Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TREX1	Gene	0	117.92	59.89	170.76	139.47	48.86	83.39	188.11	160.70	151.13	149.85	97.66	114.23	95.73	60.24	85.20	95.80	152.89	71.75	55.03	90.53	58.31	150.57	68.00	115.31	54.45	72.89	36.73	235.21	87.44
2	296443	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	395677	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	433541	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	444177	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	456089	Transcript	1	56.27	8.82	82.14	73.34	146.05	11.89	144.24	82.06	33.16	23.73	19.49	25.72	11.11	4.32	7.97	22.57	42.54	0.00	8.09	23.16	15.48	27.52	4.43	5.14	3.45	10.56	14.21	41.61	15.42
7	492235	Transcript	0	5.43	0.00	17.79	45.30	6.78	9.86	19.28	17.52	12.21	8.87	2.59	4.73	10.80	0.86	0.00	9.33	9.18	0.00	0.00	9.92	1.64	23.77	6.99	0.00	5.19	3.52	8.00	32.58	8.15
8	436480	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	422277	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.74	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.39	0.00
11	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	Ix	Intron	0	1.09	2.45	6.98	0.91	1.24	5.22	3.06	0.00	2.91	2.38	1.96	2.34	0.65	0.97	5.81	2.83	3.02	1.99	2.02	2.09	3.25	2.29	1.83	1.91	1.27	1.59	0.93	3.09	0.93
13	Ix_AR1	ActiveIntronRegion	0	1.09	2.46	7.02	0.91	1.24	5.25	3.08	0.00	2.92	2.39	1.97	2.35	0.66	0.98	5.84	2.84	3.04	2.00	2.03	2.10	3.27	2.30	1.84	1.92	1.27	1.60	0.93	3.11	0.94
14	ER2a	ExonRegion	0	2.62	1.01	4.19	3.89	1.99	4.62	2.76	3.22	4.08	2.34	0.85	4.69	0.00	1.09	10.86	3.71	7.61	1.95	4.78	0.87	2.41	0.86	1.99	4.61	1.81	1.87	0.29	6.78	0.43
15	E2_Ab	KnownBoundary	0	5.54	0.00	8.77	10.78	7.37	4.83	0.00	4.43	1.37	5.15	1.55	1.84	0.00	1.95	25.91	3.82	13.39	4.62	32.37	0.00	6.90	0.00	0.00	10.47	5.08	3.69	0.00	7.77	0.00
16	ER2b	ExonRegion	0	6.82	1.40	7.37	1.96	2.78	9.38	3.89	5.49	5.63	8.12	0.89	8.38	0.01	3.57	13.89	6.50	8.76	8.45	4.53	1.90	6.58	3.63	5.51	11.60	4.14	3.53	4.47	13.03	2.13
17	E2_Da	KnownBoundary	0	2.60	0.00	2.42	0.00	0.00	1.61	0.00	1.94	0.00	1.68	0.00	7.02	0.00	0.97	17.54	6.96	4.03	0.00	0.00	0.00	5.74	2.48	0.00	0.00	1.48	1.67	0.00	8.85	0.00
18	E2a_E2d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2_Ac	KnownBoundary	0	8.73	0.00	4.04	0.00	0.00	3.76	5.84	4.43	0.00	1.88	0.00	3.04	0.00	2.35	0.00	3.67	2.30	9.25	0.00	0.00	1.72	1.99	4.92	0.00	0.00	5.88	0.00	0.00	0.00
20	ER2c	ExonRegion	0	8.57	0.00	8.98	0.00	0.00	5.50	4.03	7.36	0.00	2.89	2.23	11.13	0.00	3.97	10.50	5.06	5.01	5.80	6.22	2.11	5.88	5.41	3.62	0.00	3.39	7.86	0.00	13.24	1.34
21	ER2d	ExonRegion	0	3.95	2.05	5.59	3.28	3.35	8.49	3.80	5.21	2.44	6.26	0.65	4.24	0.00	3.90	16.15	7.63	5.95	8.55	5.97	4.84	3.66	4.70	2.04	8.55	4.28	4.38	1.26	11.46	0.76
22	E2_Db	KnownBoundary	1	8.73	4.27	4.24	0.00	0.00	5.41	0.00	7.12	0.00	7.35	0.00	8.43	0.00	3.01	17.34	9.33	21.34	0.00	8.09	0.00	0.00	4.08	6.75	5.50	6.78	3.48	0.00	14.56	0.00
