Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP11-884K10.1	Gene	0	375.84	222.89	237.95	563.91	701.67	148.14	1220.75	389.14	226.07	221.06	152.17	150.14	162.35	103.67	474.76	131.27	156.20	116.86	363.19	327.01	141.96	332.91	145.98	242.35	207.17	132.80	137.20	155.55	138.10
2	495461	Transcript	0	29.85	39.52	18.97	56.40	102.81	28.61	149.02	30.42	34.40	24.39	25.82	19.04	13.11	13.00	44.05	13.70	15.38	16.96	52.33	40.02	25.70	22.67	13.51	28.99	18.51	11.19	17.37	10.75	9.84
3	485414	Transcript	0	0.02	0.02	0.15	4.21	0.17	0.67	5.47	6.02	0.04	2.38	0.02	0.74	0.02	0.02	0.07	0.04	0.08	0.06	0.04	0.03	0.00	0.04	0.03	0.01	0.03	0.85	0.03	0.06	0.04
4	488746	Transcript	0	2.24	4.46	0.00	0.00	0.00	0.00	25.12	7.61	1.89	3.56	0.00	1.23	3.28	0.82	35.08	0.00	3.76	4.62	24.28	0.00	0.00	1.99	4.14	0.00	3.64	1.80	0.00	11.23	1.35
5	231908	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	487571	Transcript	0	1.93	1.54	0.43	0.00	8.16	2.13	1.80	0.00	0.50	2.43	0.37	1.90	0.25	0.36	2.48	0.87	1.53	1.48	1.64	0.25	1.10	0.00	0.23	0.83	0.31	0.00	0.00	0.00	0.28
7	IG22_AR1	ActiveIntergenicRegion	0	1.61	0.00	0.48	1.69	19.12	0.00	2.14	0.87	0.40	1.47	0.16	1.51	0.00	0.11	3.47	1.75	0.00	0.91	0.75	3.62	0.84	0.00	0.21	0.25	0.51	1.67	0.00	0.39	0.00
8	ER1a	ExonRegion	0	2.58	3.89	1.08	16.95	27.16	1.35	7.52	2.46	0.04	0.72	0.05	0.00	0.95	0.03	4.95	3.65	0.04	6.98	2.61	5.43	0.00	3.17	1.13	1.05	0.05	0.00	1.27	0.92	1.56
9	E1_Ab	KnownBoundary	0	0.00	4.85	4.63	37.53	47.60	0.00	10.87	2.49	1.58	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.86	0.00	2.43	4.78	0.00	0.00	0.00	4.77	0.00	5.61
10	E1_Ac	KnownBoundary	0	0.00	0.00	1.45	9.49	22.11	0.00	22.54	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	3.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.60	6.78	0.00
11	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ae	KnownBoundary	0	34.92	15.80	60.49	205.77	230.49	39.17	201.28	58.47	15.17	14.18	7.15	14.40	20.32	8.31	23.52	20.35	15.91	36.86	32.37	39.03	25.07	36.22	29.60	13.58	15.87	11.80	16.65	36.21	6.04
13	ER1b	ExonRegion	0	31.29	12.98	23.51	107.86	169.62	9.21	96.76	29.09	3.71	10.68	8.09	7.17	7.66	3.63	17.92	19.36	1.50	30.57	41.41	21.92	7.77	24.97	22.51	3.87	6.36	0.47	17.58	7.17	5.17
14	ER1c	ExonRegion	0	59.71	22.99	73.90	273.70	374.33	37.51	232.10	70.75	16.85	18.77	19.38	19.44	24.12	9.20	55.21	37.24	19.75	74.86	105.39	66.65	23.84	53.57	38.75	16.29	22.67	16.61	41.86	45.41	10.55
15	ER1d	ExonRegion	1	88.60	38.32	120.06	438.76	753.87	48.11	333.94	92.05	24.72	38.98	36.50	36.28	29.88	13.30	97.08	45.55	48.42	113.72	188.58	103.06	38.04	74.51	57.86	48.76	40.02	26.19	97.07	85.31	16.55
16	ER1e	ExonRegion	0	1008.77	514.46	1430.79	4237.38	5051.58	541.04	4865.07	993.62	639.94	724.06	455.21	536.71	538.78	202.10	1349.35	559.89	604.89	407.90	1022.41	842.84	509.86	934.16	647.48	420.01	597.07	688.21	729.83	858.82	558.94
