Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP13-131K19.1	Gene	0	1.82	2.74	3.10	0.55	1.89	3.40	5.30	1.00	1.69	2.45	0.74	1.91	0.40	2.02	2.70	1.53	3.23	1.66	3.46	0.43	3.31	0.28	0.70	2.83	0.22	0.36	1.98	7.56	0.00
2	415982	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	2.09	0.00	0.21	0.01	0.00	0.85	0.00	0.00	3.18	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.40	0.00	0.00	0.00	0.91	0.00
3	429681	Transcript	0	0.00	0.61	0.00	0.00	0.00	0.24	0.37	0.00	1.67	0.00	0.00	0.00	0.00	0.00	0.00	1.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.72	0.00
4	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89	0.00	0.63	0.02	0.00	1.01	0.00	0.00	1.17	0.00	0.04	0.00	0.00	0.00	0.00	0.00	0.00	1.21	0.00	0.00	0.00	2.74	0.00
5	E1_Da	NovelBoundary	0	64.00	57.88	125.15	65.14	202.49	66.26	107.56	114.96	46.84	143.52	136.53	301.35	74.96	89.27	44.65	172.12	143.11	140.89	202.31	97.92	62.65	76.18	124.01	144.27	47.74	73.38	196.55	224.70	53.18
6	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	5.38	0.00	0.00	0.00	0.00	1.54	0.00	0.00	8.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E2_Aa	NovelBoundary	0	53.85	71.36	123.80	116.26	311.40	61.70	130.68	143.77	61.88	152.83	136.25	330.36	92.54	97.62	100.46	124.54	200.87	146.03	210.40	69.38	65.02	96.89	104.06	157.20	47.62	73.30	172.50	199.05	75.77
8	ER2a	ExonRegion	0	0.00	1.22	0.00	0.00	0.00	0.48	0.73	0.00	0.22	0.00	0.00	0.00	0.00	0.01	0.00	2.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.16	0.00
9	E2_Da	NovelBoundary	0	47.84	139.80	165.04	81.96	256.57	185.70	204.31	162.04	87.19	180.23	128.69	268.73	67.70	88.94	129.36	274.25	150.45	88.62	202.31	75.34	153.42	92.08	86.68	185.91	77.25	38.92	172.15	142.16	48.36
10	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.27	0.00
11	Ix	Intron	0	4.49	3.00	3.89	0.00	5.69	2.56	5.16	0.86	4.71	2.02	1.11	6.17	0.00	0.84	6.65	2.73	6.60	0.90	2.23	1.93	1.66	0.00	0.84	4.51	0.33	2.20	1.71	8.35	0.78
12	Ix_AR1	ActiveIntronRegion	0	4.52	3.03	3.93	0.00	5.74	2.58	5.21	0.87	4.75	2.04	1.12	6.22	0.00	0.85	6.71	2.75	6.66	0.91	2.25	1.94	1.68	0.00	0.85	4.55	0.34	2.22	1.72	8.43	0.79
13	Ix	Intron	0	3.33	5.88	1.70	0.97	2.64	5.39	4.77	1.37	4.32	4.30	1.77	4.76	0.26	2.29	2.99	5.06	8.68	1.95	6.27	3.12	6.37	0.12	0.86	3.93	0.67	0.85	1.11	1.21	0.54
14	Ix_AR1	ActiveIntronRegion	0	2.79	6.61	1.12	0.95	3.87	6.16	6.15	1.81	3.76	5.23	2.05	5.20	0.17	1.64	3.89	5.36	8.80	2.26	6.75	2.16	7.29	0.24	1.19	2.88	0.76	0.62	1.69	1.94	0.26
15	Ix_SR1	SilentIntronRegion	0	3.93	5.14	2.31	1.00	1.36	4.61	3.35	0.91	4.94	3.33	1.49	4.32	0.36	2.99	2.05	4.78	8.61	1.64	5.77	4.15	5.43	0.00	0.50	5.05	0.59	1.09	0.51	0.45	0.84
16	Ix	Intron	0	4.06	1.44	1.79	0.59	2.41	2.60	4.15	1.97	1.62	2.26	0.59	1.42	0.64	1.60	4.40	2.49	3.81	1.11	0.79	0.68	2.59	0.59	0.60	1.95	1.18	0.13	0.60	1.75	0.33
17	Ix_SR1	SilentIntronRegion	0	4.09	1.45	1.80	0.59	2.43	2.62	4.18	1.98	1.63	2.27	0.59	1.43	0.64	1.61	4.43	2.50	3.84	1.11	0.79	0.69	2.60	0.60	0.60	1.96	1.19	0.13	0.61	1.76	0.33
18	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.97	0.00	2.75	0.00	0.00	0.00	0.00	0.00	2.17	0.00	0.00	0.00	0.00	0.00	0.00
19	ER3a	ExonRegion	0	2.90	3.94	4.93	0.88	3.00	5.24	7.98	1.58	2.47	3.90	1.17	2.81	0.64	3.22	4.04	1.52	5.12	2.64	5.50	0.68	5.26	0.44	1.11	4.23	0.35	0.58	3.15	11.03	0.00
20	ER3b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00