Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	HYAL3	Gene	0	32.63	3.68	33.90	8.11	34.35	9.84	20.81	15.49	7.34	7.18	5.80	15.81	23.75	3.57	7.96	13.13	12.60	5.74	3.69	7.48	10.21	11.05	11.31	12.86	13.72	9.67	7.22	13.27	12.66
2	66014	Transcript	0	0.00	0.00	18.51	0.00	0.00	0.00	0.00	0.00	3.59	0.00	0.00	1.87	7.39	2.75	0.00	0.00	2.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.96
3	336307	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	415204	Transcript	0	0.00	0.00	0.00	0.00	7.37	0.00	0.00	2.09	0.00	0.00	1.30	1.42	2.80	0.00	0.00	0.00	2.09	0.00	0.00	7.11	0.00	4.42	2.51	0.00	0.00	0.00	0.00	3.59	0.00
5	450982	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	359051	Transcript	0	6.68	0.00	17.52	29.66	5.59	5.62	10.45	3.84	2.30	2.60	7.33	7.98	4.10	0.00	0.00	16.21	1.83	1.26	0.00	0.00	4.79	3.77	1.81	0.00	5.45	8.57	11.91	0.00	10.24
7	435141	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	IG17_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.72	0.00	0.00	0.00	0.00	0.00
9	ER1a	ExonRegion	0	0.00	0.00	1.32	0.00	0.95	0.77	0.00	0.00	0.71	0.85	0.00	0.00	1.17	0.00	0.00	0.63	0.56	0.00	0.00	0.37	0.23	0.21	1.01	2.50	0.63	0.65	0.00	3.88	0.41
10	E1_Ab	KnownBoundary	0	2.71	0.00	6.60	10.35	22.84	1.73	2.57	1.89	1.89	1.72	0.00	1.17	1.21	0.00	0.00	3.29	2.21	4.62	0.00	7.11	1.64	1.85	2.22	5.20	1.93	5.62	0.00	1.75	2.51
11	ER1b	ExonRegion	0	14.46	0.00	24.37	2.16	55.33	0.76	6.08	3.66	1.91	2.27	1.23	9.35	10.48	0.55	1.39	6.11	6.49	4.17	1.93	2.66	1.81	6.97	4.68	4.48	3.57	7.00	2.37	6.84	8.39
12	E1a_E4a	KnownJunction	1	17.22	0.00	1.22	0.00	7.37	1.76	0.00	5.08	0.00	1.76	0.00	0.00	6.59	0.00	7.77	7.04	4.41	0.00	16.18	4.13	9.23	4.33	7.29	3.05	3.71	4.29	0.00	14.42	7.20
13	E1a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	7.37	0.00	0.00	2.09	0.00	0.00	1.30	1.42	2.80	0.00	0.00	0.00	2.09	0.00	0.00	7.11	0.00	4.42	2.51	0.00	0.00	0.00	0.00	3.59	0.00
14	ER1c	ExonRegion	1	15.46	0.00	5.79	3.08	28.84	2.46	0.00	6.69	0.00	0.99	1.19	2.99	7.45	0.00	2.36	5.06	7.64	0.00	9.05	10.36	4.50	8.73	6.85	6.34	4.14	3.14	3.47	10.47	5.02
15	ER2a	ExonRegion	0	4.40	0.00	12.29	18.56	4.98	3.42	7.34	2.60	1.50	1.48	5.04	4.82	3.23	0.00	0.00	9.54	1.26	2.52	0.00	0.00	2.23	2.59	1.11	0.00	3.52	4.43	5.02	0.00	6.68
16	E2a_E4a	KnownJunction	0	8.97	0.00	22.75	40.77	6.19	7.83	13.56	5.08	3.11	3.71	9.62	11.14	4.97	0.00	0.00	22.87	2.41	0.00	0.00	0.00	7.34	4.96	2.51	0.00	7.39	12.70	18.79	0.00	13.80
17	E2a_E4b	NovelJunction	0	6.02	0.00	0.00	0.00	0.00	0.00	2.92	2.54	0.00	0.00	1.61	1.54	3.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.07
