Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	KLHDC8B	Gene	0	80.49	58.80	59.64	17.87	24.57	76.80	32.99	22.86	78.10	55.57	41.19	82.57	34.72	99.51	51.07	64.64	49.53	71.37	27.49	37.72	25.12	109.53	50.51	145.97	58.68	76.50	54.31	22.80	42.28
2	445277	Transcript	0	0.15	0.00	0.92	0.00	0.00	0.20	0.00	1.12	0.28	0.52	0.26	0.57	0.79	1.62	0.00	3.62	1.07	2.92	0.00	0.00	0.51	2.12	1.03	2.23	0.51	3.20	1.70	0.93	2.97
3	332780	Transcript	0	29.25	15.54	23.59	14.63	14.22	29.17	20.23	6.65	66.36	14.46	17.30	27.24	22.15	39.37	26.91	12.35	20.34	23.20	5.30	10.52	13.25	60.77	11.44	89.59	31.64	35.48	38.91	10.91	23.54
4	459846	Transcript	0	0.00	0.00	4.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	6.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.15
5	476495	Transcript	0	1.86	0.00	2.47	0.00	0.00	4.29	2.39	0.00	3.40	5.73	2.53	4.54	0.02	5.65	0.09	1.48	0.73	4.40	7.17	5.11	0.05	4.46	2.84	6.64	4.39	1.66	2.14	0.00	0.02
6	471811	Transcript	0	9.31	2.12	3.75	2.83	0.36	5.16	0.65	1.32	1.55	1.92	1.68	2.29	1.15	4.66	5.44	3.16	2.86	5.32	1.17	2.88	1.17	2.29	0.97	6.90	4.12	1.65	1.53	1.54	0.93
7	462582	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1a	ExonRegion	0	0.31	0.00	1.84	0.00	0.00	0.39	0.00	2.24	0.56	1.03	0.51	1.15	1.58	3.24	0.00	7.23	2.15	5.85	0.00	0.00	1.02	4.25	2.07	4.46	1.02	6.40	3.40	1.86	5.94
9	ER1b	ExonRegion	0	8.77	3.88	10.51	0.00	0.45	8.62	5.13	7.36	3.57	6.96	5.30	15.18	4.72	16.08	1.53	19.33	22.77	34.49	2.06	11.24	4.15	25.57	20.71	16.82	4.16	31.86	13.82	8.00	14.89
10	ER1c	ExonRegion	0	94.28	43.64	48.59	16.02	31.55	87.50	34.24	17.97	45.03	63.32	27.49	112.26	41.63	79.29	43.83	178.40	45.76	115.36	25.50	48.45	30.84	110.45	76.18	77.75	37.73	179.47	72.59	52.08	58.52
11	E1a_E2a	KnownJunction	0	12.98	7.17	53.04	9.27	0.00	13.35	2.12	8.86	8.77	13.10	5.38	29.76	5.38	29.25	0.00	22.95	19.61	13.87	0.00	10.92	16.04	30.24	8.62	13.46	3.37	24.03	2.34	8.90	5.25
12	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.34	0.00	0.00	0.00	2.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	1.49
13	E2_Aa	NovelBoundary	0	0.00	0.00	1.47	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.21	0.00	0.00	0.00	0.00	1.89	0.00	0.00	5.98	0.00	0.00	0.00	0.00	0.00
14	ER2a	ExonRegion	0	15.17	12.80	22.05	1.13	7.22	13.71	8.50	8.40	7.52	10.88	11.46	23.01	6.58	33.94	1.94	14.83	15.45	17.28	3.42	11.49	5.12	34.23	7.09	36.07	13.43	15.74	4.09	4.05	11.84