17	E1_Da	NovelBoundary	0	5.31	0.00	5.33	0.00	0.00	3.84	5.49	0.00	0.00	0.00	3.23	0.00	0.00	2.10	9.17	0.00	0.00	10.79	8.09	0.00	2.05	1.99	0.00	0.00	0.00	4.38	0.00	5.98	0.00
18	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	10.78	0.00	0.00	5.84	7.61	0.00	6.03	0.00	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
19	E1a_E3a	KnownJunction	0	1207.61	947.30	2439.97	5989.12	6023.07	1134.57	12727.72	1394.64	1793.01	1612.76	996.84	938.39	1002.40	385.66	2690.02	541.38	1078.28	601.18	2443.48	1106.93	984.63	1104.00	1156.63	680.34	1057.00	1986.07	1003.09	2083.79	1108.20
20	E1a_E4a	NovelJunction	0	3.01	0.00	4.19	32.35	7.37	0.00	37.30	0.00	5.76	2.00	2.91	3.04	4.17	0.00	0.00	0.00	0.00	0.00	8.09	0.00	2.05	2.19	4.88	0.00	1.93	4.12	9.94	0.00	0.00
21	E1a_E5a	NovelJunction	0	5.78	0.00	3.09	21.57	6.93	0.00	11.50	0.00	0.00	2.04	0.00	2.83	3.09	1.22	8.37	0.00	1.08	0.00	0.00	0.00	2.05	0.00	0.00	0.00	3.75	2.19	0.00	0.00	1.25
22	E2_Aa	NovelBoundary	0	11.50	0.00	0.00	0.00	0.00	4.14	0.00	0.00	3.11	1.72	0.00	3.58	0.00	0.00	0.00	2.98	4.86	0.00	0.00	0.00	5.70	0.00	0.00	0.00	0.00	0.00	0.00	2.16	0.00
23	ER2a	ExonRegion	0	0.05	0.05	0.46	1.84	0.52	0.06	2.06	1.92	0.11	1.11	0.07	0.50	0.07	0.07	0.21	0.11	0.24	0.18	0.13	0.08	0.01	0.12	0.09	0.02	0.08	0.37	0.08	0.18	0.13
24	E2_Da	NovelBoundary	0	5.19	0.00	0.95	0.00	0.00	4.53	0.00	0.00	1.31	8.91	4.75	1.81	0.00	0.95	0.00	0.00	4.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	4.38	0.00	4.45	0.00
25	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	8.53	8.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	I2	Intron	0	4.49	0.56	0.29	0.00	0.00	1.68	0.70	0.00	1.66	2.78	1.04	1.29	0.45	0.95	3.38	0.00	0.78	3.70	2.79	0.96	1.25	0.00	0.00	2.25	1.00	0.55	0.00	1.99	0.58
27	I2_SR1	SilentIntronRegion	0	4.51	0.56	0.29	0.00	0.00	1.69	0.71	0.00	1.67	2.79	1.04	1.30	0.46	0.95	3.39	0.00	0.78	3.71	2.78	0.97	1.25	0.00	0.00	2.26	1.00	0.55	0.00	2.00	0.59
28	E3_Aa	NovelBoundary	0	8.79	4.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.00	0.00	5.96	0.00	0.00	0.00	0.00	1.01	0.00	16.18	0.00	0.00	0.00	0.00	0.00	1.70	0.00	0.00	0.00	1.72
29	ER3a	ExonRegion	0	702.70	324.65	985.73	1136.58	1240.80	344.63	3346.89	727.89	592.18	496.07	260.87	361.96	401.95	185.62	624.12	161.26	489.40	145.14	391.56	559.61	295.57	635.74	307.65	355.01	354.39	439.00	245.10	452.51	422.62
30	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.56	2.72	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.35
31	E3_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00
32	E3b_E4a	KnownJunction	0	1726.50	523.34	58.28	230.79	287.96	319.79	1227.03	1344.82	432.64	316.21	153.05	239.48	310.67	268.78	810.63	278.99	206.14	340.60	549.84	1319.88	327.10	1520.07	195.18	765.34	511.98	205.64	188.50	149.53	213.50
