Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TCTA	Gene	0	247.96	84.82	237.46	177.81	258.97	122.20	250.52	144.86	124.05	129.01	104.20	217.27	75.78	88.69	125.59	216.86	321.48	145.91	83.33	198.96	77.91	205.23	142.90	144.05	155.60	125.29	95.86	155.67	113.40
2	273590	Transcript	0	178.80	71.29	187.77	135.70	189.12	96.13	195.06	113.54	116.20	102.54	81.17	185.24	63.78	67.18	94.57	156.90	262.29	103.45	68.21	142.48	61.97	158.34	105.41	123.67	122.83	102.33	79.51	128.10	98.10
3	488385	Transcript	0	15.27	5.33	4.96	2.37	3.75	9.83	20.16	11.49	9.22	13.28	2.75	10.12	0.40	9.28	25.49	22.65	82.35	17.39	6.79	31.23	6.56	2.95	1.57	9.29	5.34	3.64	0.61	4.66	3.59
4	487432	Transcript	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.00	0.00	1.54	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00
5	482193	Transcript	0	0.00	0.00	0.00	0.00	0.00	9.32	5.84	0.00	1.89	2.04	0.00	0.00	0.00	4.63	0.00	0.00	5.11	4.62	0.00	0.00	0.00	4.86	1.92	0.00	6.67	0.00	0.00	0.00	0.00
6	493381	Transcript	0	2.65	0.00	2.99	0.00	0.00	0.00	2.57	0.00	0.00	2.04	0.00	6.14	3.25	1.37	0.00	14.38	4.88	0.00	24.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.31	0.00
7	497786	Transcript	0	0.00	4.56	2.92	10.35	0.00	0.00	0.00	2.29	0.00	7.67	1.46	0.00	1.72	1.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	3.86	0.00	0.00	6.74	0.00
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.56	0.00	0.00	0.00	0.00	0.78	0.00	2.41	0.00	1.29	0.00	0.00	0.00	0.00	1.57	0.00	0.00
9	ER1b	ExonRegion	0	10.61	1.07	22.82	23.71	93.12	13.39	10.39	3.79	4.05	10.30	9.58	6.94	8.47	6.41	9.63	14.92	11.82	12.31	3.40	10.95	3.52	25.13	16.26	2.18	9.30	9.76	5.42	10.90	7.54
10	E1_Ac	KnownBoundary	0	4.90	0.00	9.52	10.78	40.97	5.45	5.44	0.00	4.57	3.40	3.16	4.58	3.15	4.92	7.37	10.40	1.40	9.25	0.00	0.00	0.00	16.38	4.83	2.51	3.67	2.19	0.00	0.00	5.05
11	E1_Ad	KnownBoundary	0	23.48	0.00	1.54	53.71	163.29	11.05	14.19	9.90	1.43	5.95	0.00	18.46	0.00	4.96	0.00	14.69	2.79	23.12	0.00	15.96	8.10	37.78	21.92	3.05	9.66	2.19	0.00	6.69	3.24
12	ER1c	ExonRegion	0	31.16	4.55	25.55	46.13	200.03	19.09	29.15	15.30	16.51	8.11	4.53	33.78	14.49	11.65	1.08	36.99	11.17	42.93	15.84	27.67	13.88	50.06	29.84	7.61	12.20	8.58	5.00	8.84	11.87
13	E1_Ae	KnownBoundary	0	3.01	0.00	0.00	0.00	0.00	5.87	0.00	0.00	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	2.19	0.00	0.00	3.37
14	E1_Af	KnownBoundary	0	58.28	28.50	55.76	51.12	168.00	38.29	55.90	20.85	21.16	26.68	15.25	53.16	28.21	11.10	9.97	96.08	76.55	55.48	16.18	37.05	26.79	43.37	20.00	14.54	23.07	51.24	2.24	51.00	23.64
15	ER1d	ExonRegion	0	55.49	21.53	43.89	52.81	337.64	36.51	62.04	32.73	32.58	11.71	10.05	52.22	29.88	16.93	1.87	86.61	29.16	73.69	37.72	59.96	30.11	71.11	39.78	17.69	21.12	21.65	9.16	17.21	17.75
