	0.98	4.58	0.61	1.29	0.49	0.64	2.58	2.54	7.79	0.18	0.07	0.18	1.88	0.08	0.56	1.25	1.62	1.09	3.18	1.13	1.38
12	I1_AR3	ActiveIntronRegion	0	0.61	0.00	0.24	0.00	0.00	1.97	0.58	0.53	0.72	6.17	1.19	1.86	0.00	0.42	2.77	1.42	5.56	0.28	0.92	0.00	2.42	0.00	1.04	1.54	0.82	0.45	1.57	1.17	2.10
13	I1_SR4	SilentIntronRegion	0	0.23	0.77	0.15	0.22	0.38	0.23	0.44	0.26	0.47	3.32	0.49	1.27	0.02	0.18	0.93	1.62	4.73	0.06	0.05	0.13	1.04	0.03	0.14	0.86	0.93	0.56	3.33	0.60	1.38
14	I1_AR4	ActiveIntronRegion	0	0.00	1.03	0.43	0.00	0.00	0.00	0.52	0.16	1.32	4.33	0.63	1.38	0.00	0.23	0.47	0.64	3.14	0.03	0.00	0.47	1.37	0.00	0.31	0.92	0.86	1.35	1.26	0.56	0.77
15	I1_AR5	ActiveIntronRegion	0	5.26	6.80	3.37	0.00	3.44	0.48	6.35	34.57	0.40	18.39	1.67	5.40	0.46	3.50	3.55	28.99	23.81	1.43	0.00	3.41	3.51	4.38	1.91	5.30	21.85	17.13	10.71	5.53	21.27
16	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.07	0.00	0.00	0.00	0.00	7.97	0.00	4.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.64	0.00	0.00	0.00	1.29
17	ER2a	ExonRegion	0	236.58	518.81	153.45	81.17	87.45	125.57	561.66	3733.74	42.91	636.81	311.22	899.13	104.41	217.79	1193.95	2419.03	1464.53	71.50	41.56	140.87	195.84	270.08	374.26	319.03	855.34	1328.97	684.06	728.75	1605.88
18	E2_Da	NovelBoundary	0	2.71	18.42	4.88	0.00	0.00	1.96	39.08	16.57	1.31	38.39	9.30	23.64	0.00	1.20	7.97	103.96	56.93	4.62	0.00	0.00	1.52	2.48	10.54	7.00	25.65	68.32	63.86	45.29	45.86
19	E2a_E3a	KnownJunction	0	61.46	283.48	135.09	28.90	103.16	73.24	1139.89	1500.14	59.53	984.42	648.51	1871.95	138.17	210.44	1608.31	2630.87	2612.38	64.73	32.37	71.45	77.93	89.89	786.42	106.05	577.29	2113.52	1327.07	1694.50	3088.05
20	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.57	13.33	0.00	0.00	5.23	1.33	13.86	1.43	0.97	7.97	15.99	0.86	0.00	0.00	0.00	0.00	0.00	6.35	3.05	0.00	0.00	4.52	2.29	4.62
21	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.58	0.00	0.00	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	4.27	0.00	0.00
22	I2_SR1	SilentIntronRegion	0	0.26	3.02	0.51	0.22	0.69	0.63	1.33	1.08	1.10	4.96	0.93	1.80	0.39	0.56	3.59	4.20	8.28	0.51	0.97	0.47	2.21	0.40	0.46	2.24	2.00	1.40	4.54	2.08	1.81
23	E3_Aa	NovelBoundary	0	0.00	4.65	0.00	0.00	0.00	0.00	0.00	0.00	1.46	5.55	6.71	9.07	0.00	0.00	0.00	0.00	22.76	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	3.65	1.99	5.93	1.58
24	I2_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	1.63	0.00