23	E2b_E2i	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER2e	ExonRegion	0	10.30	1.40	11.38	20.33	5.04	6.35	10.35	12.33	2.27	9.12	2.77	9.22	4.75	3.25	11.13	13.21	16.66	6.39	1.71	1.03	3.41	10.20	6.66	7.56	3.42	6.08	0.69	16.70	4.42
25	E2_Ad	KnownBoundary	0	4.72	0.00	1.84	0.00	0.00	1.96	0.00	9.06	1.46	2.04	1.49	1.45	1.40	1.37	7.57	7.11	7.14	4.62	0.00	0.00	2.05	6.27	4.33	5.62	0.00	0.00	0.00	3.91	0.00
26	E2_Ae	KnownBoundary	0	2.77	0.00	3.01	10.78	0.00	0.00	2.92	2.54	0.00	0.00	0.00	3.28	0.00	0.00	0.00	3.67	0.00	0.00	0.00	0.00	2.01	0.00	2.51	0.00	0.00	2.15	0.00	9.12	0.00
27	E2_Af	KnownBoundary	0	0.00	0.00	8.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.01
28	E2_Ag	KnownBoundary	0	113.55	21.52	234.92	575.47	282.36	93.62	231.09	172.24	102.81	96.07	105.98	108.55	102.79	39.15	58.80	163.71	74.55	70.25	16.18	88.07	50.98	192.23	76.29	93.07	31.94	148.18	41.65	396.30	115.22
29	ER2f	ExonRegion	0	90.03	17.32	109.56	301.15	104.16	63.86	172.80	111.64	54.64	109.46	38.19	79.50	71.56	23.83	42.26	155.98	41.53	90.31	35.80	50.59	48.89	99.64	58.36	60.82	24.04	64.72	19.65	154.11	50.76
30	ER2g	ExonRegion	0	156.74	43.94	270.84	673.68	281.46	135.58	305.39	226.22	126.12	178.31	109.79	139.46	128.76	54.42	119.01	267.94	91.03	183.54	70.72	119.45	87.01	238.19	108.95	123.69	44.85	162.47	52.89	426.87	137.57
31	ER2h	ExonRegion	0	235.78	68.98	488.38	941.50	429.66	193.83	462.61	376.04	185.66	278.65	152.33	200.07	183.16	78.69	193.22	370.75	142.50	315.22	108.62	178.48	136.93	384.88	156.87	162.41	63.96	221.60	93.41	672.39	233.87
32	ER2i	ExonRegion	0	271.12	75.93	543.28	1043.62	477.23	223.52	479.92	420.50	252.12	303.19	178.18	202.78	183.46	77.18	202.42	350.98	191.07	231.43	87.67	196.27	157.43	460.37	162.54	168.22	77.96	224.34	106.28	700.03	240.86
33	E2_Dc	KnownBoundary	0	17.40	8.73	32.34	8.63	12.08	10.01	14.36	11.30	10.08	10.71	7.59	15.60	4.74	3.81	8.77	16.45	81.12	19.65	0.00	10.17	3.37	6.51	2.12	10.17	1.74	1.76	18.54	15.86	7.89
34	E2c_E2h	KnownJunction	1	155.54	41.69	633.59	656.14	176.70	137.78	188.35	219.87	226.51	204.96	84.31	139.82	128.11	49.34	115.41	174.42	167.31	14.51	32.37	82.12	108.50	318.39	90.67	84.58	55.50	103.72	59.74	415.93	209.07
35	E2c_E2j	NovelJunction	1	7.61	0.00	30.92	19.20	30.65	1.80	14.76	3.78	9.29	19.41	12.81	17.41	11.24	4.28	0.00	16.52	11.19	0.00	0.00	7.11	1.48	16.87	19.70	10.41	0.00	7.17	14.61	49.11	5.48
36	E2c_E2k	KnownJunction	0	5.43	0.00	17.79	45.30	6.78	9.86	19.28	17.52	12.21	8.87	2.59	4.73	10.80	0.86	0.00	9.33	9.18	0.00	0.00	9.92	1.64	23.77	6.99	0.00	5.19	3.52	8.00	32.58	8.15
37	E2c_E2l	KnownJunction	1	56.27	8.82	82.14	73.34	146.05	11.89	144.24	82.06	33.16	23.73	19.49	25.72	11.11	4.32	7.97	22.57	42.54	0.00	8.09	23.16	15.48	27.52	4.43	5.14	3.45	10.56	14.21	41.61	15.42
38	ER2j	ExonRegion	0	26.35	8.41	18.53	5.79	8.74	21.78	39.91	34.23	20.82	23.68	7.66	17.04	6.41	8.06	25.89	25.65	74.41	17.34	7.83	17.07	13.36	10.22	2.60	21.10	7.06	7.71	9.49	33.47	9.11
39	E2_Ah	KnownBoundary	0	18.64	25.50	20.01	10.78	34.19	10.63	27.18	39.76	26.49	19.09	7.40	6.33	7.42	7.42	16.34	17.82	54.38	23.12	16.18	14.39	8.26	9.63	2.51	22.91	3.52	5.54	2.34	18.51	2.67