18	I2	Intron	0	6.39	0.35	1.00	0.00	5.10	1.64	1.50	0.82	1.09	1.72	0.35	0.92	0.19	0.54	2.88	2.59	2.89	1.48	0.48	0.71	1.06	0.27	0.54	1.92	0.64	0.94	0.27	2.19	0.00
19	I2_AR1	ActiveIntronRegion	0	3.30	0.00	0.80	0.00	0.23	1.66	0.80	0.00	0.38	1.39	0.16	0.96	0.33	0.00	2.22	3.29	3.45	3.19	1.54	0.00	1.68	0.87	0.00	2.86	0.69	0.76	0.88	1.23	0.00
20	I2_SR1	SilentIntronRegion	0	7.85	0.51	1.09	0.00	7.34	1.64	1.83	1.20	1.42	1.89	0.45	0.91	0.13	0.79	3.21	2.29	2.67	0.72	0.00	1.03	0.79	0.00	0.79	1.52	0.62	1.03	0.00	2.64	0.00
21	E3_Aa	NovelBoundary	0	8.38	0.00	3.04	0.00	6.93	3.26	2.63	6.32	1.52	0.00	0.00	0.00	1.24	2.02	8.37	9.56	8.58	0.00	0.00	0.00	2.01	0.00	4.38	6.10	1.93	0.00	15.56	4.04	0.00
22	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E3_Da	NovelBoundary	0	14.27	0.00	3.46	0.00	0.00	0.00	0.00	2.49	1.31	2.04	0.00	0.00	1.24	0.00	0.00	5.97	0.00	0.00	8.09	0.00	0.00	2.48	5.02	0.00	0.00	0.00	0.00	0.00	0.00
24	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	I3	Intron	0	3.12	0.00	0.81	0.00	0.00	0.67	1.96	0.00	1.09	2.10	0.00	1.20	0.00	0.88	4.48	2.41	2.90	0.00	0.00	1.34	0.00	0.88	0.00	2.09	0.00	2.29	0.00	3.96	0.00
26	I3_SR1	SilentIntronRegion	0	3.31	0.00	0.86	0.00	0.00	0.71	2.08	0.00	1.16	2.16	0.00	1.27	0.00	0.93	4.75	2.56	3.08	0.00	0.00	1.42	0.00	0.93	0.00	2.22	0.00	2.43	0.00	4.20	0.00
27	E4_Aa	NovelBoundary	0	5.31	0.00	5.88	0.00	5.60	3.49	0.00	1.89	2.71	0.00	0.00	3.28	0.00	1.13	9.97	3.82	3.78	0.00	0.00	3.56	3.65	0.00	5.02	0.00	1.48	0.00	0.00	0.00	0.00
28	ER4a	ExonRegion	0	36.92	3.60	36.44	8.74	36.96	10.54	22.93	14.55	4.84	8.34	6.49	14.16	14.65	2.65	8.73	16.01	16.66	4.60	3.77	7.83	13.75	7.51	11.93	16.16	15.01	8.55	6.83	16.67	13.85
29	E4_Da	KnownBoundary	0	43.41	4.85	53.07	0.00	44.65	18.07	47.03	20.16	18.27	11.22	10.31	13.86	25.00	4.21	24.32	7.65	21.90	9.25	16.18	0.00	28.64	8.95	6.94	10.53	12.12	15.36	6.86	11.10	12.55
30	ER4b	ExonRegion	0	42.40	3.81	42.38	9.44	31.53	13.32	26.47	22.67	7.01	7.06	8.65	19.12	20.35	3.08	8.93	16.53	17.03	6.97	3.46	6.65	16.69	11.81	13.87	14.99	16.19	8.39	7.18	10.45	10.42
31	E4_Ab	KnownBoundary	0	24.66	0.00	40.44	0.00	26.97	9.44	10.58	16.67	5.76	10.71	11.48	13.58	15.70	4.08	8.37	7.11	4.30	10.02	8.09	15.05	5.62	15.61	19.95	5.26	7.43	6.05	12.23	5.93	17.46
32	ER4c	ExonRegion	0	46.96	2.28	44.99	3.96	40.20	9.45	24.66	21.10	7.99	3.04	4.20	28.98	34.96	4.87	9.96	14.92	20.47	11.50	4.21	15.19	7.41	16.75	18.65	14.92	16.66	14.43	7.19	16.12	15.90
33	E4b_E5a	KnownJunction	0	31.14	0.00	31.42	18.55	31.98	5.45	23.29	11.00	17.05	7.11	1.61	16.45	37.07	4.59	0.00	3.37	22.46	9.25	0.00	10.83	7.70	6.95	20.14	23.81	13.98	16.01	2.14	13.57	21.52
34	E4b_E6a	KnownJunction	0	15.04	0.00	6.00	0.00	42.00	5.29	0.00	2.34	1.34	0.00	2.91	4.37	5.67	0.00	0.00	6.96	0.99	0.00	0.00	6.53	0.00	0.00	3.69	0.00	1.93	2.15	4.87	2.07	1.68