16	ER1e	ExonRegion	0	75.27	33.24	72.93	79.58	351.35	49.41	89.88	43.86	37.01	27.09	17.71	80.76	36.07	20.49	21.08	143.66	75.13	101.62	47.12	71.42	41.20	73.28	46.48	22.78	31.36	48.63	12.17	55.04	32.21
17	ER1f	ExonRegion	0	137.10	48.86	131.51	123.53	172.28	72.91	195.34	107.51	45.16	66.89	42.55	130.38	55.01	45.13	63.62	195.01	223.71	119.08	40.33	148.26	57.38	134.64	95.86	53.66	71.22	91.37	42.75	105.92	62.86
18	E1_Da	KnownBoundary	0	2.54	4.85	1.49	0.00	0.00	3.68	32.67	2.29	6.00	5.63	3.10	8.86	0.00	3.35	0.00	7.34	19.22	0.00	8.09	14.47	7.90	11.04	0.00	2.87	0.00	3.91	0.00	12.18	3.66
19	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	9.32	5.84	0.00	1.89	2.04	0.00	0.00	0.00	4.63	0.00	0.00	5.11	4.62	0.00	0.00	0.00	4.86	1.92	0.00	6.67	0.00	0.00	0.00	0.00
20	E1a_E2b	KnownJunction	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.00	0.00	1.54	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00
21	E1a_E2c	KnownJunction	0	216.95	84.35	108.83	31.49	192.17	133.37	470.42	132.97	66.42	169.73	91.01	225.42	85.57	87.54	190.15	417.22	342.57	209.98	104.98	235.61	113.35	132.24	149.47	110.36	172.72	120.80	24.20	204.08	101.19
22	ER1g	ExonRegion	0	4.43	1.87	3.48	6.00	4.77	1.71	11.90	3.10	1.62	6.09	0.93	6.85	2.28	3.78	3.49	5.37	8.99	3.72	3.60	5.74	2.03	2.97	1.48	2.96	3.05	3.64	2.92	7.07	0.99
23	E1_Db	NovelBoundary	0	2.71	4.65	2.84	8.41	0.00	0.00	0.00	4.48	1.83	0.00	0.00	0.00	0.00	1.79	0.00	0.00	12.06	4.62	0.00	10.17	1.80	4.76	0.00	0.00	0.00	4.16	0.00	0.00	0.00
24	E1b_E2a	KnownJunction	0	0.00	4.56	2.92	10.35	0.00	0.00	0.00	2.29	0.00	7.67	1.46	0.00	1.72	1.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	3.86	0.00	0.00	6.74	0.00
25	E1b_E2c	KnownJunction	0	2.65	0.00	2.99	0.00	0.00	0.00	2.57	0.00	0.00	2.04	0.00	6.14	3.25	1.37	0.00	14.38	4.88	0.00	24.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.31	0.00
26	Ix	Intron	0	3.80	0.00	1.48	0.00	0.00	0.00	3.58	0.82	1.00	1.92	0.53	0.56	0.58	1.40	0.00	0.00	1.99	4.27	1.42	4.55	0.00	0.00	0.00	2.86	0.00	0.00	0.00	1.45	0.00
27	Ix_AR1	ActiveIntronRegion	0	3.84	0.00	1.50	0.00	0.00	0.00	3.61	0.82	1.01	1.94	0.53	0.56	0.58	1.42	0.00	0.00	2.00	4.31	1.43	4.59	0.00	0.00	0.00	2.89	0.00	0.00	0.00	1.46	0.00
28	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.73	2.92	0.00	1.13	0.00	0.00	5.84	0.00	1.86	0.00	2.83	2.79	0.00	0.00	0.00	1.48	2.38	2.51	0.00	1.89	0.00	0.00	2.16	0.00
29	E2_Ab	NovelBoundary	0	0.00	0.00	2.04	0.00	7.22	0.00	4.63	0.00	1.25	1.64	1.20	4.46	1.31	2.24	0.00	0.00	4.21	0.00	0.00	3.39	0.00	0.00	3.99	7.18	4.62	0.00	0.00	2.25	1.35