40	ER2k	ExonRegion	0	153.75	46.59	542.16	538.48	177.98	139.09	193.33	237.16	187.53	224.70	101.59	125.94	118.68	58.30	92.66	158.52	191.97	32.75	30.86	86.88	107.50	285.65	89.10	104.23	54.83	105.44	43.46	388.39	167.53
41	E2_Ai	KnownBoundary	0	42.17	4.46	134.96	108.28	60.72	38.33	53.78	53.60	40.08	80.05	32.27	42.47	24.20	27.61	43.05	45.29	88.78	9.25	8.09	21.01	29.96	45.70	19.70	46.66	14.78	24.59	6.11	77.82	22.22
42	ER2l	ExonRegion	0	63.59	11.31	400.83	181.73	70.66	50.51	69.73	70.92	85.47	88.23	38.70	63.81	47.68	35.27	40.24	68.24	154.60	23.15	16.93	32.69	36.87	75.05	21.70	54.58	22.82	33.41	5.22	92.79	73.72
43	ER2m	ExonRegion	0	67.55	24.50	71.08	115.89	31.27	25.66	55.29	72.62	41.91	47.78	20.88	30.13	27.01	36.87	37.57	45.17	76.45	44.99	23.51	31.89	22.72	97.85	21.57	64.62	16.16	16.15	10.86	57.82	18.36
44	E2_Aj	KnownBoundary	0	151.89	41.49	36.28	90.59	19.16	37.33	68.49	134.77	61.85	88.64	35.11	36.93	31.59	45.60	62.59	75.81	88.46	79.37	32.37	96.26	33.61	264.14	41.57	146.85	36.14	34.46	30.32	114.80	28.36
45	ER2n	ExonRegion	0	200.98	95.61	59.26	118.16	17.17	171.69	173.73	320.54	226.36	140.84	31.38	85.12	102.96	67.67	76.93	167.63	145.46	132.15	57.29	154.14	111.37	385.74	64.29	171.07	48.82	115.93	19.57	170.55	124.57
46	E2_Ak	KnownBoundary	0	262.90	160.45	71.88	104.83	12.53	279.51	303.30	439.23	395.73	213.87	54.22	121.68	154.95	73.98	119.79	274.48	171.25	190.98	80.92	214.77	196.02	442.61	74.32	206.00	64.40	190.32	13.32	262.22	211.72
47	ER2o	ExonRegion	0	226.08	106.58	354.69	262.87	78.65	162.73	330.55	307.74	264.61	327.71	178.91	214.42	185.35	124.07	144.29	195.65	287.92	142.66	91.78	149.15	104.93	290.24	145.28	228.31	107.56	139.20	53.03	472.93	157.96
48	E2_Al	KnownBoundary	0	280.00	75.23	418.12	303.05	93.14	143.65	332.25	389.32	264.63	280.70	190.22	257.53	167.79	128.49	158.06	226.82	324.85	180.96	145.66	184.58	115.24	292.04	121.20	253.32	131.08	120.76	56.31	404.25	131.23
49	ER2p	ExonRegion	0	289.55	172.64	420.90	272.62	87.73	209.84	543.27	413.83	401.43	416.01	304.99	352.87	280.03	164.37	223.48	225.66	437.65	177.00	164.49	247.77	141.01	358.15	183.28	292.09	149.98	185.22	106.73	656.24	247.21
50	E2_De	KnownBoundary	0	321.23	246.45	196.65	266.38	82.38	306.40	764.50	403.85	919.91	518.45	311.95	271.02	353.09	159.24	325.09	326.27	318.44	280.88	298.97	309.38	323.57	282.81	201.87	381.44	229.32	316.84	74.10	547.18	334.86
51	ER2q	ExonRegion	0	225.19	114.70	284.32	249.40	90.50	121.87	310.50	269.25	343.09	203.38	166.15	149.61	163.64	101.17	135.35	130.80	173.28	99.18	89.39	184.75	113.45	297.71	113.17	220.38	100.82	136.69	73.06	340.37	148.26
52	ER2r	ExonRegion	0	10.72	9.85	23.56	36.56	4.98	6.87	30.24	7.36	19.10	7.22	5.95	4.95	3.90	9.07	11.20	7.59	10.02	10.92	4.53	16.86	0.00	10.82	3.62	8.60	2.86	11.00	10.99	17.93	13.42
53	ER2s	ExonRegion	0	4.29	3.28	10.66	25.59	4.98	2.06	8.06	4.60	5.62	5.05	1.79	1.24	0.65	4.54	11.20	3.80	5.51	4.09	0.00	7.03	0.00	1.80	0.90	3.23	0.00	4.71	4.58	6.52	3.36