33	ER3b	ExonRegion	0	1594.74	597.85	65.64	215.72	264.02	401.40	1276.98	1436.04	412.89	313.30	152.33	225.11	315.66	261.23	674.87	303.69	209.36	289.29	470.69	1276.05	382.98	1443.09	188.06	724.94	549.58	203.53	152.02	165.45	218.77
34	ER3c	ExonRegion	0	1.93	1.54	0.43	0.00	8.16	2.13	1.80	0.00	0.50	2.43	0.37	1.90	0.25	0.36	2.48	0.87	1.53	1.48	1.64	0.25	1.10	0.00	0.23	0.83	0.31	0.00	0.00	0.00	0.28
35	E3_Dc	NovelBoundary	0	0.00	0.00	0.00	0.00	6.04	1.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.97	0.00	1.31	0.00	0.00	3.56	1.80	0.00	0.00	2.21	0.00	0.00	0.00	0.00	0.00
36	I3_SR2	SilentIntronRegion	0	5.16	5.13	0.00	0.00	3.89	0.77	2.30	0.00	0.00	2.30	0.71	0.99	0.00	0.00	0.00	1.90	0.27	1.54	9.19	0.00	0.00	0.00	0.00	1.48	2.97	0.17	0.00	0.00	0.46
37	E4_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.61	0.00	0.00	2.77	1.92	0.00	1.14	0.00	0.00	0.00	0.00	2.50	0.00	0.00	0.00	3.77	0.00	0.00	2.27	0.00	0.00	0.00	1.71	0.00
38	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.65	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
39	ER4a	ExonRegion	0	1763.11	983.05	105.19	299.12	323.50	859.07	5812.94	1926.06	1161.12	1057.87	558.61	570.03	750.40	425.23	2134.90	796.00	603.16	587.29	1634.52	1592.68	802.60	1530.87	608.33	1057.90	1104.47	561.65	378.10	601.95	594.71
40	E4_Da	NovelBoundary	0	6.02	9.31	0.00	0.00	0.00	3.91	5.66	0.00	0.00	3.60	2.59	1.42	0.00	0.00	8.37	0.00	1.10	0.00	0.00	0.00	1.85	0.00	0.00	2.87	1.93	0.00	0.00	0.00	0.00
41	E4a_E5a	KnownJunction	0	1142.61	957.68	143.88	305.42	349.86	847.65	9538.68	1326.76	1442.23	1317.84	824.56	891.91	1005.17	415.61	2969.66	654.52	1105.77	567.02	2329.51	997.10	808.42	910.60	890.39	967.46	1066.62	911.67	929.24	1097.32	1009.78
42	E4a_E5b	KnownJunction	0	2.24	4.46	0.00	0.00	0.00	0.00	25.12	7.61	1.89	3.56	0.00	1.23	3.28	0.82	35.08	0.00	3.76	4.62	24.28	0.00	0.00	1.99	4.14	0.00	3.64	1.80	0.00	11.23	1.35
43	I4	Intron	0	3.08	5.46	0.00	6.55	2.57	1.26	4.73	0.00	2.63	3.01	0.16	0.96	0.00	1.82	3.72	2.27	1.75	3.02	5.83	0.00	1.86	0.24	0.00	1.96	0.19	0.20	0.00	0.43	0.00
44	I4_SR1	SilentIntronRegion	0	3.14	6.73	0.00	8.99	4.12	1.15	5.90	0.00	1.87	3.32	0.25	1.29	0.00	1.42	5.00	1.56	1.87	2.42	7.35	0.00	2.68	0.00	0.00	1.80	0.30	0.33	0.00	0.00	0.00
45	I4_SR2	SilentIntronRegion	0	3.02	3.42	0.00	2.54	0.00	1.46	2.86	0.00	3.97	2.56	0.00	0.44	0.00	2.55	1.63	3.51	1.59	4.09	3.39	0.00	0.51	0.64	0.00	2.29	0.00	0.00	0.00	1.15	0.00
46	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.88	2.69	0.00	2.38	3.79	1.42	0.00	0.00	1.13	0.00	0.00	0.88	0.00	8.09	0.00	1.97	0.00	0.00	5.26	0.00	0.00	0.00	0.00	0.00
47	E5_Ab	NovelBoundary	0	334.03	170.15	73.27	126.18	173.60	76.74	4512.64	371.50	215.48	643.80	374.40	433.94	338.60	141.96	715.96	158.96	588.41	37.50	121.16	275.14	88.72	294.52	503.97	214.62	216.48	519.82	427.50	560.57	469.82