35	ER5a	ExonRegion	0	34.89	3.65	55.63	5.85	53.36	8.08	22.51	27.80	6.88	8.44	8.22	25.22	29.47	4.73	6.22	5.82	16.33	3.73	1.31	8.34	7.72	9.03	10.55	13.00	13.99	12.05	7.77	12.01	15.26
36	E5a_E6a	KnownJunction	0	36.51	0.00	72.95	0.00	62.78	6.87	16.31	36.23	3.93	5.59	5.06	29.61	31.72	4.28	9.97	12.55	12.79	0.00	8.09	11.08	8.86	16.63	11.38	13.28	16.25	20.73	8.80	16.40	6.01
37	ER6a	ExonRegion	0	45.32	3.49	39.85	14.47	36.43	12.97	32.33	23.07	11.34	9.09	6.21	23.70	41.23	7.50	11.29	15.66	15.87	8.17	2.87	11.93	11.76	17.58	16.16	16.30	19.64	16.08	13.32	21.29	17.24
38	E6_Da	KnownBoundary	0	14.86	0.00	12.03	10.78	25.50	1.61	5.55	4.38	1.13	0.00	4.75	2.77	8.98	1.66	8.77	6.20	1.22	0.00	0.00	0.00	0.00	6.37	4.33	5.14	7.08	3.39	0.00	6.11	4.23
39	E6a_E6b	KnownJunction	0	0.00	0.00	18.51	0.00	0.00	0.00	0.00	0.00	3.59	0.00	0.00	1.87	7.39	2.75	0.00	0.00	2.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.96
40	E6_Ab	KnownBoundary	0	11.50	0.00	18.46	0.00	46.57	8.86	10.36	11.45	13.76	7.39	0.00	8.92	20.38	1.13	0.00	10.56	4.19	4.62	0.00	4.13	11.19	11.13	2.22	5.80	11.97	16.01	4.32	4.27	15.65
41	ER6b	ExonRegion	0	42.44	0.00	27.15	11.70	64.76	12.37	14.51	16.20	14.38	8.37	5.95	12.37	34.29	6.89	20.16	12.65	7.01	10.92	0.00	10.12	7.99	13.70	7.23	14.63	15.72	21.06	3.66	11.74	21.74
42	ER6c	ExonRegion	0	37.84	8.59	51.58	9.81	59.01	18.94	34.89	20.30	14.98	13.23	9.03	19.73	48.28	7.58	9.57	17.98	11.73	6.26	7.87	10.63	12.62	22.25	19.23	17.70	20.40	16.72	20.08	19.91	20.12
43	E6_Db	KnownBoundary	0	30.79	0.00	27.18	0.00	11.05	14.81	29.75	6.22	4.72	7.91	1.30	9.28	48.44	5.43	7.57	26.16	5.24	9.25	8.09	8.27	14.76	20.18	6.35	16.39	23.64	20.94	5.07	14.56	18.16
44	ER6d	ExonRegion	0	36.99	8.27	19.78	13.80	11.25	17.34	19.73	9.71	16.54	14.72	4.95	16.52	36.81	4.05	7.05	17.14	7.80	12.68	3.28	6.48	8.01	13.38	8.40	11.14	21.95	11.48	1.54	13.22	17.02
45	E6_Dc	KnownBoundary	0	30.44	27.05	12.43	10.78	5.89	23.48	19.57	10.80	19.49	11.54	8.73	19.61	43.15	4.05	9.97	28.46	6.98	4.62	0.00	0.00	10.39	7.44	15.37	16.99	15.76	4.16	2.09	10.29	13.47
46	ER6e	ExonRegion	0	25.65	16.99	9.94	17.25	16.42	11.81	20.28	18.07	12.73	7.60	6.06	10.73	40.80	3.60	3.50	12.69	4.82	5.07	12.02	4.39	11.37	15.32	10.20	14.45	14.74	12.18	1.72	4.33	10.76
47	E6_Dd	KnownBoundary	0	19.41	0.00	16.27	19.20	24.76	5.41	2.52	25.98	10.14	6.99	1.61	5.84	40.47	4.25	8.97	3.52	3.69	4.62	8.09	7.28	7.06	12.06	2.07	8.13	3.14	7.04	2.04	6.60	8.58
48	ER6f	ExonRegion	0	15.88	1.09	19.96	1.32	11.23	4.03	4.99	6.62	8.82	6.44	5.02	6.07	18.51	2.13	13.96	9.19	2.56	3.58	3.53	3.71	6.56	7.26	2.59	7.77	7.03	2.02	1.62	8.50	8.38