30	ER2a	ExonRegion	0	0.71	3.28	3.49	7.31	3.32	6.87	10.53	2.45	3.12	9.14	1.32	1.51	1.30	5.95	0.00	0.28	7.46	3.34	0.50	2.81	0.00	5.01	6.03	7.89	7.15	0.00	0.00	5.07	1.49
31	ER2b	ExonRegion	0	14.18	1.57	10.11	0.89	9.66	3.01	18.90	9.01	3.37	8.94	2.80	7.61	1.30	9.62	3.65	6.89	23.90	9.04	1.50	15.28	4.04	7.89	4.17	9.73	8.40	7.65	0.38	9.89	2.18
32	E2_Ac	KnownBoundary	0	8.38	0.00	5.41	10.78	7.07	3.57	17.85	7.17	1.55	13.50	0.00	4.58	0.00	8.75	8.97	3.82	18.26	13.87	8.09	11.25	0.00	2.33	2.12	11.25	6.90	0.00	0.00	7.05	0.00
33	ER2c	ExonRegion	0	250.15	51.16	163.10	108.34	283.95	92.33	352.46	175.07	56.74	135.93	102.81	262.93	96.51	101.30	139.39	298.95	466.52	208.17	85.91	226.42	57.66	175.40	204.63	119.75	144.18	178.82	75.40	230.92	121.09
34	E2_Da	KnownBoundary	0	18.76	4.17	5.28	0.00	0.00	0.00	8.41	5.08	2.59	4.07	0.00	9.49	0.00	4.03	0.00	7.57	76.26	9.25	0.00	18.94	3.53	9.77	0.00	7.84	0.00	0.00	0.00	15.14	0.00
35	E2a_E3a	KnownJunction	1	291.68	23.07	212.70	233.59	591.40	115.37	228.69	194.93	52.53	91.91	111.67	268.52	105.28	79.87	113.81	231.18	397.11	163.49	105.20	226.76	51.82	215.91	224.82	158.09	161.88	238.77	159.08	354.78	141.73
36	E2_Db	KnownBoundary	0	16.63	4.85	6.48	10.78	19.75	1.96	14.30	2.29	9.11	18.30	0.00	7.14	0.00	11.45	17.94	19.12	45.18	13.87	0.00	22.91	2.05	2.48	2.51	8.79	6.67	7.12	0.00	9.08	0.00
37	ER2d	ExonRegion	0	23.76	4.71	8.20	0.95	5.20	3.17	14.55	5.92	6.50	13.75	0.41	12.26	0.06	8.20	9.25	18.27	82.18	8.19	0.00	23.10	1.74	7.45	1.81	4.21	4.16	2.94	0.00	14.60	0.06
38	ER2e	ExonRegion	1	17.72	3.05	13.27	7.73	8.89	10.12	22.01	9.81	7.60	14.18	3.43	11.11	0.04	10.56	19.46	25.43	86.44	17.89	3.03	36.72	5.60	4.54	0.56	9.08	4.20	4.14	0.67	3.66	1.43
39	E2_Dc	KnownBoundary	0	16.99	0.00	4.21	0.00	6.93	3.49	30.38	6.52	15.17	12.10	0.00	12.41	0.00	11.96	51.82	25.55	122.32	18.49	8.09	33.16	4.05	4.42	2.41	14.06	7.58	0.00	0.00	1.98	4.32
40	ER2f	ExonRegion	0	15.27	5.33	4.96	2.37	3.75	9.83	20.16	11.49	9.22	13.28	2.75	10.12	0.40	9.28	25.49	22.65	82.35	17.39	6.79	31.23	6.56	2.95	1.57	9.29	5.34	3.64	0.61	4.66	3.59
41	E2_Dd	NovelBoundary	1	13.92	0.00	10.41	0.00	14.15	3.53	30.67	6.27	3.01	11.34	1.46	9.07	0.00	8.20	16.74	21.27	91.12	0.00	8.09	23.24	3.85	2.43	2.51	8.67	7.50	0.00	2.53	4.04	0.00
42	I2	Intron	1	22.30	8.14	8.70	2.91	3.96	9.38	20.29	8.08	7.65	12.87	1.69	5.08	1.14	5.84	22.36	22.91	55.96	15.18	6.04	25.42	8.09	1.46	0.61	8.86	4.34	2.44	0.12	4.95	2.22
43	I2_AR1	ActiveIntronRegion	0	8.04	0.00	0.12	0.00	8.54	2.45	4.61	3.09	2.09	3.66	0.98	1.46	0.00	1.94	11.60	3.80	11.56	4.97	5.50	13.45	1.43	0.00	0.00	5.30	1.84	0.00	0.00	2.10	0.62
44	I2_AR2	ActiveIntronRegion	1	20.15	14.42	13.07	8.15	6.93	8.99	19.06	6.68	1.89	16.82	1.50	7.30	1.50	5.17	24.64	24.49	53.72	17.13	10.47	31.85	8.56	0.00	0.00	8.79	3.48	3.05	0.89	5.00	1.71