48	ER5a	ExonRegion	0	1171.53	813.20	166.32	304.69	411.81	733.62	10233.51	1419.27	1260.71	1452.11	918.37	948.83	1004.86	432.06	2561.97	605.97	1044.46	479.12	1906.38	975.62	700.04	971.48	1036.94	889.14	1008.00	1256.08	994.52	1382.64	1052.86
49	ER5b	ExonRegion	0	1108.86	585.51	638.37	673.80	1609.93	292.86	4841.75	1210.09	413.44	780.97	643.48	704.91	599.53	343.79	1467.22	347.91	790.82	303.11	992.14	792.83	267.47	924.78	686.42	684.70	533.49	773.18	804.09	1018.13	641.90
50	E5_Da	NovelBoundary	0	2.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	1.88	2.17	0.00	0.00	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	E5a_E6a	KnownJunction	0	1158.12	549.61	1344.06	1394.67	2655.34	283.31	2517.74	1484.62	297.34	405.21	278.29	387.31	372.71	323.66	1406.20	339.81	475.82	343.94	987.06	774.97	204.76	1163.17	292.64	667.18	473.75	207.23	337.25	293.63	196.27
52	I5	Intron	0	2.48	1.87	0.32	1.38	0.94	1.86	1.56	0.36	1.19	1.12	0.23	2.14	0.75	1.48	0.00	1.92	1.15	3.72	9.87	0.00	0.28	0.00	0.00	1.25	0.00	0.91	0.00	0.00	0.00
53	I5_SR1	SilentIntronRegion	0	2.96	1.14	0.00	0.76	1.73	2.57	2.13	0.65	0.59	2.05	0.42	2.83	0.95	1.38	0.00	1.90	1.59	1.67	9.99	0.00	0.47	0.00	0.00	2.24	0.00	1.11	0.00	0.00	0.00
54	I5_AR1	ActiveIntronRegion	0	1.99	2.86	0.74	2.23	0.00	1.05	0.89	0.00	2.00	0.00	0.00	1.37	0.53	1.68	0.00	2.02	0.66	6.46	10.15	0.00	0.05	0.00	0.00	0.00	0.00	0.70	0.00	0.00	0.00
55	E6_Aa	NovelBoundary	0	2.60	0.00	3.56	10.78	0.00	3.49	2.80	0.00	0.00	4.07	0.00	5.60	0.00	2.26	0.00	0.00	1.22	9.25	8.09	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	0.00
56	ER6a	ExonRegion	0	1256.59	679.96	760.90	2078.36	2299.78	304.91	2338.86	1307.08	564.87	565.98	394.90	345.34	420.52	353.79	1526.71	342.18	328.16	334.98	1143.98	1029.74	313.78	1161.76	318.03	847.82	627.92	186.70	253.97	215.11	276.87
57	E6_Da	KnownBoundary	0	710.18	492.90	122.46	908.06	868.17	228.63	1816.17	600.28	554.81	412.72	215.94	190.30	280.68	170.94	1202.89	206.16	191.96	220.64	801.15	831.46	254.62	589.29	256.49	585.77	385.18	83.81	226.22	102.31	213.50
58	ER6b	ExonRegion	0	412.27	344.46	159.98	525.79	660.23	161.75	1233.88	319.66	377.67	218.65	172.91	137.98	199.06	105.07	719.93	124.78	100.57	158.48	489.95	494.68	187.86	341.00	145.56	382.65	277.57	40.36	154.88	74.26	166.62
59	E6_Db	KnownBoundary	1	83.23	138.74	53.77	216.12	297.40	103.36	656.31	65.74	202.27	103.66	116.26	76.26	52.38	39.17	187.96	49.42	38.20	37.76	185.45	157.29	118.49	52.94	62.01	93.37	49.67	18.28	48.50	22.60	26.05
60	ER6c	ExonRegion	0	57.12	75.15	36.85	95.85	178.46	55.88	290.53	58.38	68.76	48.06	51.59	38.09	25.27	25.96	83.14	23.74	30.71	26.94	102.05	74.61	51.40	42.16	25.88	56.92	36.96	22.38	33.47	20.58	18.13