15	E2_Ab	KnownBoundary	0	21.41	17.84	9.59	0.00	6.34	27.05	8.64	18.26	11.57	8.83	13.10	22.80	4.27	52.95	7.77	9.94	14.07	19.26	8.09	14.31	5.33	72.78	4.28	92.12	33.87	14.25	4.57	2.25	17.17
16	ER2b	ExonRegion	0	67.61	53.15	6.60	6.22	4.45	83.65	25.78	22.21	57.99	47.29	16.22	70.62	27.27	99.28	36.76	109.84	46.53	99.30	20.32	60.67	31.64	104.94	31.22	89.27	46.29	93.29	6.96	18.21	51.69
17	E2_Da	KnownBoundary	0	44.36	36.07	7.42	19.84	13.85	53.37	44.23	10.95	68.79	98.07	29.01	116.11	41.17	111.67	91.69	143.74	83.71	127.79	40.46	18.69	31.49	64.32	79.69	64.42	44.06	165.65	30.61	46.82	106.04
18	E2a_E3c	KnownJunction	0	0.00	0.00	4.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	6.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.15
19	ER2c	ExonRegion	0	61.02	32.57	53.77	9.52	26.18	40.54	26.24	10.49	27.50	44.88	23.51	71.05	24.34	89.51	29.68	46.58	42.73	58.57	12.28	24.64	16.69	69.73	43.90	90.32	41.23	62.12	31.46	19.95	29.29
20	E2_Db	NovelBoundary	0	10.91	0.00	4.61	0.00	0.00	7.21	2.63	2.34	2.89	9.39	1.61	5.78	0.00	12.67	0.00	3.60	3.44	4.62	24.28	15.80	0.00	1.99	4.48	9.51	10.61	5.19	0.00	0.00	0.00
21	E2b_E3b	KnownJunction	0	61.11	23.56	70.01	19.84	50.55	43.20	33.47	24.44	46.53	57.52	48.53	54.16	32.70	92.79	55.61	50.57	27.48	94.01	8.09	42.34	23.71	97.48	73.48	128.54	46.49	99.99	66.40	13.97	20.40
22	E2_Dc	NovelBoundary	0	22.71	0.00	4.09	0.00	6.78	5.64	0.00	0.00	1.55	5.67	0.00	3.40	1.97	10.81	18.34	11.17	7.29	9.25	0.00	18.36	1.80	4.96	0.00	13.22	5.76	0.00	2.48	2.29	1.52
23	E2c_E3b	KnownJunction	0	0.00	0.00	2.44	0.00	0.00	3.91	2.69	0.00	3.99	4.87	2.69	3.80	0.00	4.14	0.00	0.00	0.00	4.62	0.00	4.13	0.00	4.96	2.12	7.90	1.82	1.80	2.39	0.00	0.00
24	ER2d	ExonRegion	0	3.72	0.00	2.51	0.00	0.00	4.67	2.08	0.00	2.81	6.59	2.38	5.28	0.04	7.17	0.19	2.95	1.47	4.18	14.33	6.09	0.10	3.97	3.56	5.38	6.96	1.52	1.89	0.00	0.04
25	I2	Intron	0	14.15	2.27	5.06	3.61	2.95	7.62	2.23	2.41	4.46	4.08	1.56	4.19	0.42	9.24	9.64	7.22	8.43	7.64	3.70	4.92	2.16	1.54	0.82	19.62	5.55	3.72	0.37	2.22	1.55
26	I2_SR1	SilentIntronRegion	0	14.18	2.28	5.07	3.62	2.96	7.64	2.24	2.42	4.47	4.08	1.56	4.20	0.43	9.25	9.66	7.24	8.44	7.65	3.71	4.93	2.16	1.55	0.82	19.66	5.56	3.73	0.37	2.22	1.55
27	E3_Aa	NovelBoundary	0	11.15	0.00	4.01	0.00	0.00	3.91	2.12	0.00	1.25	1.72	1.49	3.07	0.00	8.29	15.95	14.76	3.60	9.50	0.00	13.65	0.00	4.33	0.00	21.95	0.00	0.00	0.00	5.53	0.00