25	ER3a	ExonRegion	1	109.27	257.97	115.14	17.46	51.14	65.09	542.40	1644.16	43.13	639.77	478.25	1771.12	139.50	204.20	926.50	1365.51	2569.91	55.53	58.19	84.95	64.36	139.58	789.84	203.92	418.24	1774.53	2896.21	1662.64	2758.62
26	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	13.55	0.00	0.00	0.00	0.00	2.33	3.89	2.69	1.93	0.00	0.00	3.77	2.71
27	E3a_E4a	KnownJunction	1	219.19	350.86	130.35	8.20	74.13	79.92	483.87	2613.46	50.58	713.03	330.74	1213.50	122.54	209.03	1251.13	1551.93	2044.31	107.75	72.83	125.95	120.61	251.79	709.00	361.52	634.58	1385.01	4159.33	1589.90	1719.90
28	E3a_E5a	NovelJunction	1	0.00	13.48	0.00	0.00	0.00	3.30	2.57	93.71	0.00	21.97	4.65	34.70	4.01	2.42	33.09	14.23	34.78	9.25	0.00	4.13	6.86	6.61	9.11	15.49	9.02	55.66	106.50	38.91	42.65
29	I3_SR1	SilentIntronRegion	0	0.11	1.63	0.35	0.37	0.00	0.00	0.11	0.19	0.73	2.59	0.28	2.28	0.00	0.18	2.30	2.62	6.61	0.20	0.33	0.03	0.67	0.09	0.19	1.57	0.82	0.49	3.28	0.95	1.77
30	I3_AR1	ActiveIntronRegion	0	0.00	2.33	0.81	0.00	0.00	1.56	0.65	0.30	0.18	6.42	0.08	6.24	0.00	0.32	0.75	4.35	14.24	0.62	0.00	0.37	1.69	0.00	0.00	2.70	1.41	1.02	1.36	3.42	1.45
31	I3_AR2	ActiveIntronRegion	0	0.70	2.63	0.00	0.00	0.00	0.00	1.95	0.00	0.00	4.33	0.00	3.03	0.00	0.00	5.25	11.24	15.80	0.00	1.33	1.48	4.19	0.00	0.00	2.11	1.43	0.33	5.76	3.53	3.45
32	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.92	0.00	0.00	3.99	0.00	3.34	0.00	0.97	0.00	0.00	10.31	0.00	0.00	0.00	3.53	0.00	0.00	0.00	0.00	0.00	0.00	4.40	0.00
33	ER4a	ExonRegion	0	254.13	509.00	526.02	165.99	153.31	120.65	476.92	3552.23	64.90	659.90	331.34	925.48	113.90	255.37	1090.00	1558.63	1544.07	75.71	72.10	147.67	141.78	289.95	404.23	427.07	910.39	946.22	1425.97	732.16	1249.74
34	E4_Da	NovelBoundary	0	0.00	0.00	2.49	0.00	0.00	0.00	0.00	4.98	0.00	0.00	0.00	6.02	0.00	0.00	0.00	0.00	14.59	0.00	0.00	2.98	0.00	0.00	0.00	2.99	1.93	0.00	0.00	1.98	2.01
35	E4a_E5a	KnownJunction	0	266.97	460.13	226.35	210.95	162.85	112.99	532.78	3375.22	70.83	724.09	312.33	942.27	129.16	243.39	1218.64	1935.34	1322.51	97.86	129.48	171.44	126.91	293.41	463.00	438.99	732.09	1009.56	1142.40	685.88	1284.56
36	I4	Intron	0	0.23	1.32	0.44	0.38	0.00	0.58	0.53	1.80	0.87	3.43	0.72	2.56	0.14	0.48	3.28	2.68	5.76	0.15	0.00	0.00	0.90	0.29	0.29	2.27	1.06	1.83	2.66	1.42	2.30
37	I4_SR1	SilentIntronRegion	0	0.23	1.32	0.44	0.38	0.00	0.58	0.53	1.80	0.88	3.44	0.72	2.56	0.14	0.48	3.29	2.69	5.77	0.15	0.00	0.00	0.91	0.29	0.29	2.28	1.06	1.83	2.67	1.42	2.30