45	I2_AR3	ActiveIntronRegion	1	25.96	10.19	10.11	3.82	5.47	8.76	20.60	9.68	8.36	12.62	1.52	5.30	1.35	7.91	24.78	27.71	65.60	18.82	4.75	29.84	9.04	2.24	1.10	9.24	4.77	2.76	0.00	5.42	2.20
46	I2_SR1	SilentIntronRegion	0	12.63	2.93	2.83	0.00	1.95	5.59	13.01	0.80	4.88	10.26	0.21	4.28	1.36	2.54	10.35	14.03	28.42	10.32	3.35	7.82	4.16	1.02	1.73	6.31	5.25	0.00	0.00	0.00	4.14
47	I2_AR4	ActiveIntronRegion	1	21.67	4.23	6.91	0.00	0.00	12.33	24.08	8.46	10.69	13.27	2.46	4.39	0.74	4.16	21.54	19.31	54.18	10.92	6.61	20.64	8.19	1.24	0.00	9.39	4.26	2.53	0.00	5.62	2.30
48	E3_Aa	NovelBoundary	0	29.02	0.00	15.57	47.88	34.48	22.10	39.59	19.26	15.20	23.97	7.24	13.04	0.00	10.15	24.12	41.92	118.06	13.87	0.00	53.18	15.40	0.00	0.00	24.82	5.99	6.82	0.00	10.74	13.21
49	ER3a	ExonRegion	0	424.66	112.29	381.05	272.27	395.41	169.32	340.15	223.29	129.74	176.76	156.96	285.43	97.99	139.31	184.69	327.33	420.42	242.67	117.08	327.65	93.19	326.89	221.00	188.94	241.30	149.22	138.99	195.44	147.45
50	E3_Da	KnownBoundary	0	1590.01	1105.23	2335.67	1182.86	1325.16	1400.11	1376.76	1195.68	2559.53	1381.48	894.50	1693.25	1391.69	1596.69	1520.01	1244.86	4713.73	140.76	86.99	1057.72	1423.80	1049.36	820.80	1314.56	1064.88	1437.54	906.38	1779.20	1411.49
51	ER3b	ExonRegion	0	374.84	107.66	259.55	248.63	329.18	186.03	314.99	132.76	138.03	191.80	170.23	194.25	71.35	116.03	202.38	284.50	249.34	166.33	100.87	259.41	135.64	242.56	216.04	180.59	208.44	173.78	130.61	185.60	108.41
52	E3_Db	KnownBoundary	0	478.61	316.06	313.73	383.07	400.26	330.50	412.00	269.03	399.99	488.97	215.30	282.68	177.15	242.35	706.59	450.88	408.77	231.17	137.57	372.64	424.41	346.16	288.11	355.30	316.53	432.92	238.40	360.93	187.55
53	ER3c	ExonRegion	0	357.59	142.59	375.54	271.40	378.23	192.25	390.11	227.07	232.39	203.85	162.34	370.49	127.01	134.35	189.15	313.80	524.57	206.12	136.41	282.55	123.94	315.39	210.82	247.35	245.67	204.65	157.45	256.19	196.19
54	IG45	Intergenic	0	1.09	0.00	2.26	0.00	0.82	2.32	1.70	0.62	3.78	2.68	0.40	3.01	0.77	1.61	2.63	1.26	10.08	4.72	1.62	5.53	2.65	2.44	1.83	2.91	0.97	1.06	0.93	3.30	1.92
55	IG45_SR1	SilentIntergenicRegion	0	1.38	0.00	2.77	0.00	0.00	2.73	1.71	0.52	5.26	2.91	0.34	3.35	0.74	1.62	3.95	2.04	10.88	5.67	1.81	6.01	2.99	2.49	2.05	2.70	1.21	1.34	1.56	2.22	2.58
56	IG45_SR2	SilentIntergenicRegion	0	1.02	0.00	2.31	0.00	3.72	1.97	2.92	0.33	2.45	3.19	0.27	3.42	1.28	1.58	0.84	0.00	12.80	3.10	2.43	7.17	2.77	3.31	1.65	4.05	0.85	0.56	0.00	6.42	1.40
57	IG45_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	1.03	0.21	1.50	0.42	0.90	0.89	1.00	0.27	1.74	0.00	0.00	2.96	3.47	0.00	1.52	1.01	0.60	1.54	1.84	0.36	0.88	0.00	2.72	0.00