Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	KIAA1143	Gene	0	71.62	78.09	81.35	79.15	216.01	87.04	150.38	72.59	46.62	122.47	100.83	145.73	53.21	106.82	74.90	65.86	88.89	61.35	109.93	67.70	88.92	57.42	61.99	65.32	56.81	64.47	86.39	50.75	58.73
2	296121	Transcript	0	135.35	69.57	135.12	265.48	547.45	69.84	166.63	104.28	47.50	122.20	98.15	148.05	79.44	103.26	98.31	92.23	107.71	76.27	111.18	65.56	74.85	93.55	87.10	48.43	63.25	101.25	110.96	73.20	87.52
3	484437	Transcript	0	3.32	2.46	4.04	0.03	0.11	2.95	2.48	1.49	3.57	0.67	1.37	3.56	0.73	4.25	3.68	0.99	3.30	1.44	3.39	0.52	0.61	2.36	2.38	2.86	1.36	1.19	1.02	1.79	3.24
4	ER1a	ExonRegion	0	218.69	74.23	192.55	473.73	923.09	58.08	208.54	141.81	56.63	127.85	96.02	151.57	116.98	103.35	142.00	126.42	130.49	96.87	130.95	69.92	67.94	138.68	117.04	33.92	73.83	140.76	135.65	97.78	122.36
5	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.91	0.00	2.04	0.00	0.00	0.00	1.39	0.00	0.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	0	73.38	21.43	20.31	18.98	25.20	15.81	109.39	43.40	16.35	29.76	13.32	30.78	44.68	27.10	78.13	17.90	22.46	33.91	48.55	18.28	9.87	35.88	9.95	7.12	20.69	17.90	4.72	27.54	28.23
7	ER1b	ExonRegion	0	50.64	17.66	12.48	30.16	9.65	10.40	90.71	50.05	15.59	24.72	7.59	30.15	43.92	24.60	56.71	14.39	19.35	17.91	51.48	16.51	10.70	26.82	13.56	2.55	13.85	13.95	5.95	21.60	27.43
8	I1_AR1	ActiveIntronRegion	0	3.64	1.59	0.69	0.00	2.11	3.01	4.55	1.01	0.00	2.26	1.23	2.02	0.71	2.07	0.93	2.72	4.46	3.99	1.75	2.80	1.85	0.99	0.19	1.03	0.88	1.97	0.00	0.38	0.55
9	I1_AR2	ActiveIntronRegion	0	1.40	1.12	0.94	0.67	0.46	2.31	0.75	0.52	1.20	3.37	1.67	3.23	0.24	5.07	0.86	2.88	5.30	2.91	3.58	1.80	1.47	0.34	0.17	0.20	1.20	0.88	0.68	1.52	0.81
10	I1_SR2	SilentIntronRegion	0	0.00	3.28	0.00	0.00	0.00	0.82	3.59	0.00	0.67	2.57	0.71	0.00	0.00	1.34	2.74	1.47	2.66	2.28	1.89	1.63	0.00	0.00	0.00	1.28	0.85	0.00	0.00	0.00	0.00
11	I1_SR3	SilentIntronRegion	0	0.79	0.59	0.31	1.31	0.60	2.02	0.86	0.00	0.27	2.03	1.89	2.49	0.95	1.38	0.56	1.06	3.38	2.26	2.93	0.50	2.35	0.00	0.44	0.39	0.70	0.38	0.00	0.60	0.25
12	I1_AR5	ActiveIntronRegion	0	0.00	3.61	0.00	0.00	0.00	1.17	0.00	0.00	0.56	2.74	0.00	0.00	0.00	0.00	0.56	0.00	2.96	0.00	0.00	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	I1_AR6	ActiveIntronRegion	0	1.10	2.69	0.37	0.00	0.77	2.14	1.81	0.24	1.90	1.56	0.31	1.21	0.00	1.26	3.85	3.02	4.76	3.09	5.75	1.54	2.93	0.00	0.23	3.15	0.00	1.21	0.00	0.42	1.20
14	I1_SR4	SilentIntronRegion	0	0.99	1.80	0.26	0.00	2.24	3.31	0.00	0.10	1.65	2.71	0.00	3.26	0.00	3.19	3.08	3.59	3.46	3.48	5.37	0.43	0.80	0.00	1.39	2.79	1.60	0.71	0.00	2.31	0.00
15	I1_AR7	ActiveIntronRegion	0	2.04	2.36	0.61	3.95	1.76	2.07	1.10	0.64	2.56	2.77	0.87	1.82	0.00	2.62	0.00	4.41	2.76	4.64	2.34	1.38	1.83	0.00	1.54	2.09	1.05	0.92	0.00	1.64	0.25
