Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CRYGS	Gene	0	12.10	15.38	18.99	15.13	3.83	7.69	33.50	28.59	34.89	11.26	6.35	22.65	2.34	8.16	24.42	21.11	19.47	4.89	6.06	4.90	7.95	2.27	1.67	10.15	11.39	10.66	8.21	3.44	3.55
2	392499	Transcript	0	1.29	1.12	1.23	0.77	0.00	0.30	2.11	3.75	1.82	1.32	0.07	0.64	0.42	0.46	0.50	0.00	1.38	0.25	0.87	0.45	0.22	0.34	0.39	0.12	0.68	1.20	1.38	0.00	0.00
3	307944	Transcript	0	9.41	6.84	5.63	6.78	12.84	8.74	8.54	0.00	8.26	8.63	6.69	14.24	2.05	7.76	6.35	15.76	9.60	10.52	6.77	0.90	5.29	0.00	0.00	3.99	5.75	3.21	0.00	1.78	0.00
4	460288	Transcript	0	11.60	18.82	11.72	13.85	4.01	10.73	15.70	10.56	43.85	13.03	7.73	16.28	1.93	8.13	24.65	25.00	24.16	6.10	7.35	4.63	10.73	1.93	1.45	12.12	13.84	5.71	5.84	3.37	4.79
5	ER1a	ExonRegion	0	0.41	0.53	0.00	0.00	0.00	0.00	0.33	0.91	0.55	0.00	0.20	0.00	0.00	0.00	0.00	0.00	0.07	0.00	1.05	0.45	0.00	0.59	0.00	0.35	0.23	0.52	0.00	0.00	0.00
6	E1_Da	NovelBoundary	0	24.89	128.56	34.26	188.51	64.11	69.33	106.53	22.49	146.23	62.47	62.95	109.00	69.45	32.10	103.25	41.23	59.87	23.12	145.21	43.67	94.14	11.28	22.06	49.23	17.43	14.38	30.96	23.63	36.68
7	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	I1	Intron	0	4.88	8.52	2.87	6.00	2.04	11.70	9.47	1.28	8.62	7.65	5.75	7.66	1.14	4.60	3.25	14.36	6.38	5.30	8.61	3.39	8.42	0.42	1.35	2.20	4.59	0.58	1.53	0.99	0.37
9	I1_SR1	SilentIntronRegion	0	2.38	9.16	0.40	4.31	1.09	9.97	7.78	0.82	7.20	5.31	2.26	5.47	1.44	3.35	1.03	10.54	5.77	3.77	9.59	4.19	6.95	0.20	1.56	0.96	1.11	0.00	0.35	0.21	0.30
10	I1_AR1	ActiveIntronRegion	0	7.03	7.22	6.23	5.16	3.82	14.60	8.62	2.30	10.83	9.26	8.56	11.89	0.71	6.32	7.90	16.08	6.83	6.10	10.52	3.36	10.97	0.85	2.04	2.69	5.14	0.49	0.94	2.26	0.52
11	I1_SR2	SilentIntronRegion	0	6.32	8.98	3.02	9.41	1.60	11.28	12.89	0.91	8.46	9.47	8.00	6.48	1.17	4.68	1.66	18.25	6.85	6.74	5.24	2.26	7.95	0.30	0.30	3.53	9.14	1.54	3.90	0.80	0.33
12	E2_Aa	NovelBoundary	0	2.48	25.69	4.19	0.00	0.00	16.88	33.87	2.14	16.84	36.55	10.91	16.69	0.00	9.66	0.00	36.41	23.25	9.25	16.18	16.54	21.22	0.00	1.92	6.10	4.77	2.19	8.10	2.25	4.09
13	ER2a	ExonRegion	0	9.41	6.84	5.63	6.78	12.84	8.74	8.54	0.00	8.26	8.63	6.69	14.24	2.05	7.76	6.35	15.76	9.60	10.52	6.77	0.90	5.29	0.00	0.00	3.99	5.75	3.21	0.00	1.78	0.00
14	E2_Ab	KnownBoundary	0	11.09	15.90	9.99	7.98	0.00	9.55	12.82	0.00	20.68	14.10	18.79	23.52	4.87	5.69	16.74	24.25	11.66	14.64	16.18	4.13	8.46	0.00	0.00	3.05	9.70	5.36	0.00	3.68	1.52
15	ER2b	ExonRegion	0	12.25	5.63	7.35	1.49	0.00	8.44	4.07	0.00	6.65	9.84	7.82	10.32	2.01	4.39	6.63	10.38	5.42	9.58	23.18	1.43	2.88	0.00	0.00	3.29	8.02	5.26	0.00	3.13	0.00
16	E2_Da	NovelBoundary	0	0.00	27.73	5.86	0.00	6.48	29.35	28.04	0.00	20.25	25.05	2.85	9.67	1.53	12.58	19.93	32.13	16.77	32.36	0.00	20.51	24.67	0.00	0.00	2.39	9.09	2.19	0.00	0.00	1.82
17	E2a_E3b	KnownJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	I2	Intron	0	5.87	16.94	6.14	13.77	5.11	13.55	14.80	3.89	24.43	11.18	8.44	17.87	1.92	7.17	14.75	17.70	16.36	5.88	8.08	5.00	8.09	1.10	1.41	5.24	6.72	3.35	2.30	2.98	2.45