38	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.75	0.00	0.00	0.00	0.00	0.00	0.00	4.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.86	0.00	0.00
39	ER5a	ExonRegion	0	86.52	410.96	111.19	87.08	92.02	130.64	294.28	811.91	70.42	441.17	207.65	493.95	55.55	133.24	822.85	1176.51	691.78	46.86	58.50	118.60	159.72	81.09	214.98	254.72	391.84	394.53	902.43	287.38	633.15
40	IG38	Intergenic	0	8.09	68.01	16.56	18.28	21.98	36.90	43.77	59.79	19.94	77.16	35.39	80.53	9.86	19.87	84.50	170.59	150.20	10.09	12.28	14.29	40.46	8.53	24.87	56.14	58.41	77.12	168.38	46.04	85.92
41	IG38_AR7	ActiveIntergenicRegion	0	23.44	185.63	65.34	47.94	68.02	141.11	155.69	217.88	41.01	276.59	126.27	250.80	29.29	61.33	189.46	399.06	545.29	31.92	36.24	43.56	145.99	27.30	93.04	150.77	212.73	294.96	588.15	165.26	281.98
42	IG38_SR7	SilentIntergenicRegion	0	4.15	34.80	8.66	0.00	0.00	30.17	44.27	187.91	12.32	122.10	27.66	4.38	6.73	8.19	81.95	32.03	11.56	8.71	6.19	14.52	37.77	12.82	35.04	49.99	110.82	216.13	50.84	69.47	19.89
43	IG38_AR5	ActiveIntergenicRegion	0	10.80	137.27	18.00	19.73	30.79	50.40	63.14	82.82	44.82	116.49	54.80	144.92	17.43	33.72	190.48	387.87	234.42	14.11	22.07	23.25	58.41	12.95	34.24	110.14	84.88	104.11	276.39	67.34	151.68
44	IG38_SR5	SilentIntergenicRegion	0	0.89	1.85	0.80	1.38	3.33	0.54	2.12	2.07	1.68	2.72	0.85	4.09	0.47	1.55	4.92	6.62	3.75	0.66	0.46	0.67	2.06	0.17	0.73	3.56	2.14	1.82	6.85	2.43	1.22
45	IG38_AR4	ActiveIntergenicRegion	0	0.61	2.83	1.43	5.27	3.42	0.51	0.74	1.35	1.74	1.14	1.31	2.95	0.72	0.81	1.13	1.83	2.38	0.71	0.39	1.91	2.44	0.22	1.67	5.01	1.78	0.58	2.92	0.60	1.39
46	IG38_SR4	SilentIntergenicRegion	0	0.54	0.00	1.27	7.28	2.48	2.44	2.05	0.00	1.14	1.47	0.91	1.10	1.31	2.30	0.00	1.71	1.52	0.98	0.00	0.70	2.53	1.83	0.00	4.37	2.54	1.20	1.86	0.41	0.34
47	IG38_SR3	SilentIntergenicRegion	0	1.71	4.78	3.27	11.47	3.47	4.27	2.51	1.31	2.79	3.34	2.11	5.59	1.03	2.05	1.64	0.66	2.25	1.88	1.70	0.98	3.42	0.32	1.45	4.78	3.05	1.26	4.07	1.01	1.43
48	IG38_SR2	SilentIntergenicRegion	0	2.29	0.84	0.90	6.45	6.82	4.29	3.00	1.29	1.99	1.74	0.59	1.39	0.86	1.81	3.43	0.70	5.63	1.24	1.12	2.38	3.31	0.00	0.38	1.08	1.16	0.33	0.26	1.40	0.28
49	IG38_AR1	ActiveIntergenicRegion	0	9.85	4.25	10.28	33.74	13.98	1.89	12.82	10.19	2.89	5.30	2.70	8.37	1.85	4.22	6.01	7.39	9.43	8.29	2.41	5.19	5.38	5.75	5.30	6.47	4.60	5.67	3.38	9.13	4.77