28	ER3a	ExonRegion	0	10.88	0.38	4.47	4.64	0.67	8.27	0.62	2.76	1.25	1.00	3.64	2.45	0.62	5.95	12.60	4.62	3.06	5.09	3.13	5.51	1.70	2.95	1.84	10.63	6.05	2.69	3.87	0.72	1.26
29	E3_Ab	KnownBoundary	0	17.40	0.00	2.94	10.78	0.00	1.76	0.00	4.98	0.00	0.00	0.00	0.00	0.00	5.30	24.32	3.82	1.40	0.00	0.00	3.14	0.00	0.00	0.00	7.96	7.27	0.00	4.37	0.00	1.65
30	E3_Ac	KnownBoundary	0	25.30	7.37	30.17	0.00	5.31	13.43	10.87	3.78	18.88	10.59	20.85	24.13	9.62	23.75	0.00	17.21	12.70	14.13	0.00	6.20	4.53	36.37	33.83	27.16	8.45	23.86	15.01	10.69	7.49
31	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER3b	ExonRegion	0	67.73	21.68	80.56	29.25	35.87	58.01	32.25	25.04	46.96	51.98	49.27	67.53	30.66	103.58	67.21	79.97	35.06	90.06	5.43	38.79	22.25	103.48	80.65	140.69	52.89	95.24	67.03	18.26	24.70
33	ER3c	ExonRegion	0	72.68	30.46	78.39	28.59	39.17	58.99	35.09	25.78	51.38	43.84	44.90	76.07	36.61	105.30	46.33	82.71	38.07	90.06	2.67	32.96	20.94	96.45	72.08	121.34	40.48	73.94	52.70	26.23	29.34
34	ER3d	ExonRegion	0	77.82	32.23	76.87	16.71	28.83	82.20	31.07	20.14	62.12	55.37	25.91	86.83	33.86	106.83	45.01	76.33	41.35	82.67	15.69	36.60	24.88	121.90	63.17	139.89	50.00	74.70	40.75	26.12	42.77
35	E3_Db	NovelBoundary	0	2.77	4.17	6.55	0.00	5.60	7.64	0.00	4.08	1.16	0.00	0.00	1.45	0.00	4.90	0.00	10.25	5.33	0.00	0.00	0.00	0.00	7.00	0.00	14.59	7.08	0.00	0.00	0.00	3.04
36	E3b_E4a	KnownJunction	0	75.80	40.33	73.40	70.32	50.55	73.78	21.23	26.28	62.85	62.55	32.52	52.05	24.87	90.78	64.58	56.99	28.65	84.76	24.28	59.87	24.55	146.48	46.29	128.60	70.28	65.96	31.11	15.01	32.16
37	E3b_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.11	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	2.31	0.00	0.00	0.00	0.00	0.00	0.00
38	I3	Intron	0	6.15	0.49	2.52	1.08	5.16	3.11	0.91	1.11	4.06	1.52	1.26	2.05	0.59	4.78	5.40	4.39	4.05	4.07	0.48	0.00	1.72	0.82	0.82	8.44	5.39	0.47	0.83	0.49	1.82
39	I3_AR1	ActiveIntronRegion	0	6.47	0.53	2.68	0.66	4.53	3.37	1.00	1.22	4.39	1.67	1.34	2.21	0.65	5.12	5.64	4.63	4.25	4.38	0.53	0.00	1.76	0.88	0.90	8.94	5.68	0.52	0.91	0.43	2.00
40	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.11	0.00	0.00	3.20	0.00	1.36	1.27	0.00	1.75	8.57	0.00	2.00	0.00	0.00	0.00	0.00	0.00	2.02	2.87	7.27	0.00	0.00	0.00	0.00
41	E4_Ab	NovelBoundary	0	0.00	0.00	3.81	0.00	0.00	1.96	2.35	1.89	1.52	1.84	0.00	1.36	0.00	2.77	0.00	0.00	0.90	0.00	0.00	0.00	0.00	2.33	1.87	8.31	5.19	0.00	2.34	0.00	0.00