19	I2_AR1	ActiveIntronRegion	0	6.71	14.17	2.93	8.06	3.74	9.02	11.02	1.64	14.73	9.53	2.68	14.08	2.48	6.04	11.44	12.71	12.23	7.76	8.10	4.74	9.42	0.69	0.94	1.65	3.40	1.41	0.20	2.67	0.58
20	I2_SR1	SilentIntronRegion	0	5.91	13.42	2.36	8.27	2.45	11.64	10.39	2.32	11.52	11.92	7.73	13.40	2.19	6.16	6.80	9.16	15.18	3.96	6.25	5.84	5.47	0.00	0.89	3.82	5.56	2.17	1.62	1.96	1.36
21	I2_AR2	ActiveIntronRegion	0	5.73	19.01	7.94	16.62	6.08	15.24	17.10	4.74	30.29	11.37	10.12	20.32	1.81	7.94	17.44	20.81	18.18	6.01	8.72	5.07	8.70	1.48	1.69	6.56	7.86	4.13	2.75	3.39	3.21
22	I2_SR2	SilentIntronRegion	0	4.75	0.00	0.00	5.30	3.61	7.11	2.98	4.08	4.18	11.74	2.64	2.74	0.00	0.00	10.88	15.95	0.00	2.85	2.36	0.00	0.00	0.00	0.00	0.00	3.17	1.16	6.77	0.00	0.00
23	E3_Aa	NovelBoundary	0	2.77	9.60	23.47	9.27	6.34	6.91	10.87	2.09	45.40	11.54	8.73	12.80	2.87	9.64	18.14	27.31	14.88	5.27	0.00	4.13	2.05	2.24	2.51	26.20	10.46	5.84	0.00	0.00	3.37
24	ER3a	ExonRegion	0	11.60	18.82	11.72	13.85	4.01	10.73	15.70	10.56	43.85	13.03	7.73	16.28	1.93	8.13	24.65	25.00	24.16	6.10	7.35	4.63	10.73	1.93	1.45	12.12	13.84	5.71	5.84	3.37	4.79
25	E3_Ab	KnownBoundary	0	11.03	18.13	27.08	0.00	5.60	7.37	26.43	22.20	56.00	16.18	6.01	21.60	5.16	10.61	44.85	35.11	20.80	0.00	8.09	7.36	8.90	3.99	2.41	16.39	22.84	6.14	7.95	2.02	6.17
26	ER3b	ExonRegion	0	23.60	26.85	54.66	39.71	5.31	9.38	102.79	68.15	64.61	24.25	9.89	59.85	6.84	18.31	48.55	46.64	38.11	6.15	7.14	16.49	13.55	5.15	4.68	18.38	20.25	29.24	27.44	8.47	8.24
27	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.61	0.00	0.00	0.00	0.00	1.34	1.37	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E3a_E4a	KnownJunction	0	38.75	27.34	80.75	81.96	0.00	15.58	113.80	117.15	74.70	22.89	15.94	88.52	9.81	21.85	84.31	39.47	48.67	4.62	8.09	13.65	27.44	0.00	2.02	21.59	20.65	67.59	22.36	7.77	4.59
29	E4_Aa	NovelBoundary	0	2.60	0.00	1.45	21.35	0.00	0.00	7.84	0.00	1.40	0.00	0.00	0.00	0.00	0.00	8.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00
30	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER4a	ExonRegion	0	20.00	20.65	41.37	24.43	5.39	8.00	82.72	90.10	45.44	11.84	8.19	45.95	2.93	11.94	45.46	24.27	23.37	4.87	5.80	4.98	8.49	4.29	2.54	14.93	14.87	25.28	13.41	5.15	3.29
32	E4_Da	KnownBoundary	0	10.56	0.00	1.15	0.00	0.00	0.00	13.50	26.72	16.99	3.48	0.00	2.29	0.00	1.04	0.00	0.00	3.38	0.00	8.09	0.00	3.69	4.76	0.00	0.00	0.00	4.29	0.00	0.00	0.00
33	ER4b	ExonRegion	0	3.46	2.83	3.68	2.31	0.00	0.89	6.00	10.36	4.90	3.97	0.00	1.93	1.26	1.37	1.49	0.00	2.92	0.74	1.58	0.89	0.65	0.43	1.17	0.00	1.79	3.08	4.14	0.00	0.00
34	IG44_AR2	ActiveIntergenicRegion	0	0.20	0.00	0.77	0.00	0.00	0.40	2.11	0.17	4.35	3.80	0.77	2.30	0.60	0.33	0.51	2.48	0.82	0.00	0.30	0.51	1.19	0.17	0.50	0.40	1.58	0.44	0.00	0.04	0.00
35	IG44_AR1	ActiveIntergenicRegion	0	0.16	0.41	0.35	0.00	0.00	1.67	2.66	0.75	2.73	1.32	1.16	1.56	0.61	0.54	1.82	0.00	0.93	0.28	1.41	0.61	1.42	0.00	0.00	0.62	1.14	0.69	1.88	0.00	0.00