Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP11-411M4.1	Gene	0	0.42	0.00	0.00	121.91	0.00	101.27	0.00	40.80	0.00	0.00	0.06	0.00	0.00	0.04	81.20	0.85	0.00	2.13	117.72	244.00	52.10	8.68	6.66	1.59	37.79	46.03	5.58	47.26	7.06
2	424690	Transcript	0	0.09	0.00	0.00	62.07	0.00	106.38	0.00	85.42	0.00	0.00	0.01	0.00	0.00	0.01	110.86	3.40	0.00	4.50	99.50	268.19	50.92	18.83	9.83	0.35	68.49	92.95	4.09	61.39	10.11
3	ER1a	ExonRegion	0	0.00	0.00	0.00	11.70	0.00	38.46	0.00	49.89	0.00	0.00	0.00	0.00	0.00	0.00	40.32	1.83	0.00	3.82	26.70	142.78	19.40	17.26	0.14	0.00	35.09	26.36	1.42	6.93	3.79
4	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	21.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	24.28	12.40	21.02	9.43	0.00	0.00	3.33	2.19	0.00	1.84	0.00
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	53.49	0.00	120.36	0.00	145.02	0.00	0.00	0.00	0.00	0.00	0.00	98.86	3.82	0.00	10.02	48.55	379.92	63.78	37.34	1.92	0.00	86.04	72.91	2.53	32.35	9.77
6	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	0.00	0.00
7	Ix	Intron	0	0.07	0.02	0.00	6.07	0.00	3.38	0.00	1.28	0.00	0.00	0.00	0.02	0.02	0.00	3.34	0.07	0.00	0.23	14.53	4.26	10.99	0.31	0.49	0.11	3.40	1.24	0.48	2.99	0.45
8	Ix_SR1	SilentIntronRegion	0	0.07	0.02	0.00	6.07	0.00	3.38	0.00	1.28	0.00	0.00	0.00	0.02	0.02	0.00	3.34	0.07	0.00	0.23	14.54	4.26	10.99	0.31	0.49	0.11	3.40	1.24	0.48	2.99	0.45
9	Ix	Intron	0	0.03	0.00	0.00	6.03	0.00	2.98	0.00	0.81	0.00	0.00	0.00	0.01	0.00	0.00	7.32	0.03	0.00	0.17	9.30	3.42	10.34	0.60	0.38	0.12	2.76	1.53	0.92	3.68	0.75
10	Ix_SR3	SilentIntronRegion	0	0.00	0.00	0.00	4.95	0.00	2.58	0.00	0.59	0.00	0.00	0.00	0.01	0.00	0.00	3.39	0.04	0.00	0.19	9.00	3.49	9.96	0.51	0.43	0.10	1.77	1.19	0.77	2.88	0.55
11	Ix_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	8.43	0.00	5.89	0.00	0.37	0.00	0.00	0.00	0.00	0.00	0.00	17.61	0.00	0.00	0.00	9.62	4.54	12.12	0.06	0.47	0.00	2.11	3.94	1.43	3.93	1.25
12	Ix_SR2	SilentIntronRegion	0	0.80	0.00	0.00	32.10	0.00	7.08	0.00	1.18	0.00	0.00	0.00	0.00	0.00	0.00	19.03	0.00	0.00	0.72	14.28	1.51	14.94	1.35	0.00	0.00	8.18	1.16	4.67	5.69	2.72
13	Ix_AR1	ActiveIntronRegion	0	0.22	0.00	0.00	11.70	0.00	6.21	0.00	2.50	0.00	0.00	0.00	0.00	0.00	0.00	30.05	0.00	0.00	0.20	11.11	4.42	12.01	2.21	0.00	0.00	10.86	4.33	1.72	8.80	2.71
14	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	5.99	0.00	2.20	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00	20.46	0.00	0.00	0.00	9.78	1.81	11.02	0.50	0.13	0.45	5.77	1.53	0.76	7.15	0.65
15	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	29.98	0.00	12.93	0.00	6.97	0.00	0.00	0.00	0.00	0.00	0.00	35.88	0.00	0.00	0.00	16.18	12.90	7.30	0.00	2.51	3.05	5.30	19.87	2.44	15.28	0.00
16	ER2a	ExonRegion	0	0.00	0.00	0.00	69.10	0.00	174.16	0.00	137.18	0.00	0.00	0.00	0.00	0.00	0.00	168.70	7.02	0.00	1.95	165.79	366.31	68.76	28.07	18.38	0.00	105.42	153.96	4.26	88.25	13.94
17	E2_Da	NovelBoundary	0	0.00	0.00	0.00	40.55	0.00	13.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	62.59	0.00	0.00	0.00	24.28	21.17	45.40	2.09	0.00	0.00	17.31	17.77	4.57	23.77	4.09
18	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	46.81	0.00	98.76	0.00	59.57	0.00	0.00	0.00	0.00	0.00	0.00	168.03	3.82	0.00	4.62	137.35	209.97	50.06	4.18	22.36	0.00	81.49	170.24	6.41	132.59	16.21
19	Ix	Intron	0	0.09	0.00	0.00	15.89	0.00	10.56	0.00	2.97	0.00	0.02	0.05	0.08	0.00	0.00	18.18	0.22	0.02	0.23	22.77	9.89	18.00	0.97	0.57	0.58	6.06	2.80	1.41	9.06	1.78
20	Ix_SR2	SilentIntronRegion	0	0.14	0.00	0.00	23.56	0.00	11.21	0.00	2.93	0.00	0.00	0.00	0.08	0.00	0.00	25.26	0.16	0.09	0.73	23.02	9.71	17.75	1.48	1.03	0.95	9.67	5.77	2.55	9.37	3.80
21	Ix_AR1	ActiveIntronRegion	0	0.17	0.00	0.00	20.75	0.00	10.25	0.00	3.87	0.00	0.00	0.00	0.00	0.00	0.00	24.47	0.00	0.00	0.31	28.16	10.87	23.55	1.01	0.43	0.69	7.78	2.38	0.40	9.87	1.63
22	Ix_SR1	SilentIntronRegion	0	0.07	0.00	0.00	13.06	0.00	10.46	0.00	2.80	0.00	0.02	0.07	0.10	0.00	0.00	15.21	0.28	0.00	0.10	21.67	9.75	16.99	0.84	0.48	0.47	4.84	2.16	1.32	8.83	1.31
23	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	37.31	0.00	8.94	0.00	2.44	0.00	0.00	0.00	0.00	0.00	0.00	25.51	0.00	0.00	0.00	32.37	0.00	5.66	0.00	0.00	0.00	5.80	5.45	0.00	20.98	1.39
24	ER3a	ExonRegion	0	0.46	0.00	0.00	129.28	0.00	100.16	0.00	35.44	0.00	0.00	0.06	0.00	0.00	0.05	78.40	0.49	0.00	2.07	119.08	241.95	52.62	7.32	6.33	1.73	34.41	41.29	5.82	46.84	6.84