42	I3_AR2	ActiveIntronRegion	0	3.11	0.00	0.84	6.22	11.46	0.41	0.00	0.00	0.45	0.00	0.36	0.19	0.00	1.22	3.08	1.90	2.25	0.14	0.00	0.00	1.36	0.00	0.00	3.55	2.64	0.00	0.00	1.22	0.00
43	ER4a	ExonRegion	0	81.45	26.28	80.23	58.50	34.87	78.36	29.23	23.93	54.49	67.86	30.94	59.37	25.98	101.59	56.01	54.41	34.06	77.78	13.58	61.83	25.67	137.91	55.15	127.99	71.47	59.72	32.05	12.23	34.90
44	ER4b	ExonRegion	0	97.48	49.29	101.02	30.52	33.40	72.80	32.47	28.85	83.31	54.84	33.84	82.36	30.64	100.37	42.89	72.01	48.91	90.67	20.70	34.33	23.10	128.77	70.27	148.23	70.38	74.75	43.68	19.47	38.97
45	E4_Ac	KnownBoundary	0	86.35	66.99	90.67	36.45	13.71	67.76	24.26	23.69	96.66	60.12	24.99	78.01	28.05	126.80	99.46	56.69	65.14	113.15	24.28	38.04	26.31	126.36	49.99	208.34	102.40	68.66	51.78	11.19	41.46
46	ER4c	ExonRegion	0	97.82	63.91	94.02	32.80	25.81	97.39	32.44	22.32	115.08	79.84	30.83	95.47	42.12	143.95	75.18	73.16	61.59	109.00	38.13	34.15	32.29	152.36	64.88	212.96	111.66	103.30	65.55	14.13	46.20
47	E4_Da	KnownBoundary	0	2.65	0.00	1.49	0.00	0.00	1.73	0.00	0.00	4.32	0.00	0.00	2.98	0.00	1.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.78	0.00	0.00	0.00	0.00	0.00
48	E4a_E4d	KnownJunction	0	102.46	72.23	91.24	17.47	33.31	106.28	48.63	11.65	130.28	96.51	29.23	97.02	50.76	140.30	61.19	100.90	50.42	140.37	16.18	29.28	38.31	167.29	71.76	207.20	116.88	130.72	63.96	16.62	50.15
49	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E4_Db	KnownBoundary	0	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.40	2.61	2.19	0.00	0.00	5.67	0.00	0.00	3.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER4d	ExonRegion	0	2.14	0.00	5.61	0.00	0.00	5.50	0.00	0.00	4.49	1.44	0.00	7.42	2.60	7.26	0.00	0.00	7.01	19.10	0.00	2.81	1.43	0.00	0.00	15.06	2.86	0.00	0.00	0.00	1.34
52	ER4e	ExonRegion	0	13.00	5.29	5.48	3.85	0.42	4.60	1.34	1.20	3.39	4.77	1.39	4.15	2.83	7.28	3.71	4.85	5.50	10.43	0.38	2.84	1.52	3.36	1.07	10.08	5.48	1.17	0.71	3.91	1.51
53	E4_Ad	KnownBoundary	0	22.00	4.85	6.50	8.20	0.00	5.18	2.29	0.00	1.25	7.83	1.58	0.00	1.34	11.01	0.00	0.00	5.81	13.87	0.00	3.14	0.00	2.04	2.36	11.13	1.93	0.00	0.00	4.31	0.00
54	ER4f	ExonRegion	0	91.30	89.83	79.51	26.14	22.59	90.82	30.12	37.59	98.47	56.28	42.30	90.07	35.95	118.81	37.21	78.48	44.77	104.14	30.83	48.25	22.14	155.16	56.68	174.86	70.59	69.34	58.57	20.37	47.37
55	E4_Dc	NovelBoundary	0	11.21	3.78	1.17	0.00	0.00	3.91	0.00	0.00	1.16	2.00	0.00	1.17	0.00	5.07	0.00	0.00	2.66	4.62	0.00	3.06	1.56	0.00	0.00	2.99	1.74	2.02	0.00	0.00	0.00