16	E2_Aa	NovelBoundary	0	2.54	0.00	1.54	0.00	12.82	3.80	0.00	0.00	0.00	5.51	6.33	5.57	0.00	1.13	0.00	3.82	3.87	4.62	8.09	0.00	3.97	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00
17	ER2a	ExonRegion	0	310.24	193.27	22.46	34.50	139.00	135.83	413.48	197.88	128.11	221.21	149.04	172.26	194.13	166.18	259.68	185.02	135.40	146.98	267.59	148.73	161.12	178.65	126.77	102.91	128.23	122.18	63.59	68.61	129.70
18	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.52	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.61	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
19	E2a_E3a	KnownJunction	0	260.83	155.61	64.70	83.26	333.80	151.01	482.32	135.91	144.04	308.58	254.60	381.80	268.38	235.79	235.00	108.86	261.78	32.36	178.03	162.83	154.22	128.01	225.42	143.44	117.94	224.66	171.70	139.11	255.89
20	I2_AR1	ActiveIntronRegion	0	6.07	1.40	0.00	0.00	0.00	0.92	6.53	1.64	1.06	0.00	0.00	1.17	0.00	0.00	9.23	2.34	0.00	0.00	10.64	10.20	0.00	4.87	3.35	0.00	0.93	0.00	0.00	2.96	0.00
21	E3_Aa	NovelBoundary	0	8.02	9.31	10.66	9.49	21.07	8.63	7.78	0.00	6.40	11.62	6.14	1.51	1.50	4.52	18.14	0.00	10.11	0.00	16.18	15.46	5.29	4.33	2.36	25.60	3.52	1.93	10.04	4.58	4.99
22	ER3a	ExonRegion	1	277.68	345.06	176.52	362.54	888.27	253.54	594.33	113.24	193.18	267.90	154.70	249.61	192.90	220.14	391.67	157.45	173.25	143.40	466.88	201.03	276.24	151.03	124.82	158.69	125.00	73.56	130.70	84.44	133.31
23	E3_Da	KnownBoundary	1	238.30	519.56	22.92	307.15	471.59	343.70	617.69	121.63	342.93	298.51	143.02	231.59	173.81	262.25	628.45	195.84	155.88	224.62	525.79	294.08	437.40	155.67	118.69	181.96	116.27	45.19	99.69	20.94	170.81
24	E3a_E4a	KnownJunction	0	2.77	0.00	1.47	0.00	0.00	0.00	2.92	2.54	0.00	0.00	0.00	0.00	0.00	0.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER3b	ExonRegion	0	52.00	64.90	77.70	57.23	171.81	81.61	124.71	66.74	38.38	116.55	100.28	144.53	41.91	103.18	54.61	58.04	84.92	55.66	91.40	61.20	81.75	48.42	57.16	62.94	52.67	61.74	86.27	48.61	52.69
26	E4_Aa	NovelBoundary	0	0.00	7.17	0.00	0.00	0.00	3.38	0.00	0.00	13.55	2.04	1.52	1.84	0.00	6.89	0.00	3.67	12.29	0.00	8.09	0.00	1.68	7.29	0.00	12.74	3.64	2.06	4.08	3.95	0.00
27	ER4a	ExonRegion	0	3.86	4.92	6.60	0.05	0.22	5.90	2.05	0.44	7.14	1.34	2.75	7.12	1.47	7.57	7.36	1.98	6.60	2.89	6.77	1.05	1.22	2.49	4.76	5.72	2.72	2.39	2.05	3.58	6.48
28	IG25	Intergenic	0	1.75	2.63	2.73	0.00	1.99	2.24	2.47	0.00	4.34	1.78	0.00	2.26	2.37	4.44	1.88	1.01	3.65	2.36	1.30	2.25	1.75	0.74	2.95	3.51	2.92	1.92	1.49	2.00	1.91
29	IG25_SR1	SilentIntergenicRegion	0	1.76	2.65	2.75	0.00	2.01	2.26	2.49	0.00	4.38	1.79	0.00	2.27	2.37	4.48	1.90	1.02	3.68	2.38	1.31	2.27	1.76	0.74	2.97	3.54	2.94	1.94	1.51	2.01	1.93