56	E4c_E5a	KnownJunction	0	60.34	69.90	89.67	18.98	12.82	63.69	34.44	40.51	81.13	41.58	44.48	73.34	32.61	92.15	0.00	45.82	48.42	66.01	16.18	35.73	22.58	110.07	38.56	116.76	44.29	77.55	39.21	16.80	42.13
57	E4_Dd	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	7.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	E4_De	NovelBoundary	0	7.55	12.99	0.00	0.00	0.00	1.96	0.00	2.54	1.89	3.56	0.00	1.54	3.15	7.47	9.97	3.67	7.05	4.62	8.09	0.00	1.93	0.00	0.00	11.48	0.00	0.00	0.00	4.40	0.00
59	ER4g	ExonRegion	0	6.43	6.57	2.52	0.00	0.00	3.09	0.00	0.92	0.56	0.00	0.30	1.24	0.00	2.49	5.60	0.00	0.00	2.73	0.00	2.81	1.43	1.80	0.00	0.54	2.50	1.96	0.00	0.00	0.34
60	ER4h	ExonRegion	0	4.06	0.69	1.30	0.00	0.00	2.60	0.00	0.00	0.00	0.00	0.00	0.26	0.00	0.76	0.00	0.00	0.00	0.43	0.00	0.30	0.30	0.57	0.00	0.00	0.83	1.08	0.00	0.00	0.00
61	I4	Intron	0	18.83	3.60	3.47	0.87	5.36	5.20	2.21	1.57	4.85	3.88	0.29	6.31	0.48	12.59	8.55	6.96	7.10	8.78	1.95	3.70	1.91	4.84	0.44	19.42	9.94	2.88	3.58	2.98	2.04
62	I4_AR1	ActiveIntronRegion	0	18.92	3.62	3.48	0.88	5.39	5.22	2.22	1.58	4.88	3.89	0.29	6.34	0.48	12.65	8.59	7.00	7.14	8.82	1.96	3.72	1.92	4.86	0.44	19.52	9.98	2.89	3.59	3.00	2.05
63	E5_Aa	NovelBoundary	0	21.23	0.00	3.59	0.00	0.00	4.87	0.00	2.39	9.47	3.16	1.30	1.33	0.00	12.58	0.00	10.40	3.62	9.25	0.00	0.00	0.00	4.13	2.51	13.22	7.35	2.19	4.17	0.00	2.05
64	ER5a	ExonRegion	0	124.54	104.93	85.19	27.59	35.50	127.08	54.04	38.23	136.79	88.11	79.90	130.68	57.95	148.01	87.38	85.77	81.53	92.86	56.35	56.71	41.22	165.44	72.88	243.67	94.03	114.26	105.25	35.51	67.97
65	E5_Da	KnownBoundary	0	86.30	101.99	33.16	9.27	13.26	78.96	53.61	21.30	163.23	83.77	36.41	103.07	64.77	112.44	167.83	61.12	66.54	66.91	48.55	54.66	25.23	92.32	74.32	217.55	74.82	115.87	53.62	22.56	89.57
66	ER5b	ExonRegion	0	71.89	78.35	24.29	7.96	16.12	84.70	30.86	17.76	111.40	59.49	43.44	59.04	31.83	91.49	82.65	44.46	38.75	48.18	20.17	43.88	22.98	105.00	34.68	174.61	53.33	53.25	34.54	14.67	33.38
67	E5_Db	KnownBoundary	0	22.59	27.05	11.41	9.71	19.60	41.13	19.05	12.39	54.51	33.07	20.09	23.40	19.71	46.84	30.50	25.09	22.85	23.12	24.28	28.78	12.59	58.34	11.57	89.30	39.93	42.57	22.02	13.21	21.19
68	ER5c	ExonRegion	0	29.25	15.54	23.59	14.63	14.22	29.17	20.23	6.65	66.36	14.46	17.30	27.24	22.15	39.37	26.91	12.35	20.34	23.20	5.30	10.52	13.25	60.77	11.44	89.59	31.64	35.48	38.91	10